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Aldoshin SM, Bozhenko KV, Utenyshev AN, Sanina NA, Emel'yanova NS. Formation of supramolecular synthons in the crystalline structure of the dinitrosyl iron complexes with aliphatic thiourea ligands. J Mol Model 2020; 26:330. [PMID: 33150462 DOI: 10.1007/s00894-020-04594-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2020] [Accepted: 10/28/2020] [Indexed: 11/28/2022]
Abstract
By means of quantum-chemical calculations using Density Functional Theory, Quantum Theory of Atoms in Molecules, and Natural Bond Orbitals, theoretical modeling of intermolecular interactions has been performed for eight nitrosyl iron complexes with aliphatic thiourea ligands, which was aimed at discovering the presence of the NO…NO intermolecular interactions and at studying the possibility of the NO…NO supramolecular synthon formation in their crystalline structure for explaining their unusual magnetic properties. Such interactions were shown to be either stacking or T-like interactions, depending on the relative position of nitrosyl ligands and energetically corresponding to Van der Waals bonds. Mainly LP(O), π (NO), and π*(NO) orbitals in various combinations participate in their formation, with π (FeN), π(FeО), and LP(N) orbitals hardly being participants. The involvement of the NO bond orbitals results in quenching the orbital moment of the NO groups. If NO groups are isolated from intermolecular interactions, they can preserve the unquenched orbital moment.
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Affiliation(s)
- S M Aldoshin
- Institute of Problems of Chemical Physics of the Russian Academy of Sciences (IPCP RAS), 142432 Chernogolovka Region, prosp. Acad. Semenova, 1, Moscow, Russian Federation.,Faculty of Fundamental Physicochemical Engineering, Moscow State University, Leninskie Gori, 1, Moscow, Russian Federation, 119991
| | - K V Bozhenko
- Institute of Problems of Chemical Physics of the Russian Academy of Sciences (IPCP RAS), 142432 Chernogolovka Region, prosp. Acad. Semenova, 1, Moscow, Russian Federation.,Faculty of Fundamental Physicochemical Engineering, Moscow State University, Leninskie Gori, 1, Moscow, Russian Federation, 119991
| | - A N Utenyshev
- Institute of Problems of Chemical Physics of the Russian Academy of Sciences (IPCP RAS), 142432 Chernogolovka Region, prosp. Acad. Semenova, 1, Moscow, Russian Federation
| | - N A Sanina
- Institute of Problems of Chemical Physics of the Russian Academy of Sciences (IPCP RAS), 142432 Chernogolovka Region, prosp. Acad. Semenova, 1, Moscow, Russian Federation.,Faculty of Fundamental Physicochemical Engineering, Moscow State University, Leninskie Gori, 1, Moscow, Russian Federation, 119991.,Scientific and Educational Center "Medical Chemistry" of Moscow State Regional University, 141014 Mytishchi Region, st. Vera Voloshina, 24, Moscow, Russian Federation
| | - N S Emel'yanova
- Institute of Problems of Chemical Physics of the Russian Academy of Sciences (IPCP RAS), 142432 Chernogolovka Region, prosp. Acad. Semenova, 1, Moscow, Russian Federation. .,Faculty of Fundamental Physicochemical Engineering, Moscow State University, Leninskie Gori, 1, Moscow, Russian Federation, 119991.
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Emel´yanova NS, Shmatko NY, Sanina NA, Aldoshin SM. Quantum chemical modeling of possible reactions of mononuclear iron nitrosyl complex [Fe(SC(NH2)2)2(NO)2]Cl•H2O in an aqueous solution. Russ Chem Bull 2018. [DOI: 10.1007/s11172-017-1955-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Ananyev IV, Medvedev MG, Aldoshin SM, Eremenko IL, Lyssenko KA. Vibrational smearing of the electron density as function of the strength and directionality of interatomic interactions: nonvalent interactions of a nitro group within an island-type crystal [Fe(NO)2(SC6H4NO2)]2. Russ Chem Bull 2017. [DOI: 10.1007/s11172-016-1474-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Lyssenko KA, Ananyev IV, Aldoshin SM, Sanina NA. Features of chemical bonding within the Fe(NO)2 fragment for crystalline bis(thiosulfate) tetranitrosyl diiron tetramethylammonium salt as an example according to high-resolution X-ray diffraction data. Russ Chem Bull 2016. [DOI: 10.1007/s11172-015-1163-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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Sanina N, Kozub G, Kondratéva T, Korchagin D, Shilov G, Emelýanova N, Manzhos R, Krivenko A, Aldoshin S. Synthesis, structure, NO-donor and redox activity of bis-(2-methylfuranethiolate)tetranitrosyl diiron. J Mol Struct 2014. [DOI: 10.1016/j.molstruc.2014.06.024] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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Sanina N, Kozub G, Zhukova O, Emel’yanova N, Kondrat’eva T, Korchagin D, Shilov G, Ovanesyan N, Aldoshin S. Synthesis, structure, NO donor activity of iron–sulfur nitrosyl complex with 2-aminophenol-2-yl and its antiproliferative activity against human cancer cells. J COORD CHEM 2013. [DOI: 10.1080/00958972.2013.848980] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- N.A. Sanina
- Russian Academy of Sciences Institute of Problems of Chemical Physics, Chernogolovka, Russian Federation
| | - G.I. Kozub
- Russian Academy of Sciences Institute of Problems of Chemical Physics, Chernogolovka, Russian Federation
| | - O.S. Zhukova
- Russian Academy of Medical Sciences N.N. Blokhin Russian Cancer Research Center, Moscow, Russian Federation
| | - N.S. Emel’yanova
- Russian Academy of Sciences Institute of Problems of Chemical Physics, Chernogolovka, Russian Federation
| | - T.A. Kondrat’eva
- Russian Academy of Sciences Institute of Problems of Chemical Physics, Chernogolovka, Russian Federation
| | - D.V. Korchagin
- Russian Academy of Sciences Institute of Problems of Chemical Physics, Chernogolovka, Russian Federation
| | - G.V. Shilov
- Russian Academy of Sciences Institute of Problems of Chemical Physics, Chernogolovka, Russian Federation
| | - N.S. Ovanesyan
- Russian Academy of Sciences Institute of Problems of Chemical Physics, Chernogolovka, Russian Federation
| | - S.M. Aldoshin
- Russian Academy of Sciences Institute of Problems of Chemical Physics, Chernogolovka, Russian Federation
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Sárosi MB, Silaghi-Dumitrescu L, King RB. The neutral analogue of Roussin's red salt anion: a density functional study. Phys Chem Chem Phys 2012; 14:5998-6002. [DOI: 10.1039/c2cp40256d] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Shestakov AF, Shul’ga YM, Emel’yanova NS, Sanina NA, Rudneva TN, Aldoshin SM, Ikorskii VN, Ovcharenko VI. Experimental and theoretical study of the arrangement, electronic structure and properties of neutral paramagnetic binuclear nitrosyl iron complexes with azaheterocyclic thyolyls having ‘S–C–N type’ coordination of bridging ligands. Inorganica Chim Acta 2009. [DOI: 10.1016/j.ica.2008.11.009] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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