Fluctuating asymmetry in Robinia pseudoacacia leaves--possible in situ biomarker?

Assessment of halophyte plant phenotypic responses under heavy metals pollution. Implications for monitoring and phytoremediation

While phytoremediation is a highly valued practice to address local pollution problems, the use of early biomarkers of stress is useful for monitoring environments since they allow us to take measures before deleterious effects are irreversible. In this framework the goals are: to evaluate the pattern of leaf shape variation of Limonium brasiliense plants related to a metal soil gradient in the San Antonio salt marsh; to assess whether seeds from sites with different pollution levels show the same pattern of leaf shape variations under optimal growing conditions; and to compare the growth, the Pb accumulation pattern, and the leaf shape variation pattern of plants germinated from seeds originated in sites with different pollution levels in response to an experimental Pb rise. The results obtained from leaves collected in the field showed that the leaf shape changed depending on the soil metal levels. Plants germinated from seeds collected at the different sites expressed all the variation in leaf shape independently of the origin site, and the mean shape of each site was close to the consensus. Instead, when looking for the leaf shape components that maximize the differences between the sites from a growth experiment exposed to an increase in Pb in the irrigation solution, the pattern of variation found in the field disappeared. That is, only plants from the polluted site did not show variations in leaf shape in response to Pb additions. Finally, Pb accumulation in the roots was highest in plants germinated from seeds from the site where the soil pollution is greater. That suggests that seeds of L. brasiliense from polluted sites are better to use in phytoremediation practices, specifically to stabilize Pb in its roots whilst plants from the non-polluted site are better to detect pollutant soils using the leaf shape as an early biomarker.

Crab carapace shape as a biomarker of salt marsh metals pollution

Coastal environmental pollution is a global problem that has been growing for decades. For this reason, different approaches have been sought to address and detect its environmental implications. Some organisms are considered bioindicators or biomonitors of contamination, which provide information about environmental quality. Previous studies used the crab Neoelice granulata (Brachyura, Varunidae) as bioindicator of the presence of metals by the analysis of soft tissues to evaluate physiological and molecular markers. However, the contaminant levels accumulated in these soft tissues have shown to be affected by seasonal variations, suggesting that environmental assessments based on soft tissue samples may be unreliable. Within this framework, we aimed to describe the crab body (carapace) variations related to a known soil metal gradient in a Patagonian salt marsh and to evaluate the use of the body shape as an alternative biomarker for monitoring the quality of salt marsh systems. We studied the carapace shape variations using geometric morphometrics (GM) based on a 2D structure with object symmetry. We observed symmetric and asymmetric components of carapace shape variation. While the latter was not found associated with a gradient of contamination by metals, the symmetric component responded to environmental changes; therefore, it could be considered a stress biomarker related to metal contamination. Consequently, we recommended using GM analysis because it is inexpensive, faster and non-seasonal and could be used on living organisms, avoiding destroying individuals to measure the environmental stress.

Radial and Bilateral Fluctuating Asymmetry of Iris pumila Flowers as Indicators of Environmental Stress

In this study we compared the biomonitoring potential of various types of flower asymmetry indices in Iris pumila (Dwarf Bearded Iris). We chose 197 naturally growing clones from the arid steppe habitat in the largest sandy area in Europe (Deliblato Sands Nature Reserve), and we transplanted two replicates of each clone to a polluted highway site with a heavy traffic flow. After a period of acclimatization, lower levels of photosynthetic pigment concentrations and higher stomatal density and specific leaf area in transplants verified that the chosen highway site was indeed more stressful and therefore suitable for estimation of the flower asymmetry biomonitoring potential. We analyzed radially and bilaterally symmetrical flower structures (radial fluctuating asymmetry (RA) and bilateral fluctuating asymmetry (FA)) on three perianth parts—falls, standards, and styles—and calculated various asymmetry indices based on linear and geometric morphometrics. Despite utilizing a heavily polluted environment and fairly large sample sizes, only one asymmetry index was significantly higher on the polluted site with demonstrated stressful effects on utilized plants, indicating that flower asymmetry was not an efficient method for biomonitoring in the case of I. pumila RA and FA indices.

Phenotypic variation as an indicator of pesticide stress in gudgeon: Accounting for confounding factors in the wild

The response of organisms to environmental stress is currently used in the assessment of ecosystem health. Morphological changes integrate the multiple effects of one or several stress factors upon the development of the exposed organisms. In a natural environment, many factors determine the patterns of morphological differentiation between individuals. However, few studies have sought to distinguish and measure the independent effect of these factors (genetic diversity and structure, spatial structuring of populations, physical-chemical conditions, etc.). Here we investigated the relationship between pesticide levels measured at 11 sites sampled in rivers of the Garonne river basin (SW France) and morphological changes of a freshwater fish species, the gudgeon (Gobio gobio). Each individual sampled was genotyped using 8 microsatellite markers and their phenotype characterized via 17 morphological traits. Our analysis detected a link between population genetic structure (revealed by a Bayesian method) and morphometry (linear discriminant analysis) of the studied populations. We then developed an original method based on general linear models using distance matrices, an extension of the partial Mantel test beyond 3 matrices. This method was used to test the relationship between contamination (toxicity index) and morphometry (PST of morphometric traits), taking into account (1) genetic differentiation between populations (FST), (2) geographical distances between sites, (3) site catchment area, and (4) various physical-chemical parameters for each sampling site. Upon removal of confounding effects, 3 of the 17 morphological traits studied were significantly correlated with pesticide toxicity, suggesting a response of these traits to the anthropogenic stress. These results underline the importance of taking into account the different sources of phenotypic variability between organisms when identifying the stress factors involved. The separation and quantification of the independent effect of such factors provides an interesting outlook regarding the use of these evaluation metrics as indicators of ecosystem health.

How reproducible are the measurements of leaf fluctuating asymmetry?

Fluctuating asymmetry (FA) represents small, non-directional deviations from perfect symmetry in morphological characters. FA is generally assumed to increase in response to stress; therefore, FA is frequently used in ecological studies as an index of environmental or genetic stress experienced by an organism. The values of FA are usually small, and therefore the reliable detection of FA requires precise measurements. The reproducibility of fluctuating asymmetry (FA) was explored by comparing the results of measurements of scanned images of 100 leaves of downy birch (Betula pubescens) conducted by 31 volunteer scientists experienced in studying plant FA. The median values of FA varied significantly among the participants, from 0.000 to 0.074, and the coefficients of variation in FA for individual leaves ranged from 25% to 179%. The overall reproducibility of the results among the participants was rather low (0.074). Variation in instruments and methods used by the participants had little effect on the reported FA values, but the reproducibility of the measurements increased by 30% following exclusion of data provided by seven participants who had modified the suggested protocol for leaf measurements. The scientists working with plant FA are advised to pay utmost attention to adequate and detailed description of their data acquisition protocols in their forthcoming publications, because all characteristics of instruments and methods need to be controlled to increase the quality and reproducibility of the data. Whenever possible, the images of all measured objects and the results of primary measurements should be published as electronic appendices to scientific papers.