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Wingfield LK, Atcharawiriyakul J, Jitprasitporn N. Diversity and characterization of culturable fungi associated with the marine sea cucumber Holothuria scabra. PLoS One 2024; 19:e0296499. [PMID: 38165907 PMCID: PMC10760727 DOI: 10.1371/journal.pone.0296499] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2023] [Accepted: 12/14/2023] [Indexed: 01/04/2024] Open
Abstract
Fungi associated with the marine echinoderm, Holothuria scabra, produces extracellular enzymes and bioactive metabolites, and mycoviruses that could be used for biotechnological and pharmaceutical applications. The species identification based on molecular and morphological characteristics classified the culturable fungi into twenty-three genera belonging to eight orders, Chaetothyriales, Eurotiales, Hypocreales, Mucorales, Mycosphaerellales, Onygenales, Pleosporales and Venturiales, from four classes, Eurotiomycetes, Dothideomycetes, Mucoromycetes and Sordariomycetes of the two phyla Ascomycota and Mucoromycota. The most frequent genera were Aspergillus (relative frequency, 45.30%) and Penicillium (relative frequency, 22.68%). The Menhinick species richness and Shannon species diversity indices were 1.64 and 2.36, respectively, indicating a high diversity of fungi. An enzymatic production test revealed that sixteen isolates could produce proteases and amylases at different levels. The presence of mycoviruses was detected in eight isolates with different genomic profiles. Thirty-two of the 55 isolates produced antimicrobial metabolites which had an inhibitory effect on various microbial pathogens. Most of these active isolates were identified as Aspergillus, Penicillium and Trichoderma. Notably, Aspergillus terreus F10M7, Trichoderma harzianum F31M4 and T. harzianum F31M5 showed the most potent activity against both Gram-positive and Gram-negative bacteria and human pathogenic fungi. Our study represents the first report of the mycobiota associated with the marine echinoderm Holothuria scabra.
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Affiliation(s)
| | - Jirawalan Atcharawiriyakul
- Division of Biological Science, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, Thailand
| | - Ninadia Jitprasitporn
- Division of Biological Science, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, Thailand
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Nehal F, Sahnoun M, Dab A, Sebaihia M, Bejar S, Jaouadi B. Production optimization, characterization, and covalent immobilization of a thermophilic Serratia rubidaea lipase isolated from an Algerian oil waste. Mol Biol Rep 2019; 46:3167-3181. [PMID: 30980268 DOI: 10.1007/s11033-019-04774-y] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2018] [Accepted: 03/19/2019] [Indexed: 11/29/2022]
Abstract
A new thermophilic non-induced lipase producer named Serratia rubidaea strain Nehal-mou was isolated from oil waste in Tissemsilat, Algeria. The most influential lipase production parameters were screened by the Plackett-Burman design for enhancing enzyme yield. An optimum condition of a 1.5% of glucose, a 0.01% of potassium, and a 0.025% of manganese contents resulted in a 41.13 U/mL. This yield was 6.29 times higher than the one achieved before the application of the Box-Behnken Design. Lipase activity showed a high organic solvent tolerance following its exposure to hexane, ethanol, methanol, and acetone. Lipase was also perfectly stable in the presence of 10 mM Fe2+, K+, and Na+ ions with more than 75% of the retaining activity. The enzyme half-life times were 22 h, 90 min, and 25 min at 50, 60, and 70 °C respectively. Polyvinyl alcohol (PVA)/boric acid/Starch/CaCO3 were utilized as a carrier for lipase covalent immobilization in order to be used efficiently. The Scanning Electron Microscopy (SEM) Technique and the Fourier Transform Infrared Spectroscopy (FTIR) Method confirmed the covalent bonding success and the excellent carrier characteristics. Thus, the immobilization yield reached 73.5% and the optimum temperature was shifted from 40 to 65 °C. The immobilized lipase kept 80% of its total activity after 10 cycles and had 3 and 3.2-fold half-lives at 70, and 80 °C respectively compared to the free enzyme.
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Affiliation(s)
- Fatima Nehal
- Faculty of Nature and Life Science, Department of Agricultural Sciences and Biotechnologies, Hassiba Benbouali University, Chlef, Algeria
| | - Mouna Sahnoun
- Laboratory of Microbial Biotechnology and Engineering Enzymes (LMBEE), Centre of Biotechnology of Sfax (CBS), University of Sfax, Sidi Mansour Road Km 6, P.O. Box 1177, Sfax, 3018, Tunisia.
| | - Ahlem Dab
- Laboratory of Microbial Biotechnology and Engineering Enzymes (LMBEE), Centre of Biotechnology of Sfax (CBS), University of Sfax, Sidi Mansour Road Km 6, P.O. Box 1177, Sfax, 3018, Tunisia
| | - Mohammed Sebaihia
- Laboratory of Molecular Biology, Genomics and Bioinformatics, Faculty of Nature and Life Science, Hassiba Benbouali University, Chlef, Hay Essalam, 02000, Algeria
| | - Samir Bejar
- Laboratory of Microbial Biotechnology and Engineering Enzymes (LMBEE), Centre of Biotechnology of Sfax (CBS), University of Sfax, Sidi Mansour Road Km 6, P.O. Box 1177, Sfax, 3018, Tunisia
| | - Bassem Jaouadi
- Laboratory of Microbial Biotechnology and Engineering Enzymes (LMBEE), Centre of Biotechnology of Sfax (CBS), University of Sfax, Sidi Mansour Road Km 6, P.O. Box 1177, Sfax, 3018, Tunisia
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Navvabi A, Razzaghi M, Fernandes P, Karami L, Homaei A. Novel lipases discovery specifically from marine organisms for industrial production and practical applications. Process Biochem 2018. [DOI: 10.1016/j.procbio.2018.04.018] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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Zarinviarsagh M, Ebrahimipour G, Sadeghi H. Lipase and biosurfactant from Ochrobactrum intermedium strain MZV101 isolated by washing powder for detergent application. Lipids Health Dis 2017; 16:177. [PMID: 28923075 PMCID: PMC5604193 DOI: 10.1186/s12944-017-0565-8] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2017] [Accepted: 09/06/2017] [Indexed: 01/11/2023] Open
Abstract
Background Alkaline thermostable lipase and biosurfactant producing bacteria are very interested at detergent applications, not only because of their eco-friendly characterize, but alsoproduction lipase and biosurfactant by using cheap materials. Ochrobactrum intermedium strain MZV101 was isolated as washing powder resistant, alkaline thermostable lipase and biosurfactant producing bacterium in order to use at detergent applications. Methods O. intermedium strain MZV101 produces was lipase and biosurfactant in the same media with pH 10 and temperature of 60 °C. Washing test and some detergent compatibility character of lipase enzyme and biosurfactant were assayed. The antimicrobial activity evaluated against various bacteria and fungi. Results Lipase and biosurfactant produced by O. intermedium strain MZV101 exhibited high stability at pH 10–13 and temperature of 70–90 °C, biosurfactant exhibits good stability at pH 9–13 and thermostability in all range. Both lipase and biosurfactant were found to be stable in the presence of different metal ions, detergents and organic solvents. The lipase enzyme extracted using isopropanol with yield of 69.2% and biosurfactant with ethanol emulsification index value of 70.99% and yield of 9.32 (g/l). The single band protein after through from G-50 Sephadex column on SDS-PAGE was calculated to be 99.42 kDa. Biosurfactant O. intermedium strain MZV101 exhibited good antimicrobial activity against Gram-negative bacteria and against various bacterial pathogens. Based upon washing test biosurfactant and lipase O. intermedium strain MZV101considered being strong oil removal. Conclusion The results of this study indicate that isolated lipase and biosurfactant with strong oil removal, antimicrobial activity and good stability could be useful for detergent applications. Graphical abstract ![]()
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Affiliation(s)
- Mina Zarinviarsagh
- Department of Microbiology and Microbial Biotechnology, Faculty of Biological Sciences and Technology, University of Shahid-Beheshty, Daneshjou Blvd. Evin St.1983969411, Tehran, Iran.
| | - Gholamhossein Ebrahimipour
- Department of Microbiology and Microbial Biotechnology, Faculty of Biological Sciences and Technology, University of Shahid-Beheshty, Daneshjou Blvd. Evin St.1983969411, Tehran, Iran
| | - Hossein Sadeghi
- Department of Microbiology and Microbial Biotechnology, Faculty of Biological Sciences and Technology, University of Shahid-Beheshty, Daneshjou Blvd. Evin St.1983969411, Tehran, Iran
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Marine microbes as a valuable resource for brand new industrial biocatalysts. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2017. [DOI: 10.1016/j.bcab.2017.06.013] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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Characterization of Crude and Partially Purified Lipase fromGeotrichum candidumObtained with Different Nitrogen Sources. J AM OIL CHEM SOC 2016. [DOI: 10.1007/s11746-016-2875-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Patnala HS, Kabilan U, Gopalakrishnan L, Rao RMD, Kumar DS. Marine Fungal and Bacterial Isolates for Lipase Production: A Comparative Study. ADVANCES IN FOOD AND NUTRITION RESEARCH 2016; 78:71-94. [PMID: 27452166 DOI: 10.1016/bs.afnr.2016.06.001] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Lipases, belonging to the class of enzymes called hydrolases, can catalyze triglycerides to fatty acids and glycerol. They are produced by microbes of plant and animal origin, and also by marine organisms. As marine microorganisms thrive in extreme conditions, lipases isolated from their origin possess characteristics of extremozymes, retain its activity in extreme conditions and can catalyze few chemical reactions which are impossible otherwise relative to the lipase produced from terrestrial microorganisms. Lipases are useful in many industries like detergent, food, leather, pharmaceutical, diary, etc. Few commercial enzymes have been developed and the use of them in certain industries like dairy, soaps are proved to be beneficial. There are few research papers reporting the production of lipase from marine bacteria and fungi. Lipase production involves two types of fermentation processes-solid-state fermentation (SSF) and submerged fermentation (SmF). Although SmF process is used conventionally, SSF process produces lipase in higher amounts. The production is also influenced by the composition of the medium, physiochemical parameters like temperature, pH, carbon, and nitrogen sources.
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Affiliation(s)
- H S Patnala
- Indian Institute of Technology, Hyderabad, Telangana, India
| | - U Kabilan
- School of Bioengineering, SRM University, Kattankulattur, Tamil Nadu, India
| | | | - R M D Rao
- Indian Institute of Technology, Hyderabad, Telangana, India
| | - D S Kumar
- Indian Institute of Technology, Hyderabad, Telangana, India.
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Mazzucotelli CA, Moreira MDR, Ansorena MR. Statistical optimization of medium components and physicochemical parameters to simultaneously enhance bacterial growth and esterase production by Bacillus thuringiensis. Can J Microbiol 2015; 62:24-34. [PMID: 26529589 DOI: 10.1139/cjm-2015-0463] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Bacillus thuringiensis is a genus extensively studied because of its high potential for biotechnological application, principally in biocontrol techniques. However, the optimization of esterase production by this strain has been scarcely studied. The aim of this work was to select and optimize the physicochemical and nutritional parameters that significantly influence the growth and esterase production of B. thuringiensis. To this purpose, 6 nutritional factors and 2 physicochemical parameters were evaluated using a Plackett-Burman design. Significant variables were optimized using a Box-Behnken design and through the desirability function to select the levels of the variables that simultaneously maximize microbial growth and esterase production. The optimum conditions resulting from simultaneous optimization of the responses under study were found to be 1 g/L glucose, 15 g/L peptone, and 3.25 g/L NaCl. Under these optimal conditions, it was possible to achieve a 2.5 log CFU/mL increase in bacterial growth and a 113-fold increase in esterase productivity, compared with minimal medium without agitation.
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Affiliation(s)
- Cintia Anabela Mazzucotelli
- Grupo de Investigación en Ingeniería en Alimentos Facultad de Ingeniería, Universidad Nacional de Mar del Plata, Juan B. Justo 4302, CP B7608FDQ, Mar del Plata, Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina.,Grupo de Investigación en Ingeniería en Alimentos Facultad de Ingeniería, Universidad Nacional de Mar del Plata, Juan B. Justo 4302, CP B7608FDQ, Mar del Plata, Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
| | - María del Rosario Moreira
- Grupo de Investigación en Ingeniería en Alimentos Facultad de Ingeniería, Universidad Nacional de Mar del Plata, Juan B. Justo 4302, CP B7608FDQ, Mar del Plata, Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina.,Grupo de Investigación en Ingeniería en Alimentos Facultad de Ingeniería, Universidad Nacional de Mar del Plata, Juan B. Justo 4302, CP B7608FDQ, Mar del Plata, Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
| | - María Roberta Ansorena
- Grupo de Investigación en Ingeniería en Alimentos Facultad de Ingeniería, Universidad Nacional de Mar del Plata, Juan B. Justo 4302, CP B7608FDQ, Mar del Plata, Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina.,Grupo de Investigación en Ingeniería en Alimentos Facultad de Ingeniería, Universidad Nacional de Mar del Plata, Juan B. Justo 4302, CP B7608FDQ, Mar del Plata, Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
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Bonugli-Santos RC, dos Santos Vasconcelos MR, Passarini MRZ, Vieira GAL, Lopes VCP, Mainardi PH, dos Santos JA, de Azevedo Duarte L, Otero IVR, da Silva Yoshida AM, Feitosa VA, Pessoa A, Sette LD. Marine-derived fungi: diversity of enzymes and biotechnological applications. Front Microbiol 2015; 6:269. [PMID: 25914680 PMCID: PMC4392690 DOI: 10.3389/fmicb.2015.00269] [Citation(s) in RCA: 89] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2014] [Accepted: 03/18/2015] [Indexed: 01/19/2023] Open
Abstract
The ocean is considered to be a great reservoir of biodiversity. Microbial communities in marine environments are ecologically relevant as intermediaries of energy, and play an important role in nutrient regeneration cycles as decomposers of dead and decaying organic matter. In this sense, marine-derived fungi can be considered as a source of enzymes of industrial and/or environmental interest. Fungal strains isolated from different substrates, such as invertebrates, decaying wood, seawater, sediments, and mangrove detritus, have been reported to be producers of hydrolytic and/or oxidative enzymes, with alginate lyase, amylase, cellulase, chitinase, glucosidase, inulinase, keratinase, ligninase, lipase, nuclease, phytase, protease, and xylanase being among the enzymes produced by fungi of marine origin. These enzymes present temperature and pH optima ranging from 35 to 70(∘)C, and 3.0 to 11.0, respectively. High-level production in bioreactors is mainly performed using submerged-state fermentation. Certain marine-derived fungal strains present enzymes with alkaline and cold-activity characteristics, and salinity is considered an important condition in screening and production processes. The adaptability of marine-derived fungi to oceanic conditions can be considered an attractive point in the field of fungal marine biotechnology. In this review, we focus on the advances in discovering enzymes from marine-derived fungi and their biotechnological relevance.
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Affiliation(s)
- Rafaella C. Bonugli-Santos
- Instituto Latino Americano de Ciências da Vida e da Natureza, Centro Interdisciplinar de Ciências da Vida, Universidade Federal da Integração Latino-AmericanaParaná, Brazil
| | - Maria R. dos Santos Vasconcelos
- Divisão de Recursos Microbianos, Centro Pluridisciplinar de Pesquisas Químicas, Biológicas e Agrícolas, Universidade Estadual de CampinasPaulínia, Brazil
| | - Michel R. Z. Passarini
- Divisão de Recursos Microbianos, Centro Pluridisciplinar de Pesquisas Químicas, Biológicas e Agrícolas, Universidade Estadual de CampinasPaulínia, Brazil
| | - Gabriela A. L. Vieira
- Laboratório de Micologia Ambiental e Industrial, Departamento de Bioquímica e Microbiologia, Instituto de Biociências, Universidade Estadual Paulista Júlio de Mesquita FilhoRio Claro, Brazil
| | - Viviane C. P. Lopes
- Laboratório de Micologia Ambiental e Industrial, Departamento de Bioquímica e Microbiologia, Instituto de Biociências, Universidade Estadual Paulista Júlio de Mesquita FilhoRio Claro, Brazil
| | - Pedro H. Mainardi
- Laboratório de Micologia Ambiental e Industrial, Departamento de Bioquímica e Microbiologia, Instituto de Biociências, Universidade Estadual Paulista Júlio de Mesquita FilhoRio Claro, Brazil
| | - Juliana A. dos Santos
- Laboratório de Micologia Ambiental e Industrial, Departamento de Bioquímica e Microbiologia, Instituto de Biociências, Universidade Estadual Paulista Júlio de Mesquita FilhoRio Claro, Brazil
| | - Lidia de Azevedo Duarte
- Laboratório de Micologia Ambiental e Industrial, Departamento de Bioquímica e Microbiologia, Instituto de Biociências, Universidade Estadual Paulista Júlio de Mesquita FilhoRio Claro, Brazil
| | - Igor V. R. Otero
- Laboratório de Micologia Ambiental e Industrial, Departamento de Bioquímica e Microbiologia, Instituto de Biociências, Universidade Estadual Paulista Júlio de Mesquita FilhoRio Claro, Brazil
| | - Aline M. da Silva Yoshida
- Laboratório de Micologia Ambiental e Industrial, Departamento de Bioquímica e Microbiologia, Instituto de Biociências, Universidade Estadual Paulista Júlio de Mesquita FilhoRio Claro, Brazil
| | - Valker A. Feitosa
- Departamento de Tecnologia Bioquímico-Farmacêutica, Faculdade de Ciências Farmacêuticas, Universidade de São PauloSão Paulo, Brazil
| | - Adalberto Pessoa
- Departamento de Tecnologia Bioquímico-Farmacêutica, Faculdade de Ciências Farmacêuticas, Universidade de São PauloSão Paulo, Brazil
| | - Lara D. Sette
- Divisão de Recursos Microbianos, Centro Pluridisciplinar de Pesquisas Químicas, Biológicas e Agrícolas, Universidade Estadual de CampinasPaulínia, Brazil
- Laboratório de Micologia Ambiental e Industrial, Departamento de Bioquímica e Microbiologia, Instituto de Biociências, Universidade Estadual Paulista Júlio de Mesquita FilhoRio Claro, Brazil
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Nalder TD, Marshall S, Pfeffer FM, Barrow CJ. Characterisation of lipase fatty acid selectivity using novel omega-3 pNP-acyl esters. J Funct Foods 2014. [DOI: 10.1016/j.jff.2013.10.015] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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Hunzicker GM. A novel regulatory system in plants involving medium-chain fatty acids. PLANTA 2009; 231:143-53. [PMID: 19876644 DOI: 10.1007/s00425-009-1032-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2009] [Accepted: 10/02/2009] [Indexed: 05/28/2023]
Abstract
Polyethylene glycol sorbitan monoacylates (Tween) are detergents of widespread use in plant sciences. However, little is known about the plant response to these compounds. Interestingly, the structure of Tweens' detergents (especially from Tween 20) resembles the lipid A structure from gram-negative bacteria polysaccharides (a backbone with short saturated fatty acids). Thus, different assays (microarray, GC-MS, RT-PCR, Northern blots, alkalinization and mutant analyses) were conducted in order to elucidate physiological changes in the plant response to Tween 20 detergent. Tween 20 causes a rapid and complex change in transcript abundance which bears all characteristics of a pathogenesis-associated molecular pattern (PAMP)/elicitor-induced defense response, and they do so at concentrations which cause no detectable deleterious effects on plant cellular integrity. In the present work, it is shown that the PAMP/elicitor-induced defense responses are caused by medium-chain fatty acids which are efficiently released from the Tween backbone by the plant, notably lauric acid (12:0) and methyl lauric acid. These compounds induce the production of ethylene, medium alkalinization and gene activation in a jasmonate-independent manner. Medium-chain fatty acids are thus novel elicitors/regulators of plant pathogen defense as they have being proved in animals.
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Affiliation(s)
- Gretel Mara Hunzicker
- Instituto Multidisciplinario de Biología Vegetal, CONICET-Universidad Nacional de Córdoba, Av. Vélez Sarsfield 299, Casilla de Correo 495, Córdoba, 5000, Argentina.
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Wei HN, Shi LL, Wu B. Production and Characteristics of an Enantioselective Lipase fromBurkholderia sp. GXU56. Chem Eng Technol 2008. [DOI: 10.1002/ceat.200700348] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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