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Narayanan A, Jeyaram K, Prabhu AA, Krishnan S, Kunjiappan S, Baskaran N, Murugan D. Cellulase from Halomonas elongata for biofuel application: enzymatic characterization and inhibition tolerance investigation. Prep Biochem Biotechnol 2025:1-18. [PMID: 39838840 DOI: 10.1080/10826068.2025.2453727] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2025]
Abstract
Halophilic bacteria are promising candidates for biofuel production because of their efficient cellulose degradation. Their cellulases exhibit high activity, even in the presence of inhibitors and under extreme conditions, making them ideal for biorefinery applications. In this study, we isolated a strain of Halomonas elongata (Kadal6) from decomposed cotton cloth on a Rameshwaram seashore. Morphological, biochemical, and 16S rRNA analyses revealed that Kadal6 was 99.93% similar to the cellulase-producing strain, H. elongata MH25661. The tolerance of the cellulase to inhibitors was assessed through molecular docking with a cellulase model of MH25661 generated by I-TASSER and experimentally using response surface methodology (RSM) with Kadal6. A molecular docking study indicated a high inhibition constant for ethanol, hydroxymethylfurfural (HMF), and furfural. Cellulase from H. elongata Kadal6 (CellHe) showed a maximum inhibition rate of 44.27% at 55 °C, 15% ethanol, and 6.5 g/L furfural and HMF. The enzyme retained 50% of its activity in the presence of these inhibitors, and remained unaffected at 1 g/L furfural and HMF, although inhibition occurred at 3 g/L. H. elongata cellulase demonstrated significant tolerance to inhibition both in vitro (RSM) and in silico, indicating its potential for biorefinery applications in harsh environments.
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Affiliation(s)
- Aathimoolam Narayanan
- Department of Biotechnology, Kalasalingam Academy of Research and Education, Krishnankovil, Tamil Nadu, India
| | - Kanimozhi Jeyaram
- Department of Biotechnology, Kalasalingam Academy of Research and Education, Krishnankovil, Tamil Nadu, India
| | - Ashish A Prabhu
- Department of Biotechnology, National Institute of Technology, Warangal, Telangana, India
| | - Sundar Krishnan
- Department of Biotechnology, Kalasalingam Academy of Research and Education, Krishnankovil, Tamil Nadu, India
| | - Selvaraj Kunjiappan
- Department of Biotechnology, Kalasalingam Academy of Research and Education, Krishnankovil, Tamil Nadu, India
| | - Nareshkumar Baskaran
- Department of Chemical Engineering and Biotechnology, National Taipei University of Technology, Taipei, Taiwan
| | - Dharanidharan Murugan
- Department of Biotechnology, Kalasalingam Academy of Research and Education, Krishnankovil, Tamil Nadu, India
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Ali I, Abdullah R, Saqib S, Nisar K, Kaleem A, Iqtedar M, Iqbal I, Chen X. Statistical optimization of pectinases from thermophilic Aspergillus fumigatus BT-4 employing response surface methodology through submerged fermentation using agricultural wastes. BMC Biotechnol 2025; 25:1. [PMID: 39755623 DOI: 10.1186/s12896-024-00942-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2024] [Accepted: 12/30/2024] [Indexed: 01/06/2025] Open
Abstract
BACKGROUND In this study, thermophilic pectinase-producing strains were isolated. Among all the isolates, strain No. 4 was identified as Aspergillus fumigatus BT-4 based on its morphology and 18 S rDNA analysis. This strain was employed to screen various fermentation media to enhance pectinase production. Pectinases are crucial enzymes with significant industrial applications, particularly in the food and textile industries. Identifying efficient pectinase producers and optimizing their production processes are essential for improving industrial applications. RESULTS Maximum pectinase production was observed using 1% grapefruit peel in M5 media. Shake flask kinetics demonstrated the highest values of specific rate constant (qp), specific growth rate (µ), product yield coefficient (Yp/x), volumetric rate of product formation (Qp), and biomass formation (Qx) after 72 h of incubation. Furthermore, Optimization of fermentation components via Response Surface Methodology (RSM) improved pectinase production by 50%, showcasing the effectiveness of factorial and central composite designs in fine-tuning parameters. The use of agricultural waste (grapefruit peel) significantly reduced production costs, offering an economically viable substrate alternative. The pectinase enzyme was purified through ammonium sulfate precipitation, gel filtration, and ion-exchange chromatography, resulting in a 2.3-fold purification. The molecular weight of the purified enzyme was determined to be 48 kDa. Enzyme kinetics, determined using a Lineweaver-Burk plot at various pectin concentrations, showed a Vmax of 32.7 UmL- 1 and a Km of 0.3 mg mL- 1. Thermodynamic parameters, including activation energy (Ea), enthalpy (ΔH), and entropy (ΔS), were measured at 41.74 kJmol- 1, 39.53 kJmol- 1, and 46.9 kJmol- 1, respectively. CONCLUSIONS The study successfully isolated and identified Aspergillus fumigatus BT-4 as a potent thermophilic pectinase producer. Optimization of the fermentation process using 1% grapefruit peel in M5 media significantly enhanced pectinase production. Using grapefruit peel as an agricultural waste in pectinase production reduces costs by eliminating the need for expensive raw materials and utilizing a low-cost, sustainable, and locally available substrate. This approach also minimizes waste disposal expenses, making the process more economical. The enzyme was effectively purified, and its kinetic and thermodynamic properties were thoroughly characterized, revealing its potential for industrial applications. The comprehensive analysis of production kinetics and optimization strategies provides a robust foundation for scaling up pectinase production, contributing to more efficient and cost-effective industrial processes.
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Affiliation(s)
- Imran Ali
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China.
- Institute of Molecular Biology and Biotechnology, University of Lahore, Lahore, Pakistan.
- Institute of Biochemistry, University of Balochistan, Quetta, Pakistan.
| | - Roheena Abdullah
- Department of Biotechnology, Lahore College for Women University, Lahore, Pakistan.
| | - Sana Saqib
- Department of Biotechnology, Lahore College for Women University, Lahore, Pakistan
| | - Kinza Nisar
- Department of Biotechnology, Lahore College for Women University, Lahore, Pakistan
| | - Afshan Kaleem
- Department of Biotechnology, Lahore College for Women University, Lahore, Pakistan
| | - Mehwish Iqtedar
- Department of Biotechnology, Lahore College for Women University, Lahore, Pakistan
| | - Irfana Iqbal
- Department of Biotechnology, Lahore College for Women University, Lahore, Pakistan
| | - Xiaoming Chen
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China.
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Pócsi I, Dijksterhuis J, Houbraken J, de Vries RP. Biotechnological potential of salt tolerant and xerophilic species of Aspergillus. Appl Microbiol Biotechnol 2024; 108:521. [PMID: 39560743 DOI: 10.1007/s00253-024-13338-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2024] [Revised: 10/17/2024] [Accepted: 10/18/2024] [Indexed: 11/20/2024]
Abstract
Xerophilic fungi occupy versatile environments owing to their rich arsenal helping them successfully adapt to water constraints as a result of low relative humidity, high-osmolarity, and high-salinity conditions. The general term xerophilic fungi relates to organisms that tolerate and/or require reduced water activity, while halophilic and osmophilic are applied to specialized groups that require high salt concentrations or increased osmotic pressure, respectively. Species belonging to the family Aspergillaceae, and especially those classified in Aspergillus subgenus Aspergillus (sections Restricti and Aspergillus) and Polypaecilum, are particularly enriched in the group of osmophilic and salt-tolerant filamentous fungi. They produce an unprecedently wide spectrum of salt tolerant enzymes including proteases, peptidases, glutaminases, γ-glutamyl transpeptidases, various glycosidases such as cellulose-decomposing and starch-degrading hydrolases, lipases, tannases, and oxidareductases. These extremophilic fungi also represent a huge untapped treasure chest of yet-to-be-discovered, highly valuable, biologically active secondary metabolites. Furthermore, these organisms are indispensable agents in decolorizing textile dyes, degrading xenobiotics and removing excess ions in high-salt environments. They could also play a role in fermentation processes at low water activity leading to the preparation of daqu, meju, and tea. Considering current and future agricultural applications, salt-tolerant and osmophilic Aspergilli may contribute to the biosolubilization of phosphate in soil and the amelioration salt stress in crops. Transgenes from halophile Aspergilli may find promising applications in the engineering of salt stress and drought-tolerant agricultural crops. Aspergilli may also spoil feed and food and raise mycotoxin concentrations above the permissible doses and, therefore, the development of novel feed and food preservation technologies against these Aspergillus spp. is also urgently needed. On the other hand, some xerophilic Aspergilli have been shown to be promising biological control agents against mites. KEY POINTS: • Salt tolerant and osmophilic Aspergilli can be found in versatile environments • These fungi are rich resources of valuable enzymes and secondary metabolites • Biotechnological and agricultural applications of these fungi are expanding.
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Affiliation(s)
- István Pócsi
- Department of Molecular Biotechnology and Microbiology, Institute of Biotechnology, Faculty of Science and Technology, University of Debrecen, Egyetem tér 1., 4032, Debrecen, Hungary.
- HUN-REN-UD Fungal Stress Biology Research Group, Debrecen, Egyetem tér 1., 4032, Debrecen, Hungary.
| | - Jan Dijksterhuis
- Food and Indoor Mycology, Westerdijk Fungal Biodiversity Institute, Uppsalaan 8, 3584 CT, Utrecht, The Netherlands
| | - Jos Houbraken
- Food and Indoor Mycology, Westerdijk Fungal Biodiversity Institute, Uppsalaan 8, 3584 CT, Utrecht, The Netherlands
| | - Ronald P de Vries
- Fungal Physiology, Westerdijk Fungal Biodiversity Institute, Uppsalaan 8, 3584 CT, Utrecht, The Netherlands
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Ali I, Abdullah R, Saleem A, Nisar K, Kaleem A, Iqtedar M, Iqbal I, Chen X. Production, Characterization, Kinetics, and Thermodynamics Analysis of Amyloglucosidase from Fungal Consortium. Appl Biochem Biotechnol 2024:10.1007/s12010-024-05067-2. [PMID: 39331330 DOI: 10.1007/s12010-024-05067-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/19/2024] [Indexed: 09/28/2024]
Abstract
The current study aimed to produce an amyloglucosidase enzyme from the fungal consortium. The best amylolytic fungal consortia were identified as Alternaria alternata and Aspergillus niger through the 18S rDNA technique. Fermentation kinetics and various nutritional and cultural parameters were analyzed. Maximum production was obtained in M4 media, pH 5.5, 30 °C, and 4 mL inoculum at 150 rpm after 72 h of incubation. Along with that, sodium nitrate at 2.5%, maltose, beef extract 1%, zinc sulfate (0.1%), and Tween 80 (0.1%) supported the maximum amyloglucosidase production. Amyloglucosidase was partially purified up to 1.6 purification fold with a specific activity of 1.84 Umg-1 in a stepwise manner by ammonium sulfate purification, dialysis, and ion exchange chromatography. The AMG enzyme also revealed maximum activity at 50 °C with 5.0 pH. Upon the kinetic analysis, the specific yield coefficient Yp/x and volumetric rates Qp and Qx were also found to be significant in the above optimized conditions. The Km value 0.33 mg mL-1 and Vmax 26.31 U mL-1 were obtained at 1% soluble starch substrate. Thermodynamic parameters for soluble starch hydrolysis were as follows: ΔH = 48.78 kJ mol-1, (Ea) = - 46.0 kJ mol-1, and ΔS = - 43.10 J mol-1 K-1. This finding indicates the indigenously isolated fungal consortium can be the best candidate for industrial applications.
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Affiliation(s)
- Imran Ali
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China.
- Institute of Molecular Biology and Biotechnology, University of Lahore, Lahore, Pakistan.
- Institute of Biochemistry, University of Balochistan, Quetta, Pakistan.
| | - Roheena Abdullah
- Department of Biotechnology, Lahore College for Women University, Lahore, Pakistan.
| | - Asifa Saleem
- Department of Biotechnology, Lahore College for Women University, Lahore, Pakistan
| | - Kinza Nisar
- Department of Biotechnology, Lahore College for Women University, Lahore, Pakistan
| | - Afshan Kaleem
- Department of Biotechnology, Lahore College for Women University, Lahore, Pakistan
| | - Mehwish Iqtedar
- Department of Biotechnology, Lahore College for Women University, Lahore, Pakistan
| | - Irfana Iqbal
- Department of Biotechnology, Lahore College for Women University, Lahore, Pakistan
| | - Xiaoming Chen
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China.
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Sutaoney P, Rai SN, Sinha S, Choudhary R, Gupta AK, Singh SK, Banerjee P. Current perspective in research and industrial applications of microbial cellulases. Int J Biol Macromol 2024; 264:130639. [PMID: 38453122 DOI: 10.1016/j.ijbiomac.2024.130639] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 01/12/2024] [Accepted: 03/03/2024] [Indexed: 03/09/2024]
Abstract
The natural interactions between various bacteria, fungi, and other cellulolytic microorganisms destroy lignocellulosic polymers. The efficacy of this process is determined by the combined action of three main enzymes: endoglucanases, exo-glucanases, and β-glucosidase. The enzyme attacks the polymeric structure's β-1,4-linkages during the cellulose breakdown reaction. This mechanism is crucial for the environment as it recycles cellulose in the biosphere. However, there are problems with enzymatic cellulose breakdown, including complex cellulase structure, insufficient degradation efficacy, high production costs, and post-translational alterations, many of which are closely related to certain unidentified cellulase properties. These issues impede the practical use of cellulases. A developing area of research is the application of this similar paradigm for industrial objectives. Cellulase enzyme exhibits greater promise in many critical industries, including biofuel manufacture, textile smoothing and finishing, paper and pulp manufacturing, and farming. However, the study on cellulolytic enzymes must move forward in various directions, including increasing the activity of cellulase as well as designing peptides to give biocatalysts their desired attributes. This manuscript includes an overview of current research on different sources of cellulases, their production, and biochemical characterization.
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Affiliation(s)
- Priya Sutaoney
- Present address-Department of Microbiology, Kalinga University, Raipur 492101, Chhattisgarh, India; Microbiology Laboratory, School of Studies in Life Science, Pt. Ravishankar Shukla University, Raipur 492010, Chhattisgarh, India
| | - Sachchida Nand Rai
- Centre of Experimental Medicine and Surgery, Institute of Medical Sciences, Banaras Hindu University, Varanasi 221005, India
| | - Sakshi Sinha
- Present address-Department of Microbiology, Kalinga University, Raipur 492101, Chhattisgarh, India
| | - Rachana Choudhary
- Department of Microbiology, Shri Shankaracharya Mahavidyalaya, Junwani, Durg 490005, Chhattisgarh, India
| | - A K Gupta
- Microbiology Laboratory, School of Studies in Life Science, Pt. Ravishankar Shukla University, Raipur 492010, Chhattisgarh, India
| | - Santosh Kumar Singh
- Centre of Experimental Medicine and Surgery, Institute of Medical Sciences, Banaras Hindu University, Varanasi 221005, India.
| | - Paromita Banerjee
- Department of Cardiology, All India Institute of Medical Sciences, Rishikesh, 249203, Uttarakhand, India.
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6
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Ben Hmad I, Gargouri A. Halophilic filamentous fungi and their enzymes: Potential biotechnological applications. J Biotechnol 2024; 381:11-18. [PMID: 38159888 DOI: 10.1016/j.jbiotec.2023.12.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Revised: 12/12/2023] [Accepted: 12/15/2023] [Indexed: 01/03/2024]
Abstract
Recently, interest in the study of microorganisms growing under extreme conditions, particularly halophiles, has increased due to their potential use in industrial processes. Halophiles are the class of microorganisms that grow optimally at high NaCl concentrations and are capable of producing halophilic enzymes capable of catalyzing reactions under harsh conditions. So far, fungi are the least studied halophilic microorganisms, even though they have been shown to counteract these extreme conditions by producing secondary metabolites with very interesting properties. This review highlights mechanisms that allow halophilic fungi to adapt high salinity and the specificity of their enzymes to a spectrum of action in industrial and environmental applications. The peculiarities of these enzymes justify the urgent need to apply green alternative compounds in industries.
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Affiliation(s)
- Ines Ben Hmad
- Laboratory of Molecular Biology of Eukaryotes, Centre of Biotechnology of Sfax (CBS), University of Sfax, B.P "1177", Sfax 3018, Tunisia.
| | - Ali Gargouri
- Laboratory of Molecular Biology of Eukaryotes, Centre of Biotechnology of Sfax (CBS), University of Sfax, B.P "1177", Sfax 3018, Tunisia
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7
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Leadbeater DR, Bruce NC. Functional characterisation of a new halotolerant seawater active glycoside hydrolase family 6 cellobiohydrolase from a salt marsh. Sci Rep 2024; 14:3205. [PMID: 38332324 PMCID: PMC10853513 DOI: 10.1038/s41598-024-53886-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Accepted: 02/06/2024] [Indexed: 02/10/2024] Open
Abstract
Realising a fully circular bioeconomy requires the valorisation of lignocellulosic biomass. Cellulose is the most attractive component of lignocellulose but depolymerisation is inefficient, expensive and resource intensive requiring substantial volumes of potable water. Seawater is an attractive prospective replacement, however seawater tolerant enzymes are required for the development of seawater-based biorefineries. Here, we report a halophilic cellobiohydrolase SMECel6A, identified and isolated from a salt marsh meta-exo-proteome dataset with high sequence divergence to previously characterised cellobiohydrolases. SMECel6A contains a glycoside hydrolase family 6 (GH6) domain and a carbohydrate binding module family 2 (CBM2) domain. Characterisation of recombinant SMECel6A revealed SMECel6A to be active upon crystalline and amorphous cellulose. Mono- and oligosaccharide product profiles revealed cellobiose as the major hydrolysis product confirming SMECel6A as a cellobiohydrolase. We show SMECel6A to be halophilic with optimal activity achieved in 0.5X seawater displaying 80.6 ± 6.93% activity in 1 × seawater. Structural predictions revealed similarity to a characterised halophilic cellobiohydrolase despite sharing only 57% sequence identity. Sequential thermocycling revealed SMECel6A had the ability to partially reversibly denature exclusively in seawater retaining significant activity. Our study confirms that salt marsh ecosystems harbour enzymes with attractive traits with biotechnological potential for implementation in ionic solution based bioprocessing systems.
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Affiliation(s)
- Daniel R Leadbeater
- Centre for Novel Agricultural Products, Department of Biology, University of York, Heslington, York, YO10 5DD, UK.
| | - Neil C Bruce
- Centre for Novel Agricultural Products, Department of Biology, University of York, Heslington, York, YO10 5DD, UK.
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Sharma N, Agarwal A, Bijoy A, Pandit S, Sharma RK. Lignocellulolytic extremozymes and their biotechnological applications. Extremophiles 2023; 28:2. [PMID: 37950773 DOI: 10.1007/s00792-023-01314-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2023] [Accepted: 09/26/2023] [Indexed: 11/13/2023]
Abstract
Lignocellulolytic enzymes are used in different industrial and environmental processes. The rigorous operating circumstances of these industries, however, might prevent these enzymes from performing as intended. On the other side, extremozymes are enzymes produced by extremophiles that can function in extremely acidic or basic; hot or cold; under high or low salinity conditions. These severe conditions might denature the normal enzymes that are produced by mesophilic microorganisms. The increased stability of these enzymes has been contributed to a number of conformational modifications in their structures. These modifications may result from a few amino acid substitutions, an improved hydrophobic core, the existence of extra ion pairs and salt bridges, an increase in compactness, or an increase in positively charged amino acids. These enzymes are the best option for industrial and bioremediation activities that must be carried out under difficult conditions due to their improved stability. The review, therefore, discusses lignocellulolytic extremozymes, their structure and mechanisms along with industrial and biotechnological applications.
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Affiliation(s)
- Nikita Sharma
- Department of Biosciences, Manipal University Jaipur, Jaipur, 303007, Rajasthan, India
| | - Aditi Agarwal
- Department of Biosciences, Manipal University Jaipur, Jaipur, 303007, Rajasthan, India
| | - Ananya Bijoy
- Department of Biosciences, Manipal University Jaipur, Jaipur, 303007, Rajasthan, India
| | - Sunidhi Pandit
- Department of Biosciences, Manipal University Jaipur, Jaipur, 303007, Rajasthan, India
| | - Rakesh Kumar Sharma
- Department of Life Sciences, Chhatrapati Shahu Ji Maharaj University, Kanpur, India.
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Sorour AA, Olama ZA, El-Naggar MY, Ali SM. Bioprocess development for extraction and purification of cellulases from Aspergillus niger 3ASZ using statistical experimental design techniques. Int J Biol Macromol 2023; 242:124759. [PMID: 37150365 DOI: 10.1016/j.ijbiomac.2023.124759] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2023] [Revised: 05/01/2023] [Accepted: 05/02/2023] [Indexed: 05/09/2023]
Abstract
The amount of cellulosic materials is large and may lead to environmental pollution, so they can be converted into useful materials for use in food or energy. Statistical design (Plackett-Burman and Box-Behnken) was the main topic of this study and was used to optimize the effect of environmental factors on cellulase production by Aspergillus niger. Cellulase production using Plackett-Burman was 6.86-fold higher than the production of cellulase using the basal medium. B0X-Benken showed an increase in the cellulase production equal to 18 times compared to the basal medium, where the cellulase produced had an activity equal to 79.4 U/mL/min. Ammonium sulfate precipitation was applied to the crude enzyme, followed by sequential fractionation with an Amicon system. The Amicon was used to demonstrate the final volume, total enzyme activity, specific activity, purification fold, and yield of cellulase (partially purified enzyme). Numerous cellulolytic enzymes are abundant in Aspergillus species. All of the data showed that Aspergillus sp. might be a reliable source of industrially and economically useful cellulases. By statistically calculating the relevance of a large number of elements in one experiment using a multifactorial statistical design, time may be saved while still maintaining the validity of each component.
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Affiliation(s)
- Aman A Sorour
- Botany and Microbiology Department, Faculty of Science, Alexandria University, Egypt
| | - Zakia A Olama
- Botany and Microbiology Department, Faculty of Science, Alexandria University, Egypt
| | - Moustafa Y El-Naggar
- Botany and Microbiology Department, Faculty of Science, Alexandria University, Egypt
| | - Safaa M Ali
- Nucleic Acid Research Department, Genetic Engineering and Biotechnology Research Institute, City of Scientific Research and Technological Applications, Alexandria, Egypt.
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Saeed M, Mohammad A, Singh P, Lal B, Suliman M, Alshahrani MY, Sharma M. Coconut waste valorization to produce biochar catalyst and its application in cellulose-degrading enzymes production via SSF. Int J Biol Macromol 2023; 240:124382. [PMID: 37030469 DOI: 10.1016/j.ijbiomac.2023.124382] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2023] [Revised: 03/26/2023] [Accepted: 04/05/2023] [Indexed: 04/08/2023]
Abstract
Solid waste management and waste valorization are key concerns and challenges around the globe. Solid wastes generated by food industries are found in a diverse variety, are key sources of enormously valuable compounds, and can be effectively transformed into useful products for broad industrial applications. Biomass-based catalysts, industrial enzymes, and biofuels are some of the very prominent and sustainable products that are developed using these solid wastes. The aims of the current study are therefore centered on the multiple valorizations of coconut waste (CWs) to develop biochar as a catalyst and its application in fungal enzyme production in solid-state fermentation (SSF). Biochar as a catalyst using CWs has been prepared via a calcination process lasting 1 h at 500 °C and characterized through X-ray diffraction, Fourier-transformed infrared spectroscopy, and scanning electron microscope techniques. The produced biochar has been implemented for boosting enzyme production through SSF. In addition, studies have been performed on enzyme production with varying time and temperature, and it is found that the maximum 92 IU/gds BGL enzyme could be produced at a 2.5 mg concentration of biochar-catalyst at 40 °C in 72 h.
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Srivastava RK, Nedungadi SV, Akhtar N, Sarangi PK, Subudhi S, Shadangi KP, Govarthanan M. Effective hydrolysis for waste plant biomass impacts sustainable fuel and reduced air pollution generation: A comprehensive review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 859:160260. [PMID: 36400296 DOI: 10.1016/j.scitotenv.2022.160260] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Revised: 11/06/2022] [Accepted: 11/14/2022] [Indexed: 06/16/2023]
Abstract
Among various natural biowastes availability in the environment, agricultural residues showed great impacts. It is due to huge availability and cheap carbon source, creating big challenges for their utility and systematic reduction. Objective of this review is to address the waste biomass availability and huge quantities issues and also put effort to minimize this nutrient load via biotransforming into value-added products. Different wastes (organic/inorganic) generation with their negative issues are due to numbers of developmental and social activities, reported. Currently, various efforts are found for these wastes minimization via generation of different types of value-added products (biogas, bioH2, alcoholic fuel, organic acids and others products) and these wastes in municipal cities are also reported with production of advanced biofuels as promising outcomes. For hydrolysis of complex organic resources including lignocellulosic biomasses, physicochemical, structural or compositional changes are needed that aid in conversion into sugar and organic compounds such as biofuels. So, efficient and effective pretreatment processes selection (physical, biological, chemical or combined one) is critical to achieve these hydrolysis goals and resultant cellulose or hemicellulose components can be accessible by biological catalysis. These can achieve final hydrolysis and fermentative or monomer sugars. And later, synthesis of fuels or value-added products during microbial fermentation or biotransformation processes can be achieved. This review discusses pretreatment techniques for improved hydrolysis for fermentative sugar with emphasis on reduced quantities of toxic compounds (furfural compound) in hydrolyzed biomasses. Minimum deterioration fuel economy also reported with production of different bioproducts including biofuels. Additionally, impacts of toxic products and gasses emission are also discussed with their minimization.
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Affiliation(s)
- Rajesh K Srivastava
- Department of Biotechnology, GITAM School of Technology, Gandhi Institute of Technology and Management (GITAM), Visakhapatnam 530045, India.
| | - Sruthy Vineed Nedungadi
- Department of Biotechnology, GITAM School of Technology, Gandhi Institute of Technology and Management (GITAM), Visakhapatnam 530045, India
| | - Nasim Akhtar
- Department of Biotechnology, GITAM School of Technology, Gandhi Institute of Technology and Management (GITAM), Visakhapatnam 530045, India
| | | | - Sanjukta Subudhi
- Advanced Biofuels program, The Energy and Resources Institute, Darbari Seth Block, Habitat Place, Lodhi Road, New Delhi 110 003, India
| | - Krushna Prasad Shadangi
- Department of Chemical Engineering, Veer Surendra Sai University of Technology, Burla, Sambalpur, Odisha, India
| | - Muthusamy Govarthanan
- Department of Environmental Engineering, Kyungpook National University, Daegu 41566, South Korea; Department of Biomaterials, Saveetha Dental College and Hospital, Saveetha Institute of Medical and Technical Sciences, Chennai 600 077, India
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12
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Qin Y, Qin B, Zhang J, Fu Y, Li Q, Luo F, Luo Y, He H. Purification and enzymatic properties of a new thermostable endoglucanase from Aspergillus oryzae HML366. INTERNATIONAL MICROBIOLOGY : THE OFFICIAL JOURNAL OF THE SPANISH SOCIETY FOR MICROBIOLOGY 2023:10.1007/s10123-023-00322-8. [PMID: 36705789 DOI: 10.1007/s10123-023-00322-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Revised: 11/02/2022] [Accepted: 01/04/2023] [Indexed: 01/28/2023]
Abstract
Aspergillus oryzae HML366 is a newly screened cellulase-producing strain. The endoglucanase HML ED1 from A. oryzae HML366 was quickly purified by a two-step method that combines ammonium sulfate precipitation and strong anion exchange column. SDS-PAGE electrophoresis indicated that the molecular weight of the enzyme was 68 kDa. The optimum temperature of the purified endoglucanase was 60 ℃ and the enzyme activity was stable below 70 ℃. The optimum pH was 6.5, and the enzyme activity was stable at pH between 4.5 and 9.0. The analysis indicated that additional Na+, K+, Ca2+, and Zn2+ reduced the catalytic ability of enzyme to the substrate, but Mn2+ enhanced its catalytic ability to the substrate.The Km and Vmax of the purified endoglucanase were 8.75 mg/mL and 60.24 μmol/min·mg, respectively. In this study, we report for the first time that A. oryzae HML366 can produce a heat-resistant and wide pH tolerant endoglucanase HML ED1, which has potential industrial application value in bioethanol, paper, food, textile, detergent, and pharmaceutical industries.
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Affiliation(s)
- Yongling Qin
- College of Chemistry and Biological Engineering, Hechi University, Yizhou, 546300, China. .,Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, Yizhou, 546300, China. .,Application and Research Center of Agricultural Biotechnology, Hechi University, Yizhou, 546300, China.
| | - Baoshan Qin
- College of Chemistry and Biological Engineering, Hechi University, Yizhou, 546300, China.,Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, Yizhou, 546300, China.,Application and Research Center of Agricultural Biotechnology, Hechi University, Yizhou, 546300, China
| | - Jian Zhang
- Guangxi Medical College, Nanning, 530023, China
| | - Yue Fu
- College of Chemistry and Biological Engineering, Hechi University, Yizhou, 546300, China.,Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, Yizhou, 546300, China.,Application and Research Center of Agricultural Biotechnology, Hechi University, Yizhou, 546300, China
| | - Qiqian Li
- College of Chemistry and Biological Engineering, Hechi University, Yizhou, 546300, China.,Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, Yizhou, 546300, China.,Application and Research Center of Agricultural Biotechnology, Hechi University, Yizhou, 546300, China
| | - Fengfeng Luo
- College of Chemistry and Biological Engineering, Hechi University, Yizhou, 546300, China.,Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, Yizhou, 546300, China.,Application and Research Center of Agricultural Biotechnology, Hechi University, Yizhou, 546300, China
| | - Yanmei Luo
- College of Chemistry and Biological Engineering, Hechi University, Yizhou, 546300, China
| | - Haiyan He
- College of Chemistry and Biological Engineering, Hechi University, Yizhou, 546300, China. .,Guangxi Colleges Universities Key Laboratory of Exploitation and Utilization of Microbial and Botanical Resources, Yizhou, 546300, China. .,Application and Research Center of Agricultural Biotechnology, Hechi University, Yizhou, 546300, China.
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13
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Santos ADS, Pereira GM, Mazotto de Almeida AM, Santos RRD, Terzi SDC, Pacheco TF, Beatriz Vermelho A, Corrêa Cabral LM, Couri S, Damaso MCT. Production, concentration and partial characterization of an enzymatic extract produced by an Aspergillus niger mutant in solid state fermentation. Prep Biochem Biotechnol 2022; 52:1109-1118. [PMID: 35175876 DOI: 10.1080/10826068.2022.2033989] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
An enzymatic extract from Aspergillus niger 3T5B8 was produced by Solid State Fermentation (SSF) in aerated columns, using wheat bran as substrate. A combination of extracts produced using three different process conditions varying temperature, pH and aeration formed the final extract (Mixture). The Mixture was concentrated by an ultrafiltration process that partially purified and provided an efficient recovery of the enzymatic activities of xylanase (88.89%), polygalacturonase (89.3%), β-glucosidase (93.15%), protease (98.68%) and carboxymethylcellulase (CMCase) (98.93%). SDS-PAGE analysis showed 15 visible protein bands in the crude and concentrated Mixture with molecular weights ranging from 15.1 to 104.6 kDa. Thin layer chromatography confirmed the effective action of β-glucosidase and xylanase hydrolysis activities over cellobiose and xylan, respectively. A central composite design (CCD) with two variables and four replicates at the center points was used to determine the optimal temperature and pH for CMCase and β-glucosidase. The optimal temperature was 78.9 °C and pH 3.8 for CMCase and 52.8 °C and pH 4.8 for β-glucosidase, respectively.
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Affiliation(s)
- Alex da Silva Santos
- Departamento de Ciência e Tecnologia de Alimentos, Universidade Federal Rural do Rio de Janeiro, Seropédica, Brazil.,Embrapa Agroindústria de Alimentos, Rio de Janeiro, Brazil
| | - Gabriela Moysés Pereira
- Instituto de Pesquisas de Produtos Naturais, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil
| | | | - Regiane Ribeiro Dos Santos
- Departamento de Ciência e Tecnologia de Alimentos, Universidade Federal Rural do Rio de Janeiro, Seropédica, Brazil.,Embrapa Agroindústria de Alimentos, Rio de Janeiro, Brazil
| | | | | | - Alane Beatriz Vermelho
- Instituto de Microbiologia Prof Paulo de Góes, BIOINOVAR, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil
| | | | - Sonia Couri
- Embrapa Agroindústria de Alimentos, Rio de Janeiro, Brazil
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Biochemical Characterization of Thermostable Carboxymethyl Cellulase and β-Glucosidase from Aspergillus fumigatus JCM 10253. Appl Biochem Biotechnol 2022; 194:2503-2527. [PMID: 35138555 DOI: 10.1007/s12010-022-03839-2] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/28/2022] [Indexed: 11/02/2022]
Abstract
Second-generation biofuel production has emerged as a prominent sustainable and alternative energy. The biochemical properties of cellulolytic enzymes are imperative for cellulosic biomass conversion into fermentable sugars. In the present study, thermostable CMCase and β-glucosidase were purified and characterized from Aspergillus fumigatus JCM 10253. The enzymes were purified through 80% ammonium sulfate precipitation, followed by dialysis and DEAE-cellulose ion-exchange chromatography. The molecular masses of the purified CMCase and β-glucosidase were estimated to be 125 kDa and 90 kDa, respectively. The CMCase and β-glucosidase demonstrated optimum activities at pH 6.0 and 5.0, respectively. Their respective maximum temperatures were 50 and 60 °C. The cellulase activities were stimulated by 10 mM concentration of Ca2+, Ni2+, Fe2+, Mg2+, Cu2+, Mn2+, Zn2+, and Pb2+ ions. The CMCase activity was enhanced by surfactant Triton X-100 but marginally influenced by most inhibitors. The β-glucosidase retained its activity in the presence of organic solvents (30%) isoamyl alcohol, heptane, toluene, and ethyl acetate, while CMCase was retained with acetone during a prolonged incubation of 168 h. The Km and Vmax values of the two cellulases were studied. The properties of high thermostability and good tolerance against organic solvents could signify its potential use in biofuel production and other value-added products.
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Characterization of Cellulase from Geotrichum candidum Strain Gad1 Approaching Bioethanol Production. ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING 2022. [DOI: 10.1007/s13369-021-06391-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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16
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Scapini T, Dalastra C, Camargo AF, Kubeneck S, Modkovski TA, Júnior SLA, Treichel H. Seawater-based biorefineries: A strategy to reduce the water footprint in the conversion of lignocellulosic biomass. BIORESOURCE TECHNOLOGY 2022; 344:126325. [PMID: 34785329 DOI: 10.1016/j.biortech.2021.126325] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 11/07/2021] [Accepted: 11/09/2021] [Indexed: 06/13/2023]
Abstract
Biorefineries are an essential step towards implementing a circular economy in the long term. They are based on renewable raw materials and must be designed holistically, recovering building blocks from being converted into several products. Lignocellulosic biomass is considered a critical pillar for a biologically based economy and a high value-added feedstock. The separation of the structural complexity that makes up the biomass allows the development of different product flows. Chemical, physical, and biological processes are evaluated for fractionation, hydrolysis, and fermentation processes in biorefineries; however, the volume of freshwater used affects water safety and increases the economic costs. Non-potable-resources-based technologies for biomass bioconversion are essential for biorefineries to become environmentally and economically sustainable systems. Studies are being carried out to substitute freshwater with seawater to reduce the water footprint. Accordingly, this review addresses a comprehensive discussion about seawater-based biorefineries focusing on lignocellulosic biomass conversion in biofuel and value-added products.
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Affiliation(s)
- Thamarys Scapini
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil; Bioprocess Engineering and Biotechnology Department, Federal University of Paraná, Curitiba, PR, Brazil
| | - Caroline Dalastra
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil
| | - Aline Frumi Camargo
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil; Department of Biological Science, Graduate Program in Biotechnology and Bioscience, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | - Simone Kubeneck
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil
| | | | - Sérgio Luiz Alves Júnior
- Laboratory of Biochemistry and Genetics, Federal University of Fronteira Sul, Chapecó, SC, Brazil
| | - Helen Treichel
- Laboratory of Microbiology and Bioprocess (LAMIBI), Federal University of Fronteira Sul, Erechim, RS, Brazil; Department of Biological Science, Graduate Program in Biotechnology and Bioscience, Federal University of Santa Catarina, Florianópolis, SC, Brazil.
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Sanjaya RE, Putri KDA, Kurniati A, Rohman A, Puspaningsih NNT. In silico characterization of the GH5-cellulase family from uncultured microorganisms: physicochemical and structural studies. J Genet Eng Biotechnol 2021; 19:143. [PMID: 34591195 PMCID: PMC8484414 DOI: 10.1186/s43141-021-00236-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2021] [Accepted: 08/29/2021] [Indexed: 11/10/2022]
Abstract
BACKGROUND Hydrolysis of cellulose-based biomass by cellulases produce fermented sugar for making biofuels, such as bioethanol. Cellulases hydrolyze the β-1,4-glycosidic linkage of cellulose and can be obtained from cultured and uncultured microorganisms. Uncultured microorganisms are a source for exploring novel cellulase genes through the metagenomic approach. Metagenomics concerns the extraction, cloning, and analysis of the entire genetic complement of a habitat without cultivating microbes. The glycoside hydrolase 5 family (GH5) is a cellulase family, as the largest group of glycoside hydrolases. Numerous variants of GH5-cellulase family have been identified through the metagenomic approach, including CelGH5 in this study. University-CoE-Research Center for Biomolecule Engineering, Universitas Airlangga successfully isolated CelGH5 from waste decomposition of oil palm empty fruit bunches (OPEFB) soil by metagenomics approach. The properties and structural characteristics of GH5-cellulases from uncultured microorganisms can be studied using computational tools and software. RESULTS The GH5-cellulase family from uncultured microorganisms was characterized using standard computational-based tools. The amino acid sequences and 3D-protein structures were retrieved from the GenBank Database and Protein Data Bank. The physicochemical analysis revealed the sequence length was roughly 332-751 amino acids, with the molecular weight range around 37-83 kDa, dominantly negative charges with pI values below 7. Alanine was the most abundant amino acid making up the GH5-cellulase family and the percentage of hydrophobic amino acids was more than hydrophilic. Interestingly, ten endopeptidases with the highest average number of cleavage sites were found. Another uniqueness demonstrated that there was also a difference in stability between in silico and wet lab. The II values indicated CelGH5 and ACA61162.1 as unstable enzymes, while the wet lab showed they were stable at broad pH range. The program of SOPMA, PDBsum, ProSA, and SAVES provided the secondary and tertiary structure analysis. The predominant secondary structure was the random coil, and tertiary structure has fulfilled the structure quality of QMEAN4, ERRAT, Ramachandran plot, and Z score. CONCLUSION This study can afford the new insights about the physicochemical and structural properties of the GH5-cellulase family from uncultured microorganisms. Furthermore, in silico analysis could be valuable in selecting a highly efficient cellulases for enhanced enzyme production.
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Affiliation(s)
- Rahmat Eko Sanjaya
- Mathematics and Natural Science Study Program, Faculty of Science and Technology, Kampus C Universitas Airlangga, Mulyorejo, Surabaya, East Java, 60115, Indonesia
- University-CoE-Research Centre for Bio-Molecule Engineering, 2nd Floor ITD Building, Kampus C Universitas Airlangga, Mulyorejo, Surabaya, East Java, 60115, Indonesia
- Chemistry Education Study Program, Faculty of Teacher Training and Education, Universitas Lambung Mangkurat, Jl. Brigjend. H. Hasan Basry, Banjarmasin, Kalimantan, 70123, Indonesia
| | - Kartika Dwi Asni Putri
- University-CoE-Research Centre for Bio-Molecule Engineering, 2nd Floor ITD Building, Kampus C Universitas Airlangga, Mulyorejo, Surabaya, East Java, 60115, Indonesia
| | - Anita Kurniati
- Mathematics and Natural Science Study Program, Faculty of Science and Technology, Kampus C Universitas Airlangga, Mulyorejo, Surabaya, East Java, 60115, Indonesia
- University-CoE-Research Centre for Bio-Molecule Engineering, 2nd Floor ITD Building, Kampus C Universitas Airlangga, Mulyorejo, Surabaya, East Java, 60115, Indonesia
- Department of Health, Faculty of Vocational Studies, Kampus B Universitas Airlangga, Surabaya, East Java, 60286, Indonesia
| | - Ali Rohman
- University-CoE-Research Centre for Bio-Molecule Engineering, 2nd Floor ITD Building, Kampus C Universitas Airlangga, Mulyorejo, Surabaya, East Java, 60115, Indonesia
- Department of Chemistry, Faculty of Science and Technology, Kampus C Universitas Airlangga, Mulyorejo, Surabaya, East Java, 60115, Indonesia
| | - Ni Nyoman Tri Puspaningsih
- University-CoE-Research Centre for Bio-Molecule Engineering, 2nd Floor ITD Building, Kampus C Universitas Airlangga, Mulyorejo, Surabaya, East Java, 60115, Indonesia.
- Department of Chemistry, Faculty of Science and Technology, Kampus C Universitas Airlangga, Mulyorejo, Surabaya, East Java, 60115, Indonesia.
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18
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Ejaz U, Sohail M, Ghanemi A. Cellulases: From Bioactivity to a Variety of Industrial Applications. Biomimetics (Basel) 2021; 6:44. [PMID: 34287227 PMCID: PMC8293267 DOI: 10.3390/biomimetics6030044] [Citation(s) in RCA: 61] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Revised: 06/20/2021] [Accepted: 06/30/2021] [Indexed: 11/16/2022] Open
Abstract
Utilization of microbial enzymes has been widely reported for centuries, but the commercial use of enzymes has been recently adopted. Particularly, cellulases have been utilized in various commercial sectors including agriculture, brewing, laundry, pulp and paper and textile industry. Cellulases of microbial origin have shown their potential application in various commercial sectors including textile, pulp and paper, laundry, brewing, agriculture and biofuel. Cellulases have diversified applications in the food industry, food service, food supply and its preservation. Indeed, cellulases can tenderize fruits, clarify the fruit juices, reduce roughage in dough, hydrolyze the roasted coffee, extract tea polyphenols and essential oils from olives and can increase aroma and taste in food items. However, their role in food industries has by and large remained neglected. The use of immobilized cellulases has further expanded their application in fruit and vegetable processing as it potentiates the catalytic power and reduces the cost of process. Technological and scientific developments will further expand their potential usage in the food industry.
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Affiliation(s)
- Uroosa Ejaz
- Department of Microbiology, University of Karachi, Karachi 75270, Pakistan;
- Department of Biosciences, Shaheed Zulfikar Ali Bhutto Institute of Science and Technology (SZABIST), Karachi 75600, Pakistan
| | - Muhammad Sohail
- Department of Microbiology, University of Karachi, Karachi 75270, Pakistan;
| | - Abdelaziz Ghanemi
- Department of Molecular Medicine, Faculty of Medicine, Laval University, Quebec, QC G1V 0A6, Canada
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Zhao B, Al Rasheed H, Ali I, Hu S. Efficient enzymatic saccharification of alkaline and ionic liquid-pretreated bamboo by highly active extremozymes produced by the co-culture of two halophilic fungi. BIORESOURCE TECHNOLOGY 2021; 319:124115. [PMID: 32949831 DOI: 10.1016/j.biortech.2020.124115] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2020] [Revised: 09/07/2020] [Accepted: 09/08/2020] [Indexed: 06/11/2023]
Abstract
Herein, we studied two strains of halophilic fungi (Aspergillus flavus and Aspergillus penicillioides) as potential potent sources of hydrolases under solid-state fermentation conditions. We found that the co-culture of these two fungal species was associated with maximal CMCase, FPase, xylanase, and β-xylosidase activity under optimized fermentation conditions. These enzymes functioned optimally at pH values from 9.0 to 10.0, at temperatures from 50 °C to 60 °C, and in the presence of 15-20% NaCl. These enzymes were also stable in metal salt solutions and the presence of ionic liquids. Reducing sugar yields following the cellulase-hemicellulase co-treatment of untreated, alkaline-pretreated, and ionic liquid-pretreated bamboo were higher than those associated with separate cellulase and hemicellulase treatments, thus confirming the synergistic activity of cellulase-hemicellulase co-treatment in the context of bamboo saccharification. These results indicate that these two fungi are promising hydrolase producers that can facilitate the bioconversion of bamboo biomass.
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Affiliation(s)
- Bo Zhao
- School of Life Science and Engineering, Bamboo Research Institute, Southwest University of Science and Technology, Mianyang 621010, China
| | - Haroon Al Rasheed
- School of Life Science and Engineering, Bamboo Research Institute, Southwest University of Science and Technology, Mianyang 621010, China
| | - Imran Ali
- School of Life Science and Engineering, Bamboo Research Institute, Southwest University of Science and Technology, Mianyang 621010, China; Institute of Biochemistry, University of Balochistan, Quetta 87300, Pakistan
| | - Shanglian Hu
- School of Life Science and Engineering, Bamboo Research Institute, Southwest University of Science and Technology, Mianyang 621010, China.
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Halophilic Fungal Communities: Current Research and Future Challenges. Fungal Biol 2021. [DOI: 10.1007/978-3-030-60659-6_9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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21
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Jagannath S, Konappa N, Lokesh A, Dasegowda T, Udayashankar AC, Chowdappa S, Cheluviah M, Satapute P, Jogaiah S. Bioactive compounds guided diversity of endophytic fungi from Baliospermum montanum and their potential extracellular enzymes. Anal Biochem 2020; 614:114024. [PMID: 33245903 DOI: 10.1016/j.ab.2020.114024] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2020] [Revised: 11/16/2020] [Accepted: 11/19/2020] [Indexed: 12/12/2022]
Abstract
Baliospermum montanum (Willd.) Muell. Arg, a medicinal plant distributed throughout India from Kashmir to peninsular-Indian region is extensively used to treat jaundice, asthma, and constipation. In the current study, 203 endophytic fungi representing twenty-nine species were isolated from tissues of B. montanum. The colonization and isolation rate of endophytes were higher in stem followed by seed, root, leaf and flower. The phytochemical analysis revealed 70% endophytic isolates showed alkaloids and flavonoids, 13% were positive for phenols, saponins and terpenoids. Further, these endophytes produced remarkable extracellular enzymes such as amylase, cellulase, phosphates, protease and lipase. The most promisive three endophytic fungi were identified by ITS region and secreted metabolites were identified by gas chromatography-mass spectrometry (GC-MS/MS). The GC-MS profile detected twenty-five bioactive compounds from ethyl acetate extracts. Among endophytic fungi, Trichoderma reesei isolated from flower exhibited nine bioactive compounds namely, 2-Cyclopentenone, 2-(4-chloroanilino)-4-piperidino, Oxime-methoxy-Phenyl, Methanamine N-hydroxy-N-methyl, Strychane, Cyclotetrasiloxane, Octamethyl and 1-Acetyl-20a-hydroxy-16-methylene. The endophyte, Aspergillus brasiliensis isolated from root and Fusarium oxysporum isolated from seed produced nine and seven bioactive compounds, respectively. Overall, a significant contribution of bioactive compounds was noticed from the diverse endophytic fungi associated with B. montanum and could be explored for development of novel drug with commercial values.
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Affiliation(s)
- Shubha Jagannath
- Department of Botany, Molecular Biology Division, Jnana Bharathi Campus, Bangalore University, Bengaluru, 560 056, Karnataka, India
| | - Narasimhamurthy Konappa
- Department of Studies in Biotechnology, University of Mysore, Manasagangotri, Mysur, 570 006, Karnataka, India
| | - Arpitha Lokesh
- Department of Botany, Molecular Biology Division, Jnana Bharathi Campus, Bangalore University, Bengaluru, 560 056, Karnataka, India
| | - Tejaswini Dasegowda
- Department of Botany, Molecular Biology Division, Jnana Bharathi Campus, Bangalore University, Bengaluru, 560 056, Karnataka, India
| | - Arakere C Udayashankar
- Department of Studies in Biotechnology, University of Mysore, Manasagangotri, Mysur, 570 006, Karnataka, India
| | - Srinivas Chowdappa
- Fungal Metabolites Research Laboratory, Department of Microbiology and Biotechnology, Jnana Bharathi Campus, Bangalore University, Bangalore, 560 056, Karnataka, India
| | - Maya Cheluviah
- Department of Botany, Molecular Biology Division, Jnana Bharathi Campus, Bangalore University, Bengaluru, 560 056, Karnataka, India.
| | - Praveen Satapute
- Laboratory of Plant Healthcare and Diagnostics, PG Department of Biotechnology and Microbiology, Karnataka University, Dharwad, 580 003, Karnataka, India
| | - Sudisha Jogaiah
- Laboratory of Plant Healthcare and Diagnostics, PG Department of Biotechnology and Microbiology, Karnataka University, Dharwad, 580 003, Karnataka, India.
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Rattanasuk S, Songsaeng A, Sriwarom T. <i>Pseudomonas stutzeri </i> CM1, Novel Thermotolerant Cellulase- Producing Bacteria Isolated from Forest Soil. Pak J Biol Sci 2020; 23:1345-1350. [PMID: 32981269 DOI: 10.3923/pjbs.2020.1345.1350] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
BACKGROUND AND OBJECTIVE Cellulase is an important enzyme that useful for agricultural residue hydrolysis such as plant stover, molasse, rice straw. Thermotolerant cellulases are required to apply in textile, food, detergent, biofuels and pharmaceutical applications. This research aimed to isolate the thermotolerant cellulase-producing bacteria from forest soil and to determine cellulase activity from isolated bacteria. MATERIALS AND METHODS Soil samples were collected from the Roi Et Rajabhat University forest. One gram of soil sample was mixed with Luria-Bertani (LB) broth medium and incubated at 37°C with shaking at 150 rpm for 24 h. The cultured broth was streaked on LB agar plate and incubated at 37°C for 24 h. Cellulase-producing bacteria were isolated using Carboxymethylcellulose (CMC) agar plate. Four bacterial isolates which presented a clear zone on CMC agar plate after flooded with iodine solution, named CM1, CM2, CM3 and CM4. Cellulase activity of 4 isolated bacteria was determined against various pH (pH 4-8) and temperature (50-100°C). RESULTS The results indicated that CM1 isolate showed the highest cellulase activity at 0.074 unit mL-1 at 80°C and pH5. All isolates were identified using 16S rRNA gene sequencing. The results indicated that CM1, CM3 and CM4 were identified as Pseudomonas stutzeri. while isolate CM2 was Bacillus subtilis. CONCLUSION This is the first report presenting the thermotolerant cellulase produced by Pseudomonas stutzeri. The thermotolerant cellulase produced from Pseudomonas stutzeri in this study will be useful in many industrial processes using cellulase at high temperatures.
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Namnuch N, Thammasittirong A, Thammasittirong SNR. Lignocellulose hydrolytic enzymes production by Aspergillus flavus KUB2 using submerged fermentation of sugarcane bagasse waste. Mycology 2020; 12:119-127. [PMID: 34026303 PMCID: PMC8128202 DOI: 10.1080/21501203.2020.1806938] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
Abstract
Lignocellulosic wastes, rice straw, sugarcane bagasse, rice bran and sawdust, and pure commercial carboxymethyl cellulose (CMC) and xylan were used as substrates to cultivate cellulolytic fungus, Aspergillus flavus KUB2, in submerged fermentation at 30°C. Of all the substrates, sugarcane bagasse was a good source for the production of cellulolytic and also hemicellulolytic enzymes. The maximum activities of endoglucanase (CMCase), total cellulase (FPase) and xylanase using sugarcane bagasse as substrate were 8%, 75% and 165%, respectively, higher than those of the commercial substrates. The time course determination of enzyme production revealed that the highest CMCase (1.27 U/ml), FPase (0.72 U/ml) and xylanase (376.81 U/ml) activities were observed at 14 days of fermentation. Fourier transform infrared (FTIR) spectroscopy and scanning electron microscopy (SEM) analyses confirmed the efficient structural alteration of sugarcane bagasse caused by enzymatic actions during A. flavus KUB2 cultivation. Based on the results of the hydrolytic enzyme activities, FTIR and SEM, A. flavus KUB2 is suggested as an efficient hydrolytic enzymes producer and an effective lignocellulose degrader, while sugarcane bagasse can be applied as a low-cost carbon source for the economical production of lignocellulose hydrolytic enzymes by A. flavus KUB2.
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Affiliation(s)
- Nattida Namnuch
- Department of Microbiology, Faculty of Liberal Arts and Science, Kasetsart University, Nakhon Pathom, Thailand
| | - Anon Thammasittirong
- Department of Microbiology, Faculty of Liberal Arts and Science, Kasetsart University, Nakhon Pathom, Thailand.,Microbial Biotechnology Unit, Faculty of Liberal Arts and Science, Kasetsart University, Nakhon Pathom, Thailand
| | - Sutticha Na-Ranong Thammasittirong
- Department of Microbiology, Faculty of Liberal Arts and Science, Kasetsart University, Nakhon Pathom, Thailand.,Microbial Biotechnology Unit, Faculty of Liberal Arts and Science, Kasetsart University, Nakhon Pathom, Thailand
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