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Han X, Yu J, Yang X, Chen C, Zhou H, Qiu C, Cao Y, Zhang T, Peng M, Zhu G, Ni D, Zhang Y, Liu N. Artificial intelligence assistance for fetal development: evaluation of an automated software for biometry measurements in the mid-trimester. BMC Pregnancy Childbirth 2024; 24:158. [PMID: 38395822 PMCID: PMC10885506 DOI: 10.1186/s12884-024-06336-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Accepted: 02/08/2024] [Indexed: 02/25/2024] Open
Abstract
BACKGROUND This study presents CUPID, an advanced automated measurement software based on Artificial Intelligence (AI), designed to evaluate nine fetal biometric parameters in the mid-trimester. Our primary objective was to assess and compare the CUPID performance of experienced senior and junior radiologists. MATERIALS AND METHODS This prospective cross-sectional study was conducted at Shenzhen University General Hospital between September 2022 and June 2023, and focused on mid-trimester fetuses. All ultrasound images of the six standard planes, that enabled the evaluation of nine biometric measurements, were included to compare the performance of CUPID through subjective and objective assessments. RESULTS There were 642 fetuses with a mean (±SD) age of 22â±â2.82âweeks at enrollment. In the subjective quality assessment, out of 642 images representing nine biometric measurements, 617-635 images (90.65-96.11%) of CUPID caliper placements were determined to be accurately placed and did not require any adjustments. Whereas, for the junior category, 447-691 images (69.63-92.06%) were determined to be accurately placed and did not require any adjustments. In the objective measurement indicators, across all nine biometric parameters and estimated fetal weight (EFW), the intra-class correlation coefficients (ICC) (0.843-0.990) and Pearson correlation coefficients (PCC) (0.765-0.978) between the senior radiologist and CUPID reflected good reliability compared with the ICC (0.306-0.937) and PCC (0.566-0.947) between the senior and junior radiologists. Additionally, the mean absolute error (MAE), percentage error (PE), and average error in days of gestation were lower between the senior and CUPID compared to the difference between the senior and junior radiologists. The specific differences are as follows: MAE (0.36-2.53âmm, 14.67âg) compared to (0.64- 8.13âmm, 38.05âg), PE (0.94-9.38%) compared to (1.58-16.04%), and average error in days (3.99-7.92âdays) compared to (4.35-11.06âdays). In the time-consuming task, CUPID only takes 0.05-0.07âs to measure nine biometric parameters, while senior and junior radiologists require 4.79-11.68âs and 4.95-13.44âs, respectively. CONCLUSIONS CUPID has proven to be highly accurate and efficient software for automatically measuring fetal biometry, gestational age, and fetal weight, providing a precise and fast tool for assessing fetal growth and development.
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Affiliation(s)
- Xuesong Han
- Department of Ultrasonography, Shenzhen University General Hospital, Shenzhen, Guangdong, China
| | - Junxuan Yu
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong, China
- Medical Ultrasound Image Computing (MUSIC) Lab, Shenzhen University, Shenzhen, Guangdong, China
- Marshall Laboratory of Biomedical Engineering, Shenzhen University, Shenzhen, Guangdong, China
| | - Xin Yang
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong, China
- Medical Ultrasound Image Computing (MUSIC) Lab, Shenzhen University, Shenzhen, Guangdong, China
- Marshall Laboratory of Biomedical Engineering, Shenzhen University, Shenzhen, Guangdong, China
| | - Chaoyu Chen
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong, China
- Medical Ultrasound Image Computing (MUSIC) Lab, Shenzhen University, Shenzhen, Guangdong, China
- Marshall Laboratory of Biomedical Engineering, Shenzhen University, Shenzhen, Guangdong, China
| | - Han Zhou
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong, China
- Medical Ultrasound Image Computing (MUSIC) Lab, Shenzhen University, Shenzhen, Guangdong, China
- Marshall Laboratory of Biomedical Engineering, Shenzhen University, Shenzhen, Guangdong, China
| | - Chuangxin Qiu
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong, China
- Medical Ultrasound Image Computing (MUSIC) Lab, Shenzhen University, Shenzhen, Guangdong, China
- Marshall Laboratory of Biomedical Engineering, Shenzhen University, Shenzhen, Guangdong, China
| | - Yan Cao
- Shenzhen RayShape Medical Technology Co., Ltd, Shenzhen, Guangdong, China
| | | | | | - Guiyao Zhu
- Department of Ultrasonography, Shenzhen University General Hospital, Shenzhen, Guangdong, China
| | - Dong Ni
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong, China
- Medical Ultrasound Image Computing (MUSIC) Lab, Shenzhen University, Shenzhen, Guangdong, China
- Marshall Laboratory of Biomedical Engineering, Shenzhen University, Shenzhen, Guangdong, China
| | - Yuanji Zhang
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong, China.
- Medical Ultrasound Image Computing (MUSIC) Lab, Shenzhen University, Shenzhen, Guangdong, China.
- Marshall Laboratory of Biomedical Engineering, Shenzhen University, Shenzhen, Guangdong, China.
| | - Nana Liu
- Department of Ultrasonography, Shenzhen University General Hospital, Shenzhen, Guangdong, China.
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Xiao S, Zhang J, Zhu Y, Zhang Z, Cao H, Xie M, Zhang L. Application and Progress of Artificial Intelligence in Fetal Ultrasound. J Clin Med 2023; 12:jcm12093298. [PMID: 37176738 PMCID: PMC10179567 DOI: 10.3390/jcm12093298] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2023] [Revised: 04/01/2023] [Accepted: 04/28/2023] [Indexed: 05/15/2023] Open
Abstract
Prenatal ultrasonography is the most crucial imaging modality during pregnancy. However, problems such as high fetal mobility, excessive maternal abdominal wall thickness, and inter-observer variability limit the development of traditional ultrasound in clinical applications. The combination of artificial intelligence (AI) and obstetric ultrasound may help optimize fetal ultrasound examination by shortening the examination time, reducing the physician's workload, and improving diagnostic accuracy. AI has been successfully applied to automatic fetal ultrasound standard plane detection, biometric parameter measurement, and disease diagnosis to facilitate conventional imaging approaches. In this review, we attempt to thoroughly review the applications and advantages of AI in prenatal fetal ultrasound and discuss the challenges and promises of this new field.
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Affiliation(s)
- Sushan Xiao
- Department of Ultrasound Medicine, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430022, China
- Clinical Research Center for Medical Imaging in Hubei Province, Wuhan 430022, China
- Hubei Province Key Laboratory of Molecular Imaging, Wuhan 430022, China
| | - Junmin Zhang
- Department of Ultrasound Medicine, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430022, China
- Clinical Research Center for Medical Imaging in Hubei Province, Wuhan 430022, China
- Hubei Province Key Laboratory of Molecular Imaging, Wuhan 430022, China
| | - Ye Zhu
- Department of Ultrasound Medicine, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430022, China
- Clinical Research Center for Medical Imaging in Hubei Province, Wuhan 430022, China
- Hubei Province Key Laboratory of Molecular Imaging, Wuhan 430022, China
| | - Zisang Zhang
- Department of Ultrasound Medicine, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430022, China
- Clinical Research Center for Medical Imaging in Hubei Province, Wuhan 430022, China
- Hubei Province Key Laboratory of Molecular Imaging, Wuhan 430022, China
| | - Haiyan Cao
- Department of Ultrasound Medicine, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430022, China
- Clinical Research Center for Medical Imaging in Hubei Province, Wuhan 430022, China
- Hubei Province Key Laboratory of Molecular Imaging, Wuhan 430022, China
| | - Mingxing Xie
- Department of Ultrasound Medicine, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430022, China
- Clinical Research Center for Medical Imaging in Hubei Province, Wuhan 430022, China
- Hubei Province Key Laboratory of Molecular Imaging, Wuhan 430022, China
| | - Li Zhang
- Department of Ultrasound Medicine, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430022, China
- Clinical Research Center for Medical Imaging in Hubei Province, Wuhan 430022, China
- Hubei Province Key Laboratory of Molecular Imaging, Wuhan 430022, China
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Sahli H, Ben Slama A, Mouelhi A, Soayeh N, Rachdi R, Sayadi M. A computer-aided method based on geometrical texture features for a precocious detection of fetal Hydrocephalus in ultrasound images. Technol Health Care 2021; 28:643-664. [PMID: 32200362 DOI: 10.3233/thc-191752] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
BACKGROUD Hydrocephalus is the most common anomaly of the fetal head characterized by an excessive accumulation of fluid in the brain processing. The diagnostic process of fetal heads using traditional evaluation techniques are generally time consuming and error prone. Usually, fetal head size is computed using an ultrasound (US) image around 20-22 weeks, which is the gestational age (GA). Biometrical measurements are extracted and compared with ground truth charts to identify normal or abnormal growth. METHODS In this paper, an attempt has been made to enhance the Hydrocephalus characterization process by extracting other geometrical and textural features to design an efficient recognition system. The superiority of this work consists of the reduced time processing and the complexity of standard automatic approaches for routine examination. This proposed method requires practical insidiousness of the precocious discovery of fetuses' malformation to alert the experts about the existence of abnormal outcome. The first task is devoted to a proposed pre-processing model using a standard filtering and a segmentation scheme using a modified Hough transform (MHT) to detect the region of interest. Indeed, the obtained clinical parameters are presented to the principal component analysis (PCA) model in order to obtain a reduced number of measures which are employed in the classification stage. RESULTS Thanks to the combination of geometrical and statistical features, the classification process provided an important ability and an interesting performance achieving more than 96% of accuracy to detect pathological subjects in premature ages. CONCLUSIONS The experimental results illustrate the success and the accuracy of the proposed classification method for a factual diagnostic of fetal head malformation.
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Affiliation(s)
- Hanene Sahli
- University of Tunis, ENSIT, LR13ES03 SIME, Tunis, Tunisia
| | - Amine Ben Slama
- University of Tunis El Manar, ISTMT, LR13ES07, LRBTM, Tunis, Tunisia
| | - Aymen Mouelhi
- University of Tunis, ENSIT, LR13ES03 SIME, Tunis, Tunisia
| | - Nesrine Soayeh
- Obstetrics, Gynecology and Reproductive Department, Military Hospital, Tunis, Tunisia
| | - Radhouane Rachdi
- Obstetrics, Gynecology and Reproductive Department, Military Hospital, Tunis, Tunisia
| | - Mounir Sayadi
- University of Tunis, ENSIT, LR13ES03 SIME, Tunis, Tunisia
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Yang X, Li H, Liu L, Ni D. Scale-aware Auto-context-guided Fetal US Segmentation with Structured Random Forests. BIO INTEGRATION 2020. [DOI: 10.15212/bioi-2020-0016] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Abstract Accurate measurement of fetal biometrics in ultrasound at different trimesters is essential in assisting clinicians to conduct pregnancy diagnosis. However, the accuracy of manual segmentation for measurement is highly user-dependent. Here, we design a general framework
for automatically segmenting fetal anatomical structures in two-dimensional (2D) ultrasound (US) images and thus make objective biometric measurements available. We first introduce structured random forests (SRFs) as the core discriminative predictor to recognize the region of fetal anatomical
structures with a primary classification map. The patch-wise joint labeling presented by SRFs has inherent advantages in identifying an ambiguous/fuzzy boundary and reconstructing incomplete anatomical boundary in US. Then, to get a more accurate and smooth classification map, a scale-aware
auto-context model is injected to enhance the contour details of the classification map from various visual levels. Final segmentation can be obtained from the converged classification map with thresholding. Our framework is validated on two important biometric measurements, which are fetal
head circumference (HC) and abdominal circumference (AC). The final results illustrate that our proposed method outperforms state-of-the-art methods in terms of segmentation accuracy.
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Affiliation(s)
- Xin Yang
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen 518060,
China
| | - Haoming Li
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen
518060, China
| | - Li Liu
- Department of Electronic Engineering, the Chinese University of Hong Kong, Hong Kong, China
| | - Dong Ni
- National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, School of Biomedical Engineering, Health Science Center, Shenzhen University, Shenzhen 518060,
China
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6
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Kim HP, Lee SM, Kwon JY, Park Y, Kim KC, Seo JK. Automatic evaluation of fetal head biometry from ultrasound images using machine learning. Physiol Meas 2019; 40:065009. [PMID: 31091515 DOI: 10.1088/1361-6579/ab21ac] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
OBJECTIVE Ultrasound-based fetal biometric measurements, such as head circumference (HC) and biparietal diameter (BPD), are frequently used to evaluate gestational age and diagnose fetal central nervous system pathology. Because manual measurements are operator-dependent and time-consuming, much research is being actively conducted on automated methods. However, the existing automated methods are still not satisfactory in terms of accuracy and reliability, owing to difficulties dealing with various artefacts in ultrasound images. APPROACH Using the proposed method, a labeled dataset containing 102 ultrasound images was used for training, and validation was performed with 70 ultrasound images. MAIN RESULTS A success rate of 91.43% and 100% for HC and BPD estimations, respectively, and an accuracy of 87.14% for the plane acceptance check. SIGNIFICANCE This paper focuses on fetal head biometry and proposes a deep-learning-based method for estimating HC and BPD with a high degree of accuracy and reliability.
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7
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Kim B, Kim KC, Park Y, Kwon JY, Jang J, Seo JK. Machine-learning-based automatic identification of fetal abdominal circumference from ultrasound images. Physiol Meas 2018; 39:105007. [PMID: 30226815 DOI: 10.1088/1361-6579/aae255] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
OBJECTIVE Obstetricians mainly use ultrasound imaging for fetal biometric measurements. However, such measurements are cumbersome. Hence, there is urgent need for automatic biometric estimation. Automated analysis of ultrasound images is complicated owing to the patient-specific, operator-dependent, and machine-specific characteristics of such images. APPROACH This paper proposes a method for the automatic fetal biometry estimation from 2D ultrasound data through several processes consisting of a specially designed convolutional neural network (CNN) and U-Net for each process. These machine learning techniques take clinicians' decisions, anatomical structures, and the characteristics of ultrasound images into account. The proposed method is divided into three steps: initial abdominal circumference (AC) estimation, AC measurement, and plane acceptance checking. MAIN RESULTS A CNN is used to classify ultrasound images (stomach bubble, amniotic fluid, and umbilical vein), and a Hough transform is used to obtain an initial estimate of the AC. These data are applied to other CNNs to estimate the spine position and bone regions. Then, the obtained information is used to determine the final AC. After determining the AC, a U-Net and a classification CNN are used to check whether the image is suitable for AC measurement. Finally, the efficacy of the proposed method is validated by clinical data. SIGNIFICANCE Our method achieved a Dice similarity metric of [Formula: see text] for AC measurement and an accuracy of 87.10% for our acceptance check of the fetal abdominal standard plane.
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Affiliation(s)
- Bukweon Kim
- Department of Computational Science and Engineering, Yonsei University, Seoul 03722, Republic of Korea
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8
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Automated Techniques for the Interpretation of Fetal Abnormalities: A Review. Appl Bionics Biomech 2018; 2018:6452050. [PMID: 29983738 PMCID: PMC6015700 DOI: 10.1155/2018/6452050] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2017] [Revised: 04/07/2018] [Accepted: 05/10/2018] [Indexed: 11/17/2022] Open
Abstract
Ultrasound (US) image segmentation methods, focusing on techniques developed for fetal biometric parameters and nuchal translucency, are briefly reviewed. Ultrasound medical images can easily identify the fetus using segmentation techniques and calculate fetal parameters. It can timely find the fetal abnormality so that necessary action can be taken by the pregnant woman. Firstly, a detailed literature has been offered on fetal biometric parameters and nuchal translucency to highlight the investigation approaches with a degree of validation in diverse clinical domains. Then, a categorization of the bibliographic assessment of recent research effort in the segmentation field of ultrasound 2D fetal images has been presented. The fetal images of high-risk pregnant women have been taken into the routine and continuous monitoring of fetal parameters. These parameters are used for detection of fetal weight, fetal growth, gestational age, and any possible abnormality detection.
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9
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Jang J, Park Y, Kim B, Lee SM, Kwon JY, Seo JK. Automatic Estimation of Fetal Abdominal Circumference From Ultrasound Images. IEEE J Biomed Health Inform 2017; 22:1512-1520. [PMID: 29990257 DOI: 10.1109/jbhi.2017.2776116] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Ultrasound diagnosis is routinely used in obstetrics and gynecology for fetal biometry, and owing to its time-consuming process, there has been a great demand for automatic estimation. However, the automated analysis of ultrasound images is complicated because they are patient specific, operator dependent, and machine specific. Among various types of fetal biometry, the accurate estimation of abdominal circumference (AC) is especially difficult to perform automatically because the abdomen has low contrast against surroundings, nonuniform contrast, and irregular shape compared to other parameters. We propose a method for the automatic estimation of the fetal AC from two-dimensional ultrasound data through a specially designed convolutional neural network (CNN), which takes account of doctors' decision process, anatomical structure, and the characteristics of the ultrasound image. The proposed method uses CNN to classify ultrasound images (stomach bubble, amniotic fluid, and umbilical vein) and Hough transformation for measuring AC. We test the proposed method using clinical ultrasound data acquired from 56 pregnant women. Experimental results show that, with relatively small training samples, the proposed CNN provides sufficient classification results for AC estimation through the Hough transformation. The proposed method automatically estimates AC from ultrasound images. The method is quantitatively evaluated and shows stable performance in most cases and even for ultrasound images deteriorated by shadowing artifacts. As a result of experiments for our acceptance check, the accuracies are 0.809 and 0.771 with expert 1 and expert 2, respectively, whereas the accuracy between the two experts is 0.905. However, for cases of oversized fetus, when the amniotic fluid is not observed or the abdominal area is distorted, it could not correctly estimate AC.
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10
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The Effect of the Amniotic Fluid Index on the Accuracy of Ultrasonographic-Estimated Fetal Weight. Ultrasound Q 2017; 33:148-152. [DOI: 10.1097/ruq.0000000000000275] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Zhang L, Dudley NJ, Lambrou T, Allinson N, Ye X. Automatic image quality assessment and measurement of fetal head in two-dimensional ultrasound image. J Med Imaging (Bellingham) 2017; 4:024001. [PMID: 28439522 DOI: 10.1117/1.jmi.4.2.024001] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2016] [Accepted: 03/31/2017] [Indexed: 11/14/2022] Open
Abstract
Owing to the inconsistent image quality existing in routine obstetric ultrasound (US) scans that leads to a large intraobserver and interobserver variability, the aim of this study is to develop a quality-assured, fully automated US fetal head measurement system. A texton-based fetal head segmentation is used as a prerequisite step to obtain the head region. Textons are calculated using a filter bank designed specific for US fetal head structure. Both shape- and anatomic-based features calculated from the segmented head region are then fed into a random forest classifier to determine the quality of the image (e.g., whether the image is acquired from a correct imaging plane), from which fetal head measurements [biparietal diameter (BPD), occipital-frontal diameter (OFD), and head circumference (HC)] are derived. The experimental results show a good performance of our method for US quality assessment and fetal head measurements. The overall precision for automatic image quality assessment is 95.24% with 87.5% sensitivity and 100% specificity, while segmentation performance shows 99.27% ([Formula: see text]) of accuracy, 97.07% ([Formula: see text]) of sensitivity, 2.23Â mm ([Formula: see text]) of the maximum symmetric contour distance, and 0.84Â mm ([Formula: see text]) of the average symmetric contour distance. The statistical analysis results using paired [Formula: see text]-test and Bland-Altman plots analysis indicate that the 95% limits of agreement for inter observer variability between the automated measurements and the senior expert measurements are 2.7Â mm of BPD, 5.8Â mm of OFD, and 10.4Â mm of HC, whereas the mean differences are [Formula: see text], [Formula: see text], and [Formula: see text], respectively. These narrow 95% limits of agreements indicate a good level of consistency between the automated and the senior expert's measurements.
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Affiliation(s)
- Lei Zhang
- University of Lincoln, School of Computer Science, Laboratory of Vision Engineering, Brayford Pool, Lincoln, United Kingdom
| | - Nicholas J Dudley
- United Lincolnshire Hospitals NHS Trust, Medical Physics, Lincoln County Hospital, Lincoln, United Kingdom
| | - Tryphon Lambrou
- University of Lincoln, School of Computer Science, Laboratory of Vision Engineering, Brayford Pool, Lincoln, United Kingdom
| | - Nigel Allinson
- University of Lincoln, School of Computer Science, Laboratory of Vision Engineering, Brayford Pool, Lincoln, United Kingdom
| | - Xujiong Ye
- University of Lincoln, School of Computer Science, Laboratory of Vision Engineering, Brayford Pool, Lincoln, United Kingdom
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Zhang L, Ye X, Lambrou T, Duan W, Allinson N, Dudley NJ. A supervised texton based approach for automatic segmentation and measurement of the fetal head and femur in 2D ultrasound images. Phys Med Biol 2016; 61:1095-115. [DOI: 10.1088/0031-9155/61/3/1095] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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13
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Rueda S, Knight CL, Papageorghiou AT, Noble JA. Feature-based fuzzy connectedness segmentation of ultrasound images with an object completion step. Med Image Anal 2015; 26:30-46. [PMID: 26319973 PMCID: PMC4686006 DOI: 10.1016/j.media.2015.07.002] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2013] [Revised: 05/28/2015] [Accepted: 07/11/2015] [Indexed: 11/24/2022]
Abstract
Medical ultrasound (US) image segmentation and quantification can be challenging due to signal dropouts, missing boundaries, and presence of speckle, which gives images of similar objects quite different appearance. Typically, purely intensity-based methods do not lead to a good segmentation of the structures of interest. Prior work has shown that local phase and feature asymmetry, derived from the monogenic signal, extract structural information from US images. This paper proposes a new US segmentation approach based on the fuzzy connectedness framework. The approach uses local phase and feature asymmetry to define a novel affinity function, which drives the segmentation algorithm, incorporates a shape-based object completion step, and regularises the result by mean curvature flow. To appreciate the accuracy and robustness of the methodology across clinical data of varying appearance and quality, a novel entropy-based quantitative image quality assessment of the different regions of interest is introduced. The new method is applied to 81 US images of the fetal arm acquired at multiple gestational ages, as a means to define a new automated image-based biomarker of fetal nutrition. Quantitative and qualitative evaluation shows that the segmentation method is comparable to manual delineations and robust across image qualities that are typical of clinical practice.
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Affiliation(s)
- Sylvia Rueda
- Centre of Excellence in Personalised Healthcare, Institute of Biomedical Engineering, Department of Engineering Science, University of Oxford, Old Road Campus Research Building, Headington, OX3 7DQ Oxford, UK.
| | - Caroline L Knight
- Centre of Excellence in Personalised Healthcare, Institute of Biomedical Engineering, Department of Engineering Science, University of Oxford, Old Road Campus Research Building, Headington, OX3 7DQ Oxford, UK; Nuffield Department of Obstetrics & Gynaecology, University of Oxford, Oxford, U.K
| | - Aris T Papageorghiou
- Nuffield Department of Obstetrics & Gynaecology, University of Oxford, Oxford, U.K; Oxford Maternal & Perinatal Health Institute, Green Templeton College, University of Oxford, Oxford, UK
| | - J Alison Noble
- Centre of Excellence in Personalised Healthcare, Institute of Biomedical Engineering, Department of Engineering Science, University of Oxford, Old Road Campus Research Building, Headington, OX3 7DQ Oxford, UK
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Dahdouh S, Angelini ED, Grangé G, Bloch I. Segmentation of embryonic and fetal 3D ultrasound images based on pixel intensity distributions and shape priors. Med Image Anal 2015; 24:255-268. [DOI: 10.1016/j.media.2014.12.005] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2014] [Revised: 12/16/2014] [Accepted: 12/18/2014] [Indexed: 12/26/2022]
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15
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Foi A, Maggioni M, Pepe A, Rueda S, Noble JA, Papageorghiou AT, Tohka J. Difference of Gaussians revolved along elliptical paths for ultrasound fetal head segmentation. Comput Med Imaging Graph 2014; 38:774-84. [DOI: 10.1016/j.compmedimag.2014.09.006] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2014] [Revised: 07/31/2014] [Accepted: 09/18/2014] [Indexed: 10/24/2022]
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16
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Rueda S, Fathima S, Knight CL, Yaqub M, Papageorghiou AT, Rahmatullah B, Foi A, Maggioni M, Pepe A, Tohka J, Stebbing RV, McManigle JE, Ciurte A, Bresson X, Cuadra MB, Sun C, Ponomarev GV, Gelfand MS, Kazanov MD, Wang CW, Chen HC, Peng CW, Hung CM, Noble JA. Evaluation and comparison of current fetal ultrasound image segmentation methods for biometric measurements: a grand challenge. IEEE TRANSACTIONS ON MEDICAL IMAGING 2014; 33:797-813. [PMID: 23934664 DOI: 10.1109/tmi.2013.2276943] [Citation(s) in RCA: 71] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
This paper presents the evaluation results of the methods submitted to Challenge US: Biometric Measurements from Fetal Ultrasound Images, a segmentation challenge held at the IEEE International Symposium on Biomedical Imaging 2012. The challenge was set to compare and evaluate current fetal ultrasound image segmentation methods. It consisted of automatically segmenting fetal anatomical structures to measure standard obstetric biometric parameters, from 2D fetal ultrasound images taken on fetuses at different gestational ages (21 weeks, 28 weeks, and 33 weeks) and with varying image quality to reflect data encountered in real clinical environments. Four independent sub-challenges were proposed, according to the objects of interest measured in clinical practice: abdomen, head, femur, and whole fetus. Five teams participated in the head sub-challenge and two teams in the femur sub-challenge, including one team who tackled both. Nobody attempted the abdomen and whole fetus sub-challenges. The challenge goals were two-fold and the participants were asked to submit the segmentation results as well as the measurements derived from the segmented objects. Extensive quantitative (region-based, distance-based, and Bland-Altman measurements) and qualitative evaluation was performed to compare the results from a representative selection of current methods submitted to the challenge. Several experts (three for the head sub-challenge and two for the femur sub-challenge), with different degrees of expertise, manually delineated the objects of interest to define the ground truth used within the evaluation framework. For the head sub-challenge, several groups produced results that could be potentially used in clinical settings, with comparable performance to manual delineations. The femur sub-challenge had inferior performance to the head sub-challenge due to the fact that it is a harder segmentation problem and that the techniques presented relied more on the femur's appearance.
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Chen HC, Wang YY, Lin CH, Wang CK, Jou IM, Su FC, Sun YN. A knowledge-based approach for carpal tunnel segmentation from magnetic resonance images. J Digit Imaging 2012; 26:510-20. [PMID: 23053905 DOI: 10.1007/s10278-012-9530-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
Abstract
Carpal tunnel syndrome (CTS) has been reported as one of the most common peripheral neuropathies. Carpal tunnel segmentation from magnetic resonance (MR) images is important for the evaluation of CTS. To date, manual segmentation, which is time-consuming and operator dependent, remains the most common approach for the analysis of the carpal tunnel structure. Therefore, we propose a new knowledge-based method for automatic segmentation of the carpal tunnel from MR images. The proposed method first requires the segmentation of the carpal tunnel from the most proximally cross-sectional image. Three anatomical features of the carpal tunnel are detected by watershed and polygonal curve fitting algorithms to automatically initialize a deformable model as close to the carpal tunnel in the given image as possible. The model subsequently deforms toward the tunnel boundary based on image intensity information, shape bending degree, and the geometry constraints of the carpal tunnel. After the deformation process, the carpal tunnel in the most proximal image is segmented and subsequently applied to a contour propagation step to extract the tunnel contours sequentially from the remaining cross-sectional images. MR volumes from 15 subjects were included in the validation experiments. Compared with the ground truth of two experts, our method showed good agreement on tunnel segmentations by an average margin of error within 1Â mm and dice similarity coefficient above 0.9.
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Affiliation(s)
- Hsin-Chen Chen
- Department of Computer Science and Information Engineering, National Cheng Kung University, No. 1, University Road, Tainan, 701, Taiwan, Republic of China.
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Chen HC, Tsai PY, Huang HH, Shih HH, Wang YY, Chang CH, Sun YN. Registration-based segmentation of three-dimensional ultrasound images for quantitative measurement of fetal craniofacial structure. ULTRASOUND IN MEDICINE & BIOLOGY 2012; 38:811-823. [PMID: 22425377 DOI: 10.1016/j.ultrasmedbio.2012.01.025] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2011] [Revised: 01/05/2012] [Accepted: 01/26/2012] [Indexed: 05/31/2023]
Abstract
Segmentation of a fetal head from three-dimensional (3-D) ultrasound images is a critical step in the quantitative measurement of fetal craniofacial structure. However, two main issues complicate segmentation, including fuzzy boundaries and large variations in pose and shape among different ultrasound images. In this article, we propose a new registration-based method for automatically segmenting the fetal head from 3-D ultrasound images. The proposed method first detects the eyes based on Gabor features to identify the pose of the fetus image. Then, a reference model, which is constructed from a fetal phantom and contains prior knowledge of head shape, is aligned to the image via feature-based registration. Finally, 3-D snake deformation is utilized to improve the boundary fitness between the model and image. Four clinically useful parameters including inter-orbital diameter (IOD), bilateral orbital diameter (BOD), occipital frontal diameter (OFD) and bilateral parietal diameter (BPD) are measured based on the results of the eye detection and head segmentation. Ultrasound volumes from 11 subjects were used for validation of the method accuracy. Experimental results showed that the proposed method was able to overcome the aforementioned difficulties and achieve good agreement between automatic and manual measurements.
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Affiliation(s)
- Hsin-Chen Chen
- Department of Computer Science and Information Engineering, National Cheng Kung University, Tainan, Taiwan ROC
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Chen HC, Chen CK, Yang TH, Kuo LC, Jou IM, Su FC, Sun YN. Model-based segmentation of flexor tendons from magnetic resonance images of finger joints. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2011; 2011:8009-8012. [PMID: 22256199 DOI: 10.1109/iembs.2011.6091975] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Trigger finger is a common hand disease, causing swelling, painful popping and clicking in moving the affected finger joint. To better evaluate patients with trigger finger, segmentation of flexor tendons from magnetic resonance (MR) images of finger joints, which can offer detailed structural information of tendons to clinicians, is essential. This paper presents a novel model-based method with three stages for automatically segmenting the flexor tendons. In the first stage, a set of tendon contour models (TCMs) is initialized from the most proximal cross-sectional image via two-step ellipse estimation. Each of the TCMs is then propagated to its distally adjacent image by affine registration. The propagation is sequentially performed along the proximal-distal direction until the most distal image is reached, as the second stage of segmentation. The TCMs on each cross-sectional image are refined in the last stage with the snake deformation. MR volumes of three subjects were used to validate the segmentation accuracy. Compared with the manual results, our method showed good accuracy with small average margins of errors (within 0.5 mm) and large overlapping ratio (dice similarity coefficient above 0.8). Overall, the proposed method has great potential for morphological change assessment of flexor tendons and pulley-tendon system modeling for image guided surgery.
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Affiliation(s)
- H C Chen
- Department of Computer Science and Information Engineering, National Cheng Kung University, Tainan, Taiwan, ROC
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