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Chen W, Zhao M, Zuo Q, Liu M, He X, Liu Y, Wang Z, Li H, Sun Y, Zhang Y. Understanding the insight into the mechanisms and dynamics of the OH-initiated oxidation of CHF 2CF 2OCHF 2 and the subsequent reactions in the presence of NO and O 2. J Mol Graph Model 2023; 122:108489. [PMID: 37084667 DOI: 10.1016/j.jmgm.2023.108489] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 04/01/2023] [Accepted: 04/07/2023] [Indexed: 04/23/2023]
Abstract
The mechanism and dynamics of CHF2CF2OCHF2 initiated by OH radical evaluated through the density functional theory and variflex code. The solvation pattern of PCM was utilized to analyze the influence of water on the CHF2CF2OCHF2 + OH reaction. The most feasible reaction channel is resulting in the product CF2CF2OCHF2 with H2O by hydrogen abstraction. The computed rate coefficient is consistent with the experimental data. The results turned out that aqueous water act as a disincentive to the title reaction. In the atmosphere, the computation results testified that OH, H2O, NH3 and HCOOH could not accelerate the degradation of the CHF2CF2OCHF2 through OH-initiated in view of the Gibbs free barriers. The research of the follow-up oxidation procedure of the products CHF2CF2OCF2 and CF2CF2OCHF2 with O2/NO reactions indicated that CF2O and CHF2 were the most feasible products. The atmospheric lifetimes of CHF2CF2OCHF2 were in the scope of 71.10-4.74 years in altitude of 0-12 km and at 200-300 K. This research supplies discernment into the conversion of CHF2CF2OCHF2 in a complex environment.
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Affiliation(s)
- Wanping Chen
- Key Laboratory of Photoinduced Functional Materials, Mianyang Normal University, Mianyang, 621000, PR China
| | - Meilian Zhao
- School of Public Health, Chengdu University of Traditional Chinese Medicine, Chengdu, PR China
| | - Qiwen Zuo
- Key Laboratory of Photoinduced Functional Materials, Mianyang Normal University, Mianyang, 621000, PR China
| | - Mingxing Liu
- Key Laboratory of Photoinduced Functional Materials, Mianyang Normal University, Mianyang, 621000, PR China
| | - Xinyu He
- Key Laboratory of Photoinduced Functional Materials, Mianyang Normal University, Mianyang, 621000, PR China
| | - Yushan Liu
- Key Laboratory of Photoinduced Functional Materials, Mianyang Normal University, Mianyang, 621000, PR China
| | - Zhiguo Wang
- Key Laboratory of Photoinduced Functional Materials, Mianyang Normal University, Mianyang, 621000, PR China
| | - Huirong Li
- Key Laboratory of Photoinduced Functional Materials, Mianyang Normal University, Mianyang, 621000, PR China
| | - Yuxi Sun
- Key Laboratory of Photoinduced Functional Materials, Mianyang Normal University, Mianyang, 621000, PR China
| | - Yunju Zhang
- Key Laboratory of Photoinduced Functional Materials, Mianyang Normal University, Mianyang, 621000, PR China.
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2
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Kuzhanthaivelan S, Sunitha S, Rajakumar B. Computational investigation of thermochemistry and kinetics of the reaction between n-butyl peroxy and hydroperoxyl radicals. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2022.140191] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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3
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Kuzhanthaivelan S, Rajakumar B. Kinetic investigation of the reaction of ethylperoxy radicals with ethanol. INT J CHEM KINET 2020. [DOI: 10.1002/kin.21441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- S. Kuzhanthaivelan
- Department of Chemistry Indian Institute of Technology Madras Chennai India
| | - B. Rajakumar
- Department of Chemistry Indian Institute of Technology Madras Chennai India
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4
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Kuzhanthaivelan S, Rajakumar B. Theoretical investigations on the kinetics of dimethoxymethane with peroxy radicals. Chem Phys Lett 2020. [DOI: 10.1016/j.cplett.2020.137846] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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5
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Holtomo O, Motapon O, Nsangou M. DFT Study of Photochemical Properties and Radiative Forcing Efficiency Features of the Stereoisomers cis- and trans-CHCl═CH-CF 3. J Phys Chem A 2019; 123:10437-10445. [PMID: 31697499 DOI: 10.1021/acs.jpca.9b08089] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
The accurate assessment of radiative forcing efficiency (RFE) of a greenhouse gas is based on the precise knowledge of its structure and infrared absorption spectrum. The present work investigates the UV-vis absorption spectra and IR absorption spectra that are used for the determination of RFE of the short-lived compounds, cis- and trans-CHCl═CHCF3 (CTFP). These investigations were carried out with six different density functional theory (DFT) methods B3LYP, CAM-B3LYP, M06, M06-2X, TPSS0, and ωB97X-D associated to the basis set 6-31G(3df). Therefrom, the relative populations of the two states cis and trans for temperatures over the range 220-370 K at 1 atm and along the atmospheric altitude were assessed. It turns out that trans-CTFP is the abundant component between the two states. This review reveals that B3LYP and M06 reproduce well the experimental results of UV-vis spectra of trans-CTFP. As for cis-CTFP, EOM-CCSD is not well fitted by DFT methods. The cis- to trans-CTFP isomerization leads to the red shift for DFT methods and to the blue shift in regard to EOM-CCSD and experimental results. The IR absorption spectra are well fitted by B3LYP over the range 500-1600 cm-1 and TPSS0 over 1300-2000 cm-1 for both stereoisomers. Moreover, the root-mean-square errors (RMSEs) of frequencies from experimental data are lower for B3LYP and TPSS0 for both systems. The computed IR absorption band strengths over 500-2000 cm-1 for cis- and over 600-1800 cm-1 for trans-CTFP are consistent with the experiment. The relevant descriptor RFEs of the climate effect were calculated using a narrow band model for a constant vertical profile and then corrected with a lifetime factor for different computational methods. The computed values correlate well with the experimental results for both stereoisomers except M06-2X and TPSS0. It is worth noting that, for both systems, the intense radiative forcing spectra are located at frequencies ranging in 1000-1200 cm-1. The lower forcings of trans-CTFP lying in the atmospheric window region 800-1000 cm-1 are greater than those of cis-CTFP. Therefore, RFE(trans-CTFP) = 1.127 RFE(cis-CTFP).
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Affiliation(s)
- Olivier Holtomo
- Department of Physics, Faculty of Science , University of Bamenda , P.O. Box 39, Bambili , Cameroon.,Department of Physics, Faculty of Science , University of Maroua , P.O. Box 814, Maroua , Cameroon
| | - Ousmanou Motapon
- Department of Physics, Faculty of Science , University of Maroua , P.O. Box 814, Maroua , Cameroon
| | - Mama Nsangou
- Department of Physics, Higher Teachers Training College , University of Maroua , P.O. Box 46, Maroua , Cameroon
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Li MY, Bai FY, Pan XM. Theoretical study of H-atom abstraction reactions from CH3CH2OCH2CH3, CHF2CF2OCH2CF3 and CF3CH2OCH3 by NO3 radical & subsequent degradation. J Mol Graph Model 2019; 93:107453. [DOI: 10.1016/j.jmgm.2019.107453] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2019] [Revised: 09/14/2019] [Accepted: 09/16/2019] [Indexed: 11/28/2022]
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7
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Paul S, Gour NK, Deka RC. Oxidation pathways, kinetics and branching ratios of chloromethyl ethyl ether (CMEE) initiated by OH radicals and the fate of its product radical: an insight from a computational study. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2019; 21:1519-1531. [PMID: 31274139 DOI: 10.1039/c9em00104b] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
The OH-initiated oxidation reactions of chloromethyl ethyl ether (CH2ClOCH2CH3) have been presented by using quantum calculation methods. The Minnesota functional (M06-2X) of the density functional theory method along with a polarization and diffuse 6-311++G(d,p) basis set is chosen for optimization and frequency calculations for H-abstractions from CH2ClOCH2CH3 molecules by OH radicals. Furthermore, the CCSD(T) method along with the same basis set is used for energy refinement of all optimized structures to obtain more accurate energies of the species. Our thermo-chemical calculation results show that the C˙HClOCH2CH3 product radical is more stable, corresponding to hydrogen atom abstraction from the -CH2Cl site, than others while the energy profile results indicate that the H-atom abstracted from the -OCH2 site follows the minimum energy path compared to other channels. The rate constants are computed using canonical transition state theory (CTST) within the temperature range of 250-450 K at 1 atm. The overall rate constant (at 298 K) for the abstraction reactions is found to be consistent with the earlier reported rate constant. The percentage branching ratios of different abstraction channels and the lifetime of chloromethyl ethyl ether are also given herein. We further investigated the unimolecular decomposition pathways of the CH2ClOCH(O˙)CH3 radical and found that unimolecular C-C bond scission is the kinetically and thermodynamically more feasible pathway compared to other unimolecular decomposition reactions.
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Affiliation(s)
- Subrata Paul
- Department of Chemical Sciences, Tezpur University Tezpur, Assam - 784028, India.
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Baidya B, Lily M, Chandra AK. Kinetics of Reactions of CHF
2
CF
2
CH
2
OH with Cl Atoms and CHF
2
CF
2
CHO with OH Radicals and Atmospheric Degradation Pathways of CHF
2
CF
2
CH
2
OH: A Theoretical Investigation. ChemistrySelect 2019. [DOI: 10.1002/slct.201901571] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Bidisha Baidya
- Department of ChemistryNorth-Eastern Hill University, Shillong India
| | - Makroni Lily
- Department of ChemistryNorth-Eastern Hill University, Shillong India
| | - Asit K. Chandra
- Department of ChemistryNorth-Eastern Hill University, Shillong India
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Keshavarz F, Mazarei E. From Kinetics of OH Reaction with Glutamic Acid to Oxidative Damage to Proteins. J Phys Chem A 2019; 123:429-442. [DOI: 10.1021/acs.jpca.8b08664] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Fatemeh Keshavarz
- Department of Chemistry, College of Science, Shiraz University, Shiraz, Iran
| | - Elham Mazarei
- Department of Chemistry, College of Science, Shiraz University, Shiraz, Iran
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Ma Y, Jia ZM, Bai FY, Pan XM, Zhao L. Theoretical study on the formation mechanisms, dynamics and the effective catalysis of the nitrophenols. ChemistrySelect 2018. [DOI: 10.1002/slct.201802006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Yuan Ma
- Institute of Functional Material Chemistry; National & Local United Engineering Lab for Power Battery; Faculty of Chemistry; Northeast Normal University, 130024, Changchun, People's Republic of; China
| | - Zi-man Jia
- Civil and Environmental Engineering; Henry Samueli School of Engineering and Applied Science; University of California, Los Angeles, California; 90095 United States
| | - Feng-yang Bai
- Institute of Functional Material Chemistry; National & Local United Engineering Lab for Power Battery; Faculty of Chemistry; Northeast Normal University, 130024, Changchun, People's Republic of; China
| | - Xiu-mei Pan
- Institute of Functional Material Chemistry; National & Local United Engineering Lab for Power Battery; Faculty of Chemistry; Northeast Normal University, 130024, Changchun, People's Republic of; China
| | - Liang Zhao
- Institute of Functional Material Chemistry; National & Local United Engineering Lab for Power Battery; Faculty of Chemistry; Northeast Normal University, 130024, Changchun, People's Republic of; China
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11
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Kuzhanthaivelan S, Rajakumar B. Thermochemistry and Kinetic Studies on the Autoignition of 2-Butanone: A Computational Study. J Phys Chem A 2018; 122:6134-6146. [PMID: 29963867 DOI: 10.1021/acs.jpca.8b05167] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Unimolecular reactions of alkylperoxy(ROO•), hydroperoxyalkyl(•QOOH), and hydroperoxyalkylperoxy(•OOQOOH) radicals of 2-butanone, which is a potential biofuel molecule, have been studied computationally. These radicals are responsible for the chain branching at low temperature oxidation and play a significant role in modeling the autoignition. The composite CBS-QB3 method was used to study the thermochemistry and energetics of all the species involved. Intrinsic reaction coordinate (IRC) calculations were carried out for all the transition states along various reaction pathways. All the possible reactions like H-migration, •OH elimination, and HO•2 elimination reactions were studied for these radicals. It was found that, the isomerization of •OOQOOH to HOOQOO• is the most favorable channel, which involves 8- and 9-membered cyclic transition states. However, the decomposition pathway involves the H-migration from carbon to oxygen. The mechanism for the decomposition of all •OOQOOH radicals with their potential energy level diagrams are reported. The temperature dependent rate coefficients were also studied using Canonical Variational Transition state theory (CVT) with small curvature tunneling (SCT) in the temperature range of 400-1500 K, which is relevant to the combustion. Thermodynamic parameters for all the reactions involved were calculated. The high barrier (1,3 H-migration) reactions were found to be exothermic and spontaneous, which is unexpected.
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Affiliation(s)
- S Kuzhanthaivelan
- Department of Chemistry , Indian Institute of Technology , Madras, Chennai - 600036 , India
| | - B Rajakumar
- Department of Chemistry , Indian Institute of Technology , Madras, Chennai - 600036 , India
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12
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Computational study on night-time reaction of 1, 1-Dichlorodimethylether (DCDME) CH3OCHCl2 with NO3 radical and the fortuity of alkoxy radical CH3OC(O )Cl2. Chem Phys Lett 2018. [DOI: 10.1016/j.cplett.2018.04.045] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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13
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Rostamian R, Behnejad H. Insights into doxycycline adsorption onto graphene nanosheet: a combined quantum mechanics, thermodynamics, and kinetic study. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2018; 25:2528-2537. [PMID: 29127637 DOI: 10.1007/s11356-017-0687-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2017] [Accepted: 11/03/2017] [Indexed: 06/07/2023]
Abstract
Recently, pharmaceutically active compounds including antibiotics have been detected in drinking water at very low levels, mostly nanogram/liter concentrations, proposing that these materials were unaffected by water treatment processes. Adsorption processes were suggested to play a significant role in the removal of antibiotics. In this study, the adsorption behavior of doxycycline (DC) in aqueous solution was evaluated. The four factors influencing the adsorption of DC onto graphene nanosheet (GNS) were studied. The results showed that initial pH ∼ 6 to 7 and contact time ∼ 200 min are optimum. The monolayer adsorption capacity was reduced with the increasing temperature from 25 to 45 °C. Nonlinear regressions were carried out to define the best fit model for every system. Among various models, the Hill isotherm model represented the equilibrium adsorption data of antibiotics while the kinetic data were well fitted by the Elovich kinetic model. The maximum adsorption capacity (q max) was 110 mg.g-1, obtained from the Hill equation. Semiempirical molecular orbital theory was used to investigate the molecular interaction of the adsorption system. The experiments and semiempirical computation have systematically demonstrated that DC could be adsorbed onto GNS by π- π and electrostatic interactions. It was shown that there is a good compromise with the experimental results. Graphical abstract Insights into doxycycline adsorption onto graphene nanosheet: quantum mechanics, thermodynamics, and kinetic study.
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Affiliation(s)
- Rahele Rostamian
- Department of Physical Chemistry, School of Chemistry, University College of Science, University of Tehran, Tehran, 14155, Iran.
| | - Hassan Behnejad
- Department of Physical Chemistry, School of Chemistry, University College of Science, University of Tehran, Tehran, 14155, Iran
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Gour NK, Sarma PJ, Mishra BK, Deka RC. Quantum calculation on night-time degradation of 2-chloroethyl ethyl ether (CH3CH2OCH2CH2Cl) initiated by NO3 radical. JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2017. [DOI: 10.1142/s0219633617500687] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
A dual-level quantum chemical calculations have been carried out on the initiation of night-time degradation of 2-chloroethyl ethyl ether (CH3CH2OCH2CH2Cl) via H-abstraction by NO3 radical. Within the scope of density functional theory, the electronic structure of all the species involved in the titled reaction has been optimized at M06-2X functional along with 6-31[Formula: see text]G(d,p) basis set. A higher level of couple cluster CCSD(T) method in conjunction with 6-311[Formula: see text]G(d,p) basis set has been used for the refined energy of the species. All minima and saddle states involved in the reaction channel have been characterized on the potential energy surface (PES). From PES, it is confirmed that H-abstraction from methylene (–CH2–) of ethyl (CH3CH2–) part of CH3CH2OCH2CH2Cl follows the minimum energy path. The rate constants (individual and overall) of the titled reaction are obtained using Canonical Transition State Theory (CTST) over the temperature range of 250–350[Formula: see text]K. The atmospheric lifetime and radiative efficiency of the titled molecule have also been estimated, amounting to 0.23 years and 0.024 years, respectively. The Global Warming Potentials of the 2-chloroethyl ethyl ether in 20 years, 100 years and 500 years time horizon were found to be 0.13, 0.04 and 0.01, respectively.
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Affiliation(s)
- Nand Kishor Gour
- Department of Chemical Sciences, Tezpur, University Tezpur, Napaam, Assam 784 028, India
| | - Plaban Jyoti Sarma
- Department of Chemical Sciences, Tezpur, University Tezpur, Napaam, Assam 784 028, India
| | - Bhupesh Kumar Mishra
- Department of Chemistry, D. N. Govt. College, Itanagar, Arunachal Pradesh 791113, India
| | - Ramesh Chandra Deka
- Department of Chemical Sciences, Tezpur, University Tezpur, Napaam, Assam 784 028, India
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Night-time reaction of 2-chloroethyl methyl ether (CH 3 OCH 2 CH 2 Cl) initiated by NO 3 radical: A theoretical insight. COMPUT THEOR CHEM 2017. [DOI: 10.1016/j.comptc.2017.03.042] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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