1
|
Zafar F, Saif K, Andreescu D, Andreescu S, Hayat A. A Target Responsive Metal Organic Framework Derived Bimetallic Apta-Switch for Reagentless Molecular Recognition. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2025; 41:507-517. [PMID: 39743662 DOI: 10.1021/acs.langmuir.4c03752] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2025]
Abstract
By integrating iron-cobalt squarate bimetallic metal-organic framework (Fe-Co-SqBMoF) based smart material (SM) with functional DNA (fDNA), we designed a target responsive fDNA@Fe-Co-SqBMoF bioelectrode that exhibits recognition induced switchable response to serve as a reagentless single step electrochemical apta-switch (REA). The construct takes advantage of fDNA ability to bind and concentrate target on the receptor interface, while Fe-Co-SqBMoF@SM multifeatures to serve as an immobilization matrix and a signal generating electrochemical switch. Fe-Co-SqBMoF was introduced to prepare a redox active pencil graphite electrode (PGE), while fDNA (aptamer) was decorated on the receptor PGE to impart specificity and selectivity. The Fe-Co-SqBMoF synthesis was characterized through X-ray diffraction (XRD), Fourier transform infrared (FTIR) spectroscopy, micro-Raman spectroscopy, dynamic light scattering (DLS), and UV-visible (UV-vis) analysis, while each step of fDNA decoration and bioelectrode fabrication was characterized via field emission scanning electron microscopy (FE-SEM), static water contact angle measurements, cyclic voltammetry (CV), and electrochemical impedance spectroscopy (EIS). To explore the potential application of the fDNA@Fe-Co-SqBMoF bioelectrode, we designed a REA for detection of aflatoxin B1 (AFB1) which permitted the detection of AFB1 in the linear range 0.7-1000 pg/mL with an LOD of 0.54 pg. The practical applicability of an fDNA@Fe-Co-SqBMoF based REA was demonstrated in milk and water samples.
Collapse
Affiliation(s)
- Farhan Zafar
- Interdisciplinary Research Center in Biomedical Materials (IRCBM), COMSATS University Islamabad (CUI), Lahore Campus, Lahore 54000, Pakistan
| | - Khansa Saif
- Interdisciplinary Research Center in Biomedical Materials (IRCBM), COMSATS University Islamabad (CUI), Lahore Campus, Lahore 54000, Pakistan
| | - Daniel Andreescu
- Department of Chemistry and Biomolecular Science, Clarkson University, 8 Clarkson Avenue, Potsdam, New York 13699-5810, United States
| | - Silvana Andreescu
- Department of Environmental Health Sciences, Robert Stempel College of Public Health, Florida International University (FIU), 11200 SW eighth Street, AHC-5, Miami, Florida 33199, United States
- Department of Chemistry and Biomolecular Science, Clarkson University, 8 Clarkson Avenue, Potsdam, New York 13699-5810, United States
| | - Akhtar Hayat
- Interdisciplinary Research Center in Biomedical Materials (IRCBM), COMSATS University Islamabad (CUI), Lahore Campus, Lahore 54000, Pakistan
| |
Collapse
|
2
|
Zafar A, Iqbal MA, Iram G, Shoukat US, Jamil F, Saleem M, Yousif M, Abidin ZU, Asad M. Advances in organocatalyzed synthesis of organic compounds. RSC Adv 2024; 14:20365-20389. [PMID: 38919284 PMCID: PMC11197984 DOI: 10.1039/d4ra03046j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2024] [Accepted: 06/17/2024] [Indexed: 06/27/2024] Open
Abstract
The recent advancements in utilizing organocatalysts for the synthesis of organic compounds have been described in this review by focusing on their simplicity, effectiveness, reproducibility, and high selectivity which lead to excellent product yields. The organocatalytic methods for various derivatives, such as indoles, pyrazolones, anthrone-functionalized benzylic amines, maleimide, polyester, phthalimides, dihydropyrimidin, heteroaryls, N-aryl benzimidazoles, stilbenoids, quinazolines, quinolines, and oxazolidinones have been specifically focused. The review provides more understanding by delving into potential reaction mechanisms. We anticipate that this collection of data and findings on successful synthesis of diverse compound derivatives will serve as valuable resources and stimulating current and future research efforts in organocatalysis and industrial chemistry.
Collapse
Affiliation(s)
- Ayesha Zafar
- Department of Chemistry, University of Agriculture Faisalabad Faisalabad-38000 Pakistan
| | - Muhammad Adnan Iqbal
- Department of Chemistry, University of Agriculture Faisalabad Faisalabad-38000 Pakistan
- Organometallic and Coordination Chemistry Laboratory, Department of Chemistry, University of Agriculture Faisalabad Faisalabad-38000 Pakistan
| | - Ghazala Iram
- Department of Chemistry, University of Agriculture Faisalabad Faisalabad-38000 Pakistan
| | - Umar Sohail Shoukat
- Department of Chemistry, University of Agriculture Faisalabad Faisalabad-38000 Pakistan
| | - Faisal Jamil
- Department of Chemistry, University of Agriculture Faisalabad Faisalabad-38000 Pakistan
| | - Muhammad Saleem
- Department of Basic and Applied Chemistry, Faculty of Sciences and Technology, University of Central Punjab Lahore Pakistan
| | - Muhammad Yousif
- Department of Chemistry, University of Agriculture Faisalabad Faisalabad-38000 Pakistan
| | - Zain Ul Abidin
- Department of Chemistry, University of Agriculture Faisalabad Faisalabad-38000 Pakistan
| | - Mohammad Asad
- Center of Excellence for Advanced Materials Research (CEAMR), King Abdulaziz University P.O. Box 80203 Jeddah 21589 Saudi Arabia
| |
Collapse
|
3
|
Chiriac AP, Ghilan A, Croitoriu A, Serban A, Bercea M, Stoleru E, Nita LE, Doroftei F, Stoica I, Bargan A, Rusu AG, Chiriac VM. Study on cellulose nanofibrils/copolymacrolactone based nano-composites with hydrophobic behaviour, self-healing ability and antioxidant activity. Int J Biol Macromol 2024; 262:130034. [PMID: 38340942 DOI: 10.1016/j.ijbiomac.2024.130034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Revised: 01/29/2024] [Accepted: 02/05/2024] [Indexed: 02/12/2024]
Abstract
The multiple uses of cellulose nanofibrils (CNFs) originate from their availability from renewable resources, and are due to their physico-chemical properties, biodegradability and biocompatibility. At the same time, reducing sensitivity to humidity, increasing interfacial adhesion and hydrophobic modification of the CNF surface to diversify applications and improve operation, are current targets pursued. This study focuses on the preparation of a novel gel structure using cellulose nanofibrils (CNFs) and poly(ethylene brassylate-co-squaric acid) (PEBSA50/50), a bio-based copolymacrolactone. The primary goal is to achieve the gel with reduced sensitivity to humidity and enhanced hydrophobic behaviour. The new system was characterized in comparison to its constituent components using various techniques, such as Fourier transform infrared spectroscopy, thermal analysis, X-ray diffraction, and NIR - chemical imaging. Rheological tests demonstrated the formation of the CNF_PEBSA50/50 gel as a result of physical interactions between the two polymeric partners and revealed self-healing abilities for the prepared gels. Determination of the contact angle, surface free energy, as well as dynamic measurements of the vapour sorption of the CNF_PEBSA50/50 system, confirmed the achievement of the study's aim. Furthermore, the CNF_PEBSA50/50 network was utilized to encapsulate citric acid, resulting in the creation of a new bioactive composite with both antioxidant and antimicrobial activity.
Collapse
Affiliation(s)
- Aurica P Chiriac
- Petru Poni Institute of Macromolecular Chemistry, 41 A Grigore Ghica Voda Alley, 700487 Iasi, Romania.
| | - Alina Ghilan
- Petru Poni Institute of Macromolecular Chemistry, 41 A Grigore Ghica Voda Alley, 700487 Iasi, Romania
| | - Alexandra Croitoriu
- Petru Poni Institute of Macromolecular Chemistry, 41 A Grigore Ghica Voda Alley, 700487 Iasi, Romania
| | - Alexandru Serban
- Petru Poni Institute of Macromolecular Chemistry, 41 A Grigore Ghica Voda Alley, 700487 Iasi, Romania
| | - Maria Bercea
- Petru Poni Institute of Macromolecular Chemistry, 41 A Grigore Ghica Voda Alley, 700487 Iasi, Romania
| | - Elena Stoleru
- Petru Poni Institute of Macromolecular Chemistry, 41 A Grigore Ghica Voda Alley, 700487 Iasi, Romania
| | - Loredana Elena Nita
- Petru Poni Institute of Macromolecular Chemistry, 41 A Grigore Ghica Voda Alley, 700487 Iasi, Romania
| | - Florica Doroftei
- Petru Poni Institute of Macromolecular Chemistry, 41 A Grigore Ghica Voda Alley, 700487 Iasi, Romania
| | - Iuliana Stoica
- Petru Poni Institute of Macromolecular Chemistry, 41 A Grigore Ghica Voda Alley, 700487 Iasi, Romania
| | - Alexandra Bargan
- Petru Poni Institute of Macromolecular Chemistry, 41 A Grigore Ghica Voda Alley, 700487 Iasi, Romania
| | - Alina Gabriela Rusu
- Petru Poni Institute of Macromolecular Chemistry, 41 A Grigore Ghica Voda Alley, 700487 Iasi, Romania
| | - Vlad Mihai Chiriac
- Petru Poni Institute of Macromolecular Chemistry, 41 A Grigore Ghica Voda Alley, 700487 Iasi, Romania
| |
Collapse
|
4
|
Pal S, Das D, Bhunia S. p-Toluenesulfonic acid-promoted organic transformations for the generation of molecular complexity. Org Biomol Chem 2024; 22:1527-1579. [PMID: 38275082 DOI: 10.1039/d3ob01766d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2024]
Abstract
Since the beginning of this century, p-toluenesulfonic acid (p-TSA) catalysed organic transformations have been an active area of research for developing efficient synthetic methodologies. Often, catalysis using p-TSA is associated with many advantages, such as operational simplicity, high selectivity, excellent yields, and ease of product isolation, which make organic synthesis convenient and versatile. Notably, p-TSA is a non-toxic, commercially available, inexpensive solid organic compound that is soluble in water, alcohols, and other polar organic solvents. p-TSA is a strong acid compared to many protic or mineral acids and its high acidity helps activate different organic functional groups. p-TSA-promoted conversions are fast, have a high atom and pot economy, and feature a multiple bond-forming index. Therefore, the utilization of p-TSA enables the synthesis of many important structural scaffolds without any hazardous metals, making it desirable in numerous applications of sustainable and green chemistry. Recently, this emerging area of research has become one of the pillars of synthetic organic chemistry to synthesise biologically relevant, complex carbocycles and heterocycles. This study provides a comprehensive summary of methods, applications, and mechanistic insights into p-TSA-catalysed organic transformations, covering the literature reports that have appeared since 2012.
Collapse
Affiliation(s)
- Sanchari Pal
- Department of Chemistry, Triveni Devi Bhalotia College, Raniganj, India.
| | - Debjit Das
- Department of Chemistry, Triveni Devi Bhalotia College, Raniganj, India.
| | - Sabyasachi Bhunia
- Department of Chemistry, Central University of Jharkhand, Ranchi, Jharkhand, India.
| |
Collapse
|
5
|
2-(1H-Imidazol-2-yl)-2,3-dihydro-1H-perimidine. MOLBANK 2023. [DOI: 10.3390/m1587] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2023] Open
Abstract
The novel compound 2-(1H-imidazol-2-yl)-2,3-dihydro-1H-perimidine was obtained in very good yield via a known eco-friendly protocol. The product was isolated in pure form as a solvate by simple filtration from the crude mixture. Its structure was assigned by 1D and 2D NMR experiments and was confirmed by high resolution MS and single crystal XRD. The temperature of methanol release was determined by DSC and the energy of the process theoretically estimated.
Collapse
|
6
|
Zhang J, Xu L, Xiao W, Chen Y, Dong Z, Xu J, Lei C. Ring-opening polymerization of ε-caprolactone with recyclable and reusable squaric acid organocatalyst. Eur Polym J 2021. [DOI: 10.1016/j.eurpolymj.2021.110643] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
|
7
|
Harry NA, Ujwaldev SM, Aneeja T, Anilkumar G. A Comprehensive Overview of Perimidines: Synthesis, Chemical Transformations, and Applications. CURR ORG CHEM 2021. [DOI: 10.2174/1385272824999201124141506] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Perimidines are nitrogen-containing heterocyclic scaffolds with a wide range of
biological and material properties. Several synthetic transformations on perimidines afford
fused heterocycles. This review focuses on every aspect of perimidines, including different
synthetic procedures, reactions and applications, and covers the literature published up to the
year 2020, using more than 170 references.
Collapse
Affiliation(s)
- Nissy Ann Harry
- School of Chemical Sciences, Mahatma Gandhi University, Priyadarsini Hills P.O. Kottayam, Kerala-686560, India
| | - Sankuviruthiyil M. Ujwaldev
- School of Chemical Sciences, Mahatma Gandhi University, Priyadarsini Hills P.O. Kottayam, Kerala-686560, India
| | - Thaipparambil Aneeja
- School of Chemical Sciences, Mahatma Gandhi University, Priyadarsini Hills P.O. Kottayam, Kerala-686560, India
| | - Gopinathan Anilkumar
- School of Chemical Sciences, Mahatma Gandhi University, Priyadarsini Hills P.O. Kottayam, Kerala-686560, India
| |
Collapse
|
8
|
Sahiba N, Sethiya A, Soni J, Agarwal S. Metal Free Sulfonic Acid Functionalized Carbon Catalyst for Green and Mechanochemical Synthesis of Perimidines. ChemistrySelect 2020. [DOI: 10.1002/slct.202003308] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Nusrat Sahiba
- Synthetic Organic Chemistry Laboratory Department of Chemistry, MLSU Udaipur(Raj.) 313001 India
| | - Ayushi Sethiya
- Synthetic Organic Chemistry Laboratory Department of Chemistry, MLSU Udaipur(Raj.) 313001 India
| | - Jay Soni
- Synthetic Organic Chemistry Laboratory Department of Chemistry, MLSU Udaipur(Raj.) 313001 India
| | - Shikha Agarwal
- Synthetic Organic Chemistry Laboratory Department of Chemistry, MLSU Udaipur(Raj.) 313001 India
| |
Collapse
|
9
|
Farghaly TA, Al-Hussain SA, Muhammad ZA, Abdallah MA, Zaki MEA. Synthesis and Reactions of Perimidines and Their Fused Systems. CURR ORG CHEM 2020. [DOI: 10.2174/1385272824999200622113807] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Perimidines are peri-naphtho-fused derivatives of pyrimidine. They are of particular
interest as they are a rare example of an azine in which the lone pair of electrons of
pyrrole-like nitrogen participates in the π-system of the molecule. Perimidine is an interesting
class of heterocyclic compounds. Various synthetic analogs of perimidines have been
prepared and evaluated for many pharmacological activities in different models with desired
findings. They exhibit biological activities as antitumor, antiulcer, antimicrobial, and antifungal
agents. This review is an attempt to organize the synthesis and chemical reactions of
perimidine analogs reported to date systematically since 1955. It should be noted that this
review is the first one that includes the preparation and reactions of the perimidine ring.
Collapse
Affiliation(s)
- Thoraya A. Farghaly
- Department of Chemistry, Faculty of Science, Cairo University, Giza, 12613, Egypt
| | - Sami A. Al-Hussain
- Department of Chemistry, Faculty of Science, Al-Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh 11623, Saudi Arabia
| | - Zeinab A. Muhammad
- Department of Organic Chemistry, National Organization for Drug Control and Research (NODCAR), Giza 12311, Egypt
| | - Magda A. Abdallah
- Department of Chemistry, Faculty of Science, Cairo University, Giza, 12613, Egypt
| | - Magdi E. A. Zaki
- Department of Chemistry, Faculty of Science, Al-Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh 11623, Saudi Arabia
| |
Collapse
|
10
|
Harry NA, Shilpa T, Ujwaldev SM, Anilkumar G. A novel eco‐friendly on‐water protocol for the synthesis of 2,2‐disubstituted 2,
3‐dihydro‐1
H
‐perimidines. J Heterocycl Chem 2020. [DOI: 10.1002/jhet.4146] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Affiliation(s)
- Nissy Ann Harry
- School of Chemical Sciences Mahatma Gandhi University Priyadarsini Hills, Kottayam Kerala India
| | - Thomas Shilpa
- School of Chemical Sciences Mahatma Gandhi University Priyadarsini Hills, Kottayam Kerala India
| | | | - Gopinathan Anilkumar
- School of Chemical Sciences Mahatma Gandhi University Priyadarsini Hills, Kottayam Kerala India
- Advanced Molecular Materials Research Centre (AMMRC) Mahatma Gandhi University Priyadarsini Hills, Kottayam Kerala India
- Institute for Integrated programmes and Research in Basic Sciences (IIRBS) Mahatma Gandhi University Priyadarsini Hills, Kottayam Kerala India
| |
Collapse
|
11
|
Sahiba N, Agarwal S. Recent Advances in the Synthesis of Perimidines and their Applications. Top Curr Chem (Cham) 2020; 378:44. [PMID: 32776212 PMCID: PMC7415412 DOI: 10.1007/s41061-020-00307-5] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2020] [Accepted: 07/25/2020] [Indexed: 01/11/2023]
Abstract
Perimidines are versatile scaffolds and a fascinating class of N-heterocycles that have evolved significantly in recent years due to their immense applications in life sciences, medical sciences, and industrial chemistry. Their ability of molecular interaction with different proteins, complex formation with metals, and distinct behavior in various ranges of light makes them more appealing and challenging for future scientists. Various novel technologies have been developed for the selective synthesis of perimidines and their conjugated derivatives. These methods extend to the preparation of different bioactive and industrially applicable molecules. This review aims to present the most recent advancements in perimidine synthesis under varied conditions like MW radiation, ultrasound, and grinding using different catalysts such as ionic liquids, acid, metal, and nanocatalyst and also under green environments like catalyst and solvent-free synthesis. The applications of perimidine derivatives in drug discovery, polymer chemistry, photo sensors, dye industries, and catalytic activity in organic synthesis are discussed in this survey. This article is expected to be a systematic, authoritative, and critical review on the chemistry of perimidines that compiles most of the state-of-art innovation in this area.
Collapse
Affiliation(s)
- Nusrat Sahiba
- Synthetic Organic Chemistry Laboratory, Department of Chemistry, MLSU, Udaipur, 313001 India
| | - Shikha Agarwal
- Synthetic Organic Chemistry Laboratory, Department of Chemistry, MLSU, Udaipur, 313001 India
| |
Collapse
|