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Tapinova O, Finkelman T, Reitich-Stolero T, Paz R, Tal A, Gov NS. Integrated Ising Model with global inhibition for decision making. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.11.18.624088. [PMID: 39605483 PMCID: PMC11601415 DOI: 10.1101/2024.11.18.624088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2024]
Abstract
Humans and other organisms make decisions choosing between different options, with the aim to maximize the reward and minimize the cost. The main theoretical framework for modeling the decision-making process has been based on the highly successful drift-diffusion model, which is a simple tool for explaining many aspects of this process. However, new observations challenge this model. Recently, it was found that inhibitory tone increases during high cognitive load and situations of uncertainty, but the origin of this phenomenon is not understood. Motivated by this observation, we extend a recently developed model for decision making while animals move towards targets in real space. We introduce an integrated Ising-type model, that includes global inhibition, and use it to explore its role in decision-making. This model can explain how the brain may utilize inhibition to improve its decision-making accuracy. Compared to experimental results, this model suggests that the regime of the brain's decision-making activity is in proximity to a critical transition line between the ordered and disordered. Within the model, the critical region near the transition line has the advantageous property of enabling a significant decrease in error with a small increase in inhibition and also exhibits unique properties with respect to learning and memory decay.
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Affiliation(s)
- Olga Tapinova
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Tal Finkelman
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot 76100, Israel
| | | | - Rony Paz
- Department of Brain Sciences, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Assaf Tal
- Department of Biomedical Engineering, Tel Aviv University, Tel Aviv 6997801, Israel
| | - Nir S. Gov
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot 76100, Israel
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Vankov II. The hazards of dealing with response time outliers. Front Psychol 2023; 14:1220281. [PMID: 37691812 PMCID: PMC10484222 DOI: 10.3389/fpsyg.2023.1220281] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Accepted: 08/07/2023] [Indexed: 09/12/2023] Open
Abstract
The presence of outliers in response times can affect statistical analyses and lead to incorrect interpretation of the outcome of a study. Therefore, it is a widely accepted practice to try to minimize the effect of outliers by preprocessing the raw data. There exist numerous methods for handling outliers and researchers are free to choose among them. In this article, we use computer simulations to show that serious problems arise from this flexibility. Choosing between alternative ways for handling outliers can result in the inflation of p-values and the distortion of confidence intervals and measures of effect size. Using Bayesian parameter estimation and probability distributions with heavier tails eliminates the need to deal with response times outliers, but at the expense of opening another source of flexibility.
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Affiliation(s)
- Ivan I. Vankov
- Institute of Neurobiology, Bulgarian Academy of Sciences, Sofia, Sofia City, Bulgaria
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Marmolejo-Ramos F, Barrera-Causil C, Kuang S, Fazlali Z, Wegener D, Kneib T, De Bastiani F, Martinez-Flórez G. Generalised exponential-Gaussian distribution: a method for neural reaction time analysis. Cogn Neurodyn 2023; 17:221-237. [PMID: 36704631 PMCID: PMC9871144 DOI: 10.1007/s11571-022-09813-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Revised: 03/23/2022] [Accepted: 04/15/2022] [Indexed: 01/29/2023] Open
Abstract
Reaction times (RTs) are an essential metric used for understanding the link between brain and behaviour. As research is reaffirming the tight coupling between neuronal and behavioural RTs, thorough statistical modelling of RT data is thus essential to enrich current theories and motivate novel findings. A statistical distribution is proposed herein that is able to model the complete RT's distribution, including location, scale and shape: the generalised-exponential-Gaussian (GEG) distribution. The GEG distribution enables shifting the attention from traditional means and standard deviations to the entire RT distribution. The mathematical properties of the GEG distribution are presented and investigated via simulations. Additionally, the GEG distribution is featured via four real-life data sets. Finally, we discuss how the proposed distribution can be used for regression analyses via generalised additive models for location, scale and shape (GAMLSS).
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Affiliation(s)
- Fernando Marmolejo-Ramos
- Centre for Change and Complexity in Learning, University of South Australia, Adelaide, 5000 Australia
| | - Carlos Barrera-Causil
- Facultad de Ciencias Exactas y Aplicadas, Instituto Tecnológico Metropolitano -ITM, Medellín, 050034 Colombia
| | - Shenbing Kuang
- Institute of Psychology, Chinese Academy of Sciences, Beijing, 100101 China
| | - Zeinab Fazlali
- School of Cognitive Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran ,Department of Psychiatry, Division of Integrative Neuroscience, Columbia University and the New York State Psychiatric Institute, New York, USA
| | - Detlef Wegener
- Brain Research Institute, Center for Cognitive Science, University of Bremen, Bremen, Germany
| | - Thomas Kneib
- Campus Institute Data Science (CIDAS) and Chair of Statistics, Georg-August-Universität Göttingen, Göttingen, Germany
| | - Fernanda De Bastiani
- Statistics Department, Federal University of Pernambuco, Recife, Pernambuco Brazil
| | - Guillermo Martinez-Flórez
- Departamento de Matemáticas y Estadística, Facultad de Ciencias, Universidad de Córdoba, Córdoba, 2300 Colombia ,Programa de Pós-Graduação em Modelagem e Métodos Quantitativos, Universidade Federal do Ceará, Fortaleza, Brazil
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Ashford JW, Clifford JO, Anand S, Bergeron MF, Ashford CB, Bayley PJ. Correctness and response time distributions in the MemTrax continuous recognition task: Analysis of strategies and a reverse-exponential model. Front Aging Neurosci 2022; 14:1005298. [PMID: 36437986 PMCID: PMC9682919 DOI: 10.3389/fnagi.2022.1005298] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2022] [Accepted: 10/17/2022] [Indexed: 07/24/2023] Open
Abstract
A critical issue in addressing medical conditions is measurement. Memory measurement is difficult, especially episodic memory, which is disrupted by many conditions. On-line computer testing can precisely measure and assess several memory functions. This study analyzed memory performances from a large group of anonymous, on-line participants using a continuous recognition task (CRT) implemented at https://memtrax.com. These analyses estimated ranges of acceptable performance and average response time (RT). For 344,165 presumed unique individuals completing the CRT a total of 602,272 times, data were stored on a server, including each correct response (HIT), Correct Rejection, and RT to the thousandth of a second. Responses were analyzed, distributions and relationships of these parameters were ascertained, and mean RTs were determined for each participant across the population. From 322,996 valid first tests, analysis of correctness showed that 63% of these tests achieved at least 45 correct (90%), 92% scored at or above 40 correct (80%), and 3% scored 35 correct (70%) or less. The distribution of RTs was skewed with 1% faster than 0.62 s, a median at 0.890 s, and 1% slower than 1.57 s. The RT distribution was best explained by a novel model, the reverse-exponential (RevEx) function. Increased RT speed was most closely associated with increased HIT accuracy. The MemTrax on-line memory test readily provides valid and reliable metrics for assessing individual episodic memory function that could have practical clinical utility for precise assessment of memory dysfunction in many conditions, including improvement or deterioration over time.
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Affiliation(s)
- J. Wesson Ashford
- War Related Illness and Injury Study Center, VA Palo Alto Health Care System, Palo Alto, CA, United States
- Department of Psychiatry and Behavioral Science, Stanford University, Palo Alto, CA, United States
| | - James O. Clifford
- Department of Psychology, College of San Mateo, San Mateo, CA, United States
| | - Sulekha Anand
- Department of Biological Sciences, San José State University, San Jose, CA, United States
| | - Michael F. Bergeron
- Department of Health Sciences, University of Hartford, West Hartford, CT, United States
| | | | - Peter J. Bayley
- War Related Illness and Injury Study Center, VA Palo Alto Health Care System, Palo Alto, CA, United States
- Department of Psychiatry and Behavioral Science, Stanford University, Palo Alto, CA, United States
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Marmolejo‐Ramos F, Ospina R, Hernández‐Barajas F. The place of probability distributions in statistical learning. A commented book review of ‘Distributions for modeling location, scale, and shape using GAMLSS in R’ by Rigby et al. (2021). AUST NZ J STAT 2022. [DOI: 10.1111/anzs.12374] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Fernando Marmolejo‐Ramos
- Center for Change and Complexity in Learning University of South Australia Adelaide South Australia Australia
| | - Raydonal Ospina
- Departamento de Estatística, CASTLab Universidade Federal de Pernambuco Recife Brazil
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Setting the space for deliberation in decision-making. Cogn Neurodyn 2021; 15:743-755. [PMID: 34603540 DOI: 10.1007/s11571-021-09681-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2020] [Revised: 03/12/2021] [Accepted: 04/16/2021] [Indexed: 10/21/2022] Open
Abstract
Decision-making models in the behavioral, cognitive, and neural sciences typically consist of forced-choice paradigms with two alternatives. While theoretically it is feasible to translate any decision situation to a sequence of binary choices, real-life decision-making is typically more complex and nonlinear, involving choices among multiple items, graded judgments, and deferments of decision-making. Here, we discuss how the complexity of real-life decision-making can be addressed using conventional decision-making models by focusing on the interactive dynamics between criteria settings and the collection of evidence. Decision-makers can engage in multi-stage, parallel decision-making by exploiting the space for deliberation, with non-binary readings of evidence available at any point in time. The interactive dynamics principally adhere to the speed-accuracy tradeoff, such that increasing the space for deliberation enables extended data collection. The setting of space for deliberation reflects a form of meta-decision-making that can, and should be, studied empirically as a value-based exercise that weighs the prior propensities, the economics of information seeking, and the potential outcomes. Importantly, the control of the space for deliberation raises a question of agency. Decision-makers may actively and explicitly set their own decision parameters, but these parameters may also be set by environmental pressures. Thus, decision-makers may be influenced-or nudged in a particular direction-by how decision problems are framed, with a sense of urgency or a binary definition of choice options. We argue that a proper understanding of these mechanisms has important practical implications toward the optimal usage of space for deliberation.
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Abstract
Data from some research fields tend to exhibit a positive skew. For example, in experimental psychology, reaction times (RTs) are characterised as being positively skewed. However, it is not unlikely that RTs can take a normal or, even, a negative shape. While the Ex-Gaussian distribution is suitable to model positively skewed data, it cannot cope with negatively skewed data. This manuscript proposes a distribution that can deal with both negative and positive skews: the exponential-centred skew-normal (ECSN) distribution. The mathematical properties of the proposed distribution are reported, and it is featured in two non-synthetic datasets.
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