Diversity in Micromineral Distribution Within the Body of Ornamental Fish Species

Searching and identifying pigmentation genes from Neocaridina denticulate sinensis via comparison of transcriptome in different color strains

Aquaria species are characterized by their amazing colors and patterns. Research on the breeding molecular genetics of ornamental shrimps is surprisingly limited. We conducted a transcriptome analysis to investigate the expression of encoding genes in the integument of the strains Neocaridina denticulate sinensis. After assembled and filtered, 19,992 unigenes were annotated by aligning with public functional databases (NR, Swiss-Prot, KEGG, COG). 14,915 unigenes with significantly different expressions were found by comparing three strains integument transcriptomes. Ribosomal protein genes, ABC transporter families, calmodulin, carotenoid proteins and crustacyanin may play roles in the cytological process of pigment migration and chromatophore maintenance. Numerous color genes associated with multiple pathways including melanin, ommochrome and pteridines pathways were identified. The expression patterns of 25 candidate genes were analysis by qPCR in red, yellow, transparent and glass strains. The qPCR results in red, yellow and transparent were consistent with the level of RPKM values in the transcriptomes. The above results will advance our knowledge of integument color varieties in N. denticulate sinensis and help the genetic selection of crustaceans with consumer-favored colors. Furthermore, it also provides some candidate pigmentation genes to investigate the correlation between coloration and sympatric speciation in crustaceans.

Distribution and Accumulation of Trace Elements in Organs of Juvenile Fishes from a Freshwater System (Paraná River, South America)

The concentrations of As, Cd, Cr, Cu, Fe, Mn, Ni, Pb, and Zn (TE) in four juvenile fishes (Acestrorhynchus pantaneiro, Salminus brasiliensis, Brycon orbignyanus, and Megaleporinus obtusidens) and associated sediment water from the Lower Paraná River were measured. For muscle, gills, and liver fishes, the TE accumulation in the muscle, gills, and liver was evaluated. The TE concentration was measured by quadrupolar inductively coupled plasma mass spectrometry (Q-ICP-MS). Cadmium (0.25 ± 0.07 μg L^-1), Cu (3.00 ± 1.44 μg L^-1), Fe (612 ± 69 μg L^-1), and Pb (1.92 ± 1.20 μg L^-1) in water and As (4.1-6.9 μg g^-1), Cr (20.1-31.4 μg g^-1), Cu (10.7-19.2 μg g^-1), Mn (351.3-482.2 μg g^-1), and Ni (24.5 ± 10.9 μg g^-1) in sediments exceeded the guide values for the conservation of aquatic life. In general, muscle of omnivorous species (B. orbignyanus and M. obtusidens) showed higher values of elements than those of carnivorous species (A. pantaneiro and S. brasiliensis). However, TE concentrations varied with fish species and organs. Independently of the examined species, the highest concentrations of Cr and Pb were in the muscle and gills, respectively. Cadmium, Cu, and Fe concentrations were higher in the liver than in gills and muscle in all four fish species. These results were consistent with the tissue selectivity index analyzed. For the four species, major essential elements showed the highest accumulation. However, the accumulation of toxic elements in omnivorous fish was higher than in carnivorous fish. The individual pollution load index indicated that sediment was very polluted with As and Pb, but based on the combined ecological indexes, low elemental sediment pollution in the Espinillo Lake was revealed.

Impact of species and their edible parts on the macronutrient and mineral composition of fish from the same aquatic environment, the Gilgel Gibe Reservoir, Ethiopia

Fish is an important source of easily digestible animal protein and other essential nutrients. It plays a pivotal role in food security and poverty alleviation in developing countries. However, the nations of the global South consume a limited number of fish species. This study aimed to evaluate the macronutrient and mineral composition of Whole fish (Labeobarbus intermedius, Garra quadrimaculata) and fillet (Oreochromis niloticus, Labeobarbus intermedius). A total of 64 fish samples were collected from Gilgel Gibe reservoir, Ethiopia, and analysed for its macronutrient and mineral composition. The proximate composition and mineral contents of fillets and whole body samples were determined. The whole fish showed a much higher fat and ash percentage than the fillets (p < 0.05). The fillets contained a much higher protein concentration than the whole fish (p < 0.05). The higher Ca:P ratios in whole fish compared to fillet in our study confirm the importance for a healthy human skeletal development, especially in diets where Ca is typically lacking. Whole Garra appeared to be containing important trace elements such as zinc and iron, a feature that was not found to the same extent in the whole Labeobarbus. These differences may find its origin in the feeding pattern of these fish species in the reservoir. The advantage of benthic species such as Garra to enrich the human diet with essential minerals may, however, coincide with the accumulation of toxic heavy metals as a potential result of soil erosion.

The Impact of Lake Ecosystems on Mineral Concentrations in Tissues of Nile Tilapia (Oreochromis niloticus L.)

This study evaluates the differences in mineral and toxic trace element concentrations of Nile tilapia (Oreochromis niloticus) tissues from three aquatic ecosystems in Ethiopia-Lake Ziway, Lake Langano, and Gilgel Gibe reservoir-with a focus on edible (fillet) and discarded (digestive tract, gills, skin, and liver) parts. A total of sixty (n = 60) Nile tilapia samples were collected, comprising twenty (n = 20) fish from each lake, and analyzed by inductively coupled plasma mass spectrometry. All elements varied markedly among tissues and between the lakes. Some differences in element concentrations were attributed to differences in nutrient load in the ecosystems and the function of the tissues. For instance, the calcium concentrations in skin and gill were distinctly higher in fish from calcium-rich Lake Langano. The d iscarded parts were richer in essential trace elements, showing an opportunity to promote their use in human nutrition to increase the intake of important minerals. However, the accumulation of elements toxic to humans, such as aluminum, should be monitored and, in particular, controlled when rearing these fish in aquaculture.

Identification of Functional SSR Markers in Freshwater Ornamental Shrimps Neocaridina denticulata Using Transcriptome Sequencing

The amazing colors and patterns are fascinating characteristics in all of the aquarium species. However, genetic and breeding molecular investigations of ornamental shrimps are rather limited. Here, we present the first transcriptomic analysis and application of microsatellites based on the chromatophore-encoded genes of Neocaridina denticulata to assist freshwater ornamental shrimp germplasm enhancement and its extensive applications. A total of 65,402 unigenes were annotated, and 4706 differentially expressed genes were screened and identified between super red shrimp and chocolate shrimp strains. Several gene ratios were examined to put in perspective possible genetic markers for the different strains of normal pigmentation development, including flotillin-2-like, keratin, the G protein-coupled receptor Mth2-like, annexin A7, and unconventional myosin-IXb-like. Five simple sequence repeat markers were effective for colored shrimps and were used to develop a marker-assisted selection platform for systematic breeding management program to maintain genetic diversity of the species. These markers could also be used to assist the identification of pure strains and increase the genetic stability of ornamental shrimp color phenotypes. Consequently, our results of microsatellite marker development are valuable for assisting shrimp genetic and selection breeding studies on freshwater ornamental shrimp and related crystal shrimp species.