A Fractal-Like Kinetic Equation to Investigate Temperature Effect on Cellulose Hydrolysis by Free and Immobilized Cellulase

Whole genome sequencing and the lignocellulose degradation potential of Bacillus subtilis RLI2019 isolated from the intestine of termites

BACKGROUND

Lignocellulosic biomass is the most abundant and renewable terrestrial raw material for conversion into bioproducts and biofuels. However, the low utilization efficiency of lignocellulose causes environmental pollution and resource waste, which limits the large-scale application of bioconversion. The degradation of lignocellulose by microorganisms is an efficient and cost-effective way to overcome the challenge of utilizing plant biomass resources. This work aimed to screen valuable cellulolytic bacteria, explore its molecular mechanism from genomic insights, and investigate the ability of the strain to biodegrade wheat straw.

RESULTS

Bacillus subtilis (B. subtilis) RLI2019 was isolated from the intestine of Reticulitermes labralis. The strain showed comprehensive enzyme activities related to lignocellulose degradation, which were estimated as 4.06, 1.97, 4.12, 0.74, and 17.61 U/mL for endoglucanase, β-glucosidase, PASC enzyme, filter paper enzyme, and xylanase, respectively. Whole genome sequencing was performed to better understand the genetic mechanism of cellulose degradation. The genome size of B. subtilis RLI2019 was 4,195,306 bp with an average GC content of 43.54%, and the sequence characteristics illustrated an extremely high probability (99.41%) as a probiotic. The genome contained 4,381 protein coding genes with an average GC content of 44.20%, of which 145 genes were classified into six carbohydrate-active enzyme (CAZyme) families and 57 subfamilies. Eight cellulose metabolism enzyme-related genes and nine hemicellulose metabolism enzyme-related genes were annotated by the CAZyme database. The starch and sucrose metabolic pathway (ko00500) was the most enriched with 46 genes in carbohydrate metabolism. B. subtilis RLI2019 was co-cultured with wheat straw for 7 days of fermentation, the contents of neutral detergent fiber, acid detergent fiber, hemicellulose, and lignin were significantly reduced by 5.8%, 10.3%, 1.0%, and 4.7%, respectively. Moreover, the wheat straw substrate exhibited 664.9 μg/mL of reducing sugars, 1.22 U/mL and 6.68 U/mL of endoglucanase and xylanase activities, respectively. Furthermore, the fiber structures were effectively disrupted, and the cellulose crystallinity was significantly reduced from 40.2% to 36.9%.

CONCLUSIONS

The complex diversity of CAZyme composition mainly contributed to the strong cellulolytic attribute of B. subtilis RLI2019. These findings suggest that B. subtilis RLI2019 has favorable potential for biodegradation applications, thus it can be regarded as a promising candidate bacterium for lignocellulosic biomass degradation.

Pretreatment of corn stover by torrefaction for improving reducing sugar and biohydrogen production

The torrefaction pretreatment technology with different temperature varying from 160℃ to 240℃ was utilized to enhance the enzymatic saccharification and hydrogen production potential of corn stover. The composition characteristics, Crystal Intensity (CrI), reducing sugars yield and hydrogen production of the pretreated corn stover were detected to explore the torrefaction pretreatment effectiveness. Results revealed that the reducing sugar yield and hydrogen production from corn stover were improved significantly through torrefaction pretreatment, both the maximum reducing sugar yield of 427.86 ± 19 mg/g Total solid(TS) and hydrogen yield of 123.72 mL/g TS were obtained at 200 ℃, increased by 46.41% and 70.79%, respectively. The kinetic parameters from Gompertz model showed torrefaction pretreatment could shorten the lag phase time of enzymatic saccharification and hydrogen production. The reducing sugar data can be fitted well by fractal-like kinetic model and Gompertz model.

High yielding, one-step mechano-enzymatic hydrolysis of cellulose to cellulose nanocrystals without bulk solvent

Traditional methods of enzymatic hydrolysis of cellulose to cellulose nanocrystals (CNCs) are limited due to the low enzymatic efficiency and large amount of waste liquid. The purpose of this study is to improve the yield and production efficiency of CNCs by enzymatic hydrolysis. A one-step mechano-enzymatic hydrolysis method was developed by utilizing the synergy of wet grinding and enzymatic hydrolysis reaction to efficiently prepare CNCs. Under the optimal reaction conditions, the maximum CNCs yield of 49.3% was achieved with higher thermal stability and crystallinity index of 76.7%. Mechano-enzymatic hydrolysis followed the first order pseudo-kinetics, and fractal kinetics demonstrated that mechanical force of rotation speed affected the fractal dimensions and binding ability between substrate and enzyme. This study provides an alternative method to prepare CNCs, which can significantly avoid the use of bulk water, improve the production efficiency of CNCs and thus lower the production cost.

Optimization of alkali-treated poplar fiber saccharification using metal ions and surfactants

In this study, contrary to untreated poplar fiber, processing of alkali-treated poplar fiber was optimized for the enzymatic saccharification. Considering reducing sugar content as the evaluation index, pH, temperature, time, amount of enzyme, and rotational speed of shaker were standardized to optimize the sugar production by enzymatic hydrolysis. Using response surface methodology, the optimum technological condition of enzymatic hydrolysis was found to be utilizing 43 mg cellulase at 46 °C for 50 h. At this, the sugar conversion amount of NaOH or H₂O₂-NaOH pretreated poplar was 164.62 mg/g and 218.82 mg/g respectively. It was a corresponding increase of 446.73% or 626.75% than that of poplar fiber without a pretreatment. At a low concentration, metal ions and surfactants promoted the conversion of reducing sugar. Especially, 0.01 g/L Mn²⁺ and 0.50 g/L hexadecyl trimethyl ammonium bromide (CTAB) produced the best effect and increased the conversion rate of reducing sugar by 23.62% and 21.44% respectively. Also, the effect of the combination of metal ions and surfactants was better than that of a single accelerator. By improving the enzymatic process, these findings could enhance the utilization of poplar fiber for the production of reducing sugar.

Thermoactivation of a cellobiohydrolase

We have measured activity and substrate affinity of the thermostable cellobiohydrolase, Cel7A, from Rasamsonia emersonii over a broad range of temperatures. For the wild type enzyme, which does not have a Carbohydrate Binding Module (CBM), higher temperature only led to moderately increased activity against cellulose, and we ascribed this to a pronounced, temperature induced desorption of enzyme from the substrate surface. We also tested a "high affinity" variant of R. emersonii Cel7A with a linker and CBM from a related enzyme. At room temperature, the activity of the variant was similar to the wild type, but the variant was more accelerated by temperature and about two-fold faster around 70 °C. This better thermoactivation of the high-affinity variant could not be linked to differences in stability or the catalytic process, but coincided with less desorption as temperature increased. Based on these observations and earlier reports on moderate thermoactivation of cellulases, we suggest that better cellulolytic activity at industrially relevant temperatures may be attained by engineering improved substrate affinity into enzymes that already possess good thermostability.

Temperature Effects on Kinetic Parameters and Substrate Affinity of Cel7A Cellobiohydrolases

We measured hydrolytic rates of four purified cellulases in small increments of temperature (10-50 °C) and substrate loads (0-100 g/liter) and analyzed the data by a steady state kinetic model that accounts for the processive mechanism. We used wild type cellobiohydrolases (Cel7A) from mesophilic Hypocrea jecorina and thermophilic Rasamsonia emersonii and two variants of these enzymes designed to elucidate the role of the carbohydrate binding module (CBM). We consistently found that the maximal rate increased strongly with temperature, whereas the affinity for the insoluble substrate decreased, and as a result, the effect of temperature depended strongly on the substrate load. Thus, temperature had little or no effect on the hydrolytic rate in dilute substrate suspensions, whereas strong temperature activation (Q10 values up to 2.6) was observed at saturating substrate loads. The CBM had a dual effect on the activity. On one hand, it diminished the tendency of heat-induced desorption, but on the other hand, it had a pronounced negative effect on the maximal rate, which was 2-fold larger in variants without CBM throughout the investigated temperature range. We conclude that although the CBM is beneficial for affinity it slows down the catalytic process. Cel7A from the thermophilic organism was moderately more activated by temperature than the mesophilic analog. This is in accord with general theories on enzyme temperature adaptation and possibly relevant information for the selection of technical cellulases.

Hydrolysis of cellobiose to monosaccharide catalyzed by functional Lanthanum(iii) metallomicelle

Cellobiose could be effectively hydrolyzed to monosaccharide (glucose, fructose and 1,6-anhydroglucose) by the catalysis of metallomicelle La(DMBO)₂under mild conditions.