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Szczęsna A, Augustyn D, Harężlak K, Josiński H, Świtoński A, Kasprowski P. Datasets for learning of unknown characteristics of dynamical systems. Sci Data 2023; 10:79. [PMID: 36750577 PMCID: PMC9905521 DOI: 10.1038/s41597-023-01978-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2022] [Accepted: 01/19/2023] [Indexed: 02/09/2023] Open
Abstract
The ability to uncover characteristics based on empirical measurement is an important step in understanding the underlying system that gives rise to an observed time series. This is especially important for biological signals whose characteristic contributes to the underlying dynamics of the physiological processes. Therefore, by studying such signals, the physiological systems that generate them can be better understood. The datasets presented consist of 33,000 time series of 15 dynamical systems (five chaotic and ten non-chaotic) of the first, second, or third order. Here, the order of a dynamical system means its dimension. The non-chaotic systems were divided into the following classes: periodic, quasi-periodic, and non-periodic. The aim is to propose datasets for machine learning methods, in particular deep learning techniques, to analyze unknown dynamical system characteristics based on obtained time series. In technical validation, three classifications experiments were conducted using two types of neural networks with long short-term memory modules and convolutional layers.
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Affiliation(s)
- Agnieszka Szczęsna
- Department of Computer Graphics, Vision and Digital Systems, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, 44-100, Gliwice, Akademicka 16, Poland.
| | - Dariusz Augustyn
- Department of Applied Informatics, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, 44-100, Gliwice, Akademicka 16, Poland
| | - Katarzyna Harężlak
- Department of Applied Informatics, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, 44-100, Gliwice, Akademicka 16, Poland
| | - Henryk Josiński
- Department of Computer Graphics, Vision and Digital Systems, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, 44-100, Gliwice, Akademicka 16, Poland
| | - Adam Świtoński
- Department of Computer Graphics, Vision and Digital Systems, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, 44-100, Gliwice, Akademicka 16, Poland
| | - Paweł Kasprowski
- Department of Applied Informatics, Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, 44-100, Gliwice, Akademicka 16, Poland
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Chaotic Signatures Exhibited by Plasmonic Effects in Au Nanoparticles with Cells. SENSORS 2019; 19:s19214728. [PMID: 31683534 PMCID: PMC6864870 DOI: 10.3390/s19214728] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/11/2019] [Revised: 10/21/2019] [Accepted: 10/21/2019] [Indexed: 12/21/2022]
Abstract
The evolution of the optical absorptive effects exhibited by plasmonic nanoparticles was systematically analyzed by electronic signals modulated by a Rössler attractor system. A sol-gel approach was employed for the preparation of the studied Au nanoparticles embedded in a TiO2 thin solid film. The inclusion of the nanoparticles in an inhomogeneous biological sample integrated by human cells deposited in an ITO glass substrate was evaluated with a high level of sensitivity using an opto-electronic chaotic circuit. The optical response of the nanoparticles was determined using nanosecond laser pulses in order to guarantee the sensing performance of the system. It was shown that high-intensity irradiances at a wavelength of 532 nm could promote a change in the absorption band of the localized surface plasmon resonance associated with an increase in the nanoparticle density of the film. Moreover, it was revealed that interferometrically-controlled energy transfer mechanisms can be useful for thermo-plasmonic functions and sharp selective optical damage induced by the vectorial nature of light. Immediate applications of two-wave mixing techniques, together with chaotic effects, can be contemplated in the development of nanostructured sensors and laser-induced controlled explosions, with potential applications for biomedical photo-thermal processes.
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Harezlak K, Kasprowski P. Understanding Eye Movement Signal Characteristics Based on Their Dynamical and Fractal Features. SENSORS (BASEL, SWITZERLAND) 2019; 19:E626. [PMID: 30717223 PMCID: PMC6387149 DOI: 10.3390/s19030626] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/18/2018] [Revised: 01/26/2019] [Accepted: 01/28/2019] [Indexed: 11/18/2022]
Abstract
Eye movement is one of the biological signals whose exploration may reveal substantial information, enabling greater understanding of the biology of the brain and its mechanisms. In this research, eye movement dynamics were studied in terms of chaotic behavior and self-similarity assessment to provide a description of young, healthy, oculomotor system characteristics. The first of the investigated features is present and advantageous for many biological objects or physiological phenomena, and its vanishing or diminishment may indicate a system pathology. Similarly, exposed self-similarity may prove useful for indicating a young and healthy system characterized by adaptability. For this research, 24 young people with normal vision were involved. Their eye movements were registered with the usage of a head-mounted eye tracker, using infrared oculography, embedded in the sensor, measuring the rotations of the left and the right eye. The influence of the preprocessing step in the form of the application of various filtering methods on the assessment of the final dynamics was also explored. The obtained results confirmed the existence of chaotic behavior in some parts of eye movement signal; however, its strength turned out to be dependent on the filter used. They also exposed the long-range correlation representing self-similarity, although the influence of the applied filters on these outcomes was not unveiled.
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Affiliation(s)
- Katarzyna Harezlak
- Institute of Informatics, Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland.
| | - Pawel Kasprowski
- Institute of Informatics, Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland.
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Hynes NJ, Cufflin MP, Hampson KM, Mallen EAH. Cognitive Demand and Accommodative Microfluctuations. Vision (Basel) 2018; 2:vision2030036. [PMID: 31735899 PMCID: PMC6836075 DOI: 10.3390/vision2030036] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2018] [Revised: 08/31/2018] [Accepted: 09/04/2018] [Indexed: 12/29/2022] Open
Abstract
Previous studies have shown cognition to have an influence on accommodation. Temporal variation in the accommodative response occurs during the fixation on a stationary target. This constantly shifting response has been called accommodative micro-fluctuations (AMFs). The aim of this study is to determine the effects of increasing task cognitive demand on the ocular accommodation response. AMFs for 12 myopes and 12 emmetropes were measured under three conditions of varying cognitive demand and comprising reading of numbers (Num), simple arithmetic (SA), and complex arithmetic (CA). Fast Fourier transforms were used to analyze the different frequency band components of the AMFs. Other aspects of AMFs including root mean square accommodation values and chaos analysis was applied. A repeated measures ANOVA revealed a significant main effect of cognition in the mean power of the high frequency component (HFC) (F2,44 = 10.03, p < 0.005). Pairwise analyses revealed that these differences exist between SA and CA tasks (p < 0.005) and the Num and CA (p < 0.005) tasks with the HFC power being the highest for the CA condition. It appears that the difficulty of a task does affect active accommodation but to a lesser extent than other factors affecting accommodation.
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Affiliation(s)
- Niall J. Hynes
- School of Optometry & Vision Science, University of Bradford, Bradford BD7 1DP, UK
- Correspondence:
| | - Matthew P. Cufflin
- School of Optometry & Vision Science, University of Bradford, Bradford BD7 1DP, UK
| | - Karen M. Hampson
- Department of Engineering Science, University of Oxford, Oxford OX1 3PJ, UK
| | - Edward A. H. Mallen
- School of Optometry & Vision Science, University of Bradford, Bradford BD7 1DP, UK
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Searching for Chaos Evidence in Eye Movement Signals. ENTROPY 2018; 20:e20010032. [PMID: 33265121 PMCID: PMC7512232 DOI: 10.3390/e20010032] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/04/2017] [Revised: 12/27/2017] [Accepted: 12/29/2017] [Indexed: 11/20/2022]
Abstract
Most naturally-occurring physical phenomena are examples of nonlinear dynamic systems, the functioning of which attracts many researchers seeking to unveil their nature. The research presented in this paper is aimed at exploring eye movement dynamic features in terms of the existence of chaotic nature. Nonlinear time series analysis methods were used for this purpose. Two time series features were studied: fractal dimension and entropy, by utilising the embedding theory. The methods were applied to the data collected during the experiment with “jumping point” stimulus. Eye movements were registered by means of the Jazz-novo eye tracker. One thousand three hundred and ninety two (1392) time series were defined, based on the horizontal velocity of eye movements registered during imposed, prolonged fixations. In order to conduct detailed analysis of the signal and identify differences contributing to the observed patterns of behaviour in time scale, fractal dimension and entropy were evaluated in various time series intervals. The influence of the noise contained in the data and the impact of the utilized filter on the obtained results were also studied. The low pass filter was used for the purpose of noise reduction with a 50 Hz cut-off frequency, estimated by means of the Fourier transform and all concerned methods were applied to time series before and after noise reduction. These studies provided some premises, which allow perceiving eye movements as observed chaotic data: characteristic of a space-time separation plot, low and non-integer time series dimension, and the time series entropy characteristic for chaotic systems.
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