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Foli LP, Hespanhol MC, Cruz KAML, Pasquini C. Miniaturized Near-Infrared spectrophotometers in forensic analytical science - a critical review. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2024; 315:124297. [PMID: 38640625 DOI: 10.1016/j.saa.2024.124297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2024] [Revised: 04/13/2024] [Accepted: 04/14/2024] [Indexed: 04/21/2024]
Abstract
The advent of miniaturized NIR instruments, also known as compact, portable, or handheld, is revolutionizing how technology can be employed in forensics. In-field analysis becomes feasible and affordable with these new instruments, and a series of methods has been developed to provide the police and official agents with objective, easy-to-use, tailored, and accurate qualitative and quantitative forensic results. This work discusses the main aspects and presents a comprehensive and critical review of compact NIR spectrophotometers associated with analytical protocols to produce information on forensic matters.
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Affiliation(s)
- Letícia P Foli
- Grupo de Análise e Educação para a Sustentabilidade, Departamento de Química, Centro de Ciências Exatas e Tecnológicas, Universidade Federal de Viçosa, Av. P. H. Rolfs, s/n, Viçosa, MG, 36570-900, Brazil
| | - Maria C Hespanhol
- Grupo de Análise e Educação para a Sustentabilidade, Departamento de Química, Centro de Ciências Exatas e Tecnológicas, Universidade Federal de Viçosa, Av. P. H. Rolfs, s/n, Viçosa, MG, 36570-900, Brazil
| | - Kaíque A M L Cruz
- Grupo de Análise e Educação para a Sustentabilidade, Departamento de Química, Centro de Ciências Exatas e Tecnológicas, Universidade Federal de Viçosa, Av. P. H. Rolfs, s/n, Viçosa, MG, 36570-900, Brazil
| | - Celio Pasquini
- Instituto de Química, Universidade Estadual de Campinas (UNICAMP), Rua Monteiro Lobato, 290, Campinas, SP 13083-862, Brazil.
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2
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Giussani B, Gorla G, Riu J. Analytical Chemistry Strategies in the Use of Miniaturised NIR Instruments: An Overview. Crit Rev Anal Chem 2024; 54:11-43. [PMID: 35286178 DOI: 10.1080/10408347.2022.2047607] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
Miniaturized NIR instruments have been increasingly used in the last years, and they have become useful tools for many applications on a broad variety of samples. This review focuses on miniaturized NIR instruments from an analytical point of view, to give an overview of the analytical strategies used in order to help the reader to set up their own analytical methods, from the sampling to the data analysis. It highlights the uses of these instruments, providing a critical discussion including current and future trends.
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Affiliation(s)
- Barbara Giussani
- Dipartimento di Scienza e Alta Tecnologia, Università degli Studi dell'Insubria, Como, Italy
| | - Giulia Gorla
- Dipartimento di Scienza e Alta Tecnologia, Università degli Studi dell'Insubria, Como, Italy
| | - Jordi Riu
- Department of Analytical Chemistry and Organic Chemistry, Universitat Rovira i Virgili, Tarragona, Spain
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3
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Ozen B, Cavdaroglu C, Tokatli F. Trends in authentication of edible oils using vibrational spectroscopic techniques. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2024. [PMID: 38899503 DOI: 10.1039/d4ay00562g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/21/2024]
Abstract
The authentication of edible oils has become increasingly important for ensuring product quality, safety, and compliance with regulatory standards. Some prevalent authenticity issues found in edible oils include blending expensive oils with cheaper substitutes or lower-grade oils, incorrect labeling regarding the oil's source or type, and falsely stating the oil's origin. Vibrational spectroscopy techniques, such as infrared (IR) and Raman spectroscopy, have emerged as effective tools for rapidly and non-destructively analyzing edible oils. This review paper offers a comprehensive overview of recent advancements in using vibrational spectroscopy for authenticating edible oils. The fundamental principles underlying vibrational spectroscopy are introduced and chemometric approaches that enhance the accuracy and reliability of edible oil authentication are summarized. Recent research trends highlighted in the review include authenticating newly introduced oils, identifying oils based on their specific origins, adopting handheld/portable spectrometers and hyperspectral imaging, and integrating modern data handling techniques into the use of vibrational spectroscopic techniques for edible oil authentication. Overall, this review provides insights into the current state-of-the-art techniques and prospects for utilizing vibrational spectroscopy in the authentication of edible oils, thereby facilitating quality control and consumer protection in the food industry.
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Affiliation(s)
- Banu Ozen
- Izmir Institute of Technology, Department of Food Engineering, Urla, Izmir, Turkiye.
| | - Cagri Cavdaroglu
- Izmir Institute of Technology, Department of Food Engineering, Urla, Izmir, Turkiye.
| | - Figen Tokatli
- Izmir Institute of Technology, Department of Food Engineering, Urla, Izmir, Turkiye.
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4
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Ali H, Muthudoss P, Chauhan C, Kaliappan I, Kumar D, Paudel A, Ramasamy G. Machine Learning-Enabled NIR Spectroscopy. Part 3: Hyperparameter by Design (HyD) Based ANN-MLP Optimization, Model Generalizability, and Model Transferability. AAPS PharmSciTech 2023; 24:254. [PMID: 38062329 DOI: 10.1208/s12249-023-02697-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Accepted: 11/01/2023] [Indexed: 12/18/2023] Open
Abstract
Data variations, library changes, and poorly tuned hyperparameters can cause failures in data-driven modelling. In such scenarios, model drift, a gradual shift in model performance, can lead to inaccurate predictions. Monitoring and mitigating drift are vital to maintain model effectiveness. USFDA and ICH regulate pharmaceutical variation with scientific risk-based approaches. In this study, the hyperparameter optimization for the Artificial Neural Network Multilayer Perceptron (ANN-MLP) was investigated using open-source data. The design of experiments (DoE) approach in combination with target drift prediction and statistical process control (SPC) was employed to achieve this objective. First, pre-screening and optimization DoEs were conducted on lab-scale data, serving as internal validation data, to identify the design space and control space. The regression performance metrics were carefully monitored to ensure the right set of hyperparameters was selected, optimizing the modelling time and storage requirements. Before extending the analysis to external validation data, a drift analysis on the target variable was performed. This aimed to determine if the external data fell within the studied range or required retraining of the model. Although a drift was observed, the external data remained well within the range of the internal validation data. Subsequently, trend analysis and process monitoring for the mean absolute error of the active content were conducted. The combined use of DoE, drift analysis, and SPC enabled trend analysis, ensuring that both current and external validation data met acceptance criteria. Out-of-specification and process control limits were determined, providing valuable insights into the model's performance and overall reliability. This comprehensive approach allowed for robust hyperparameter optimization and effective management of model lifecycle, crucial in achieving accurate and dependable predictions in various real-world applications.
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Affiliation(s)
- Hussain Ali
- Christ (Deemed to Be University), Bangalore, 560029, Karnataka, India
| | - Prakash Muthudoss
- A2Z4.0 Research and Analytics Private Limited, Chennai, 600062, Tamilnadu, India
- NuAxon Bioscience Inc., Bloomington, Indiana, 47401-6301, USA
- School of Pharmaceutical Sciences, Vels Institute of Science, Technology & Advanced Studies (VISTAS), Velan Nagar P.V. Vaithiyalingam Road Pallavaram 600117, Chennai, Tamilnadu, India
| | | | - Ilango Kaliappan
- School of Pharmacy, Hindustan Institute of Technology and Science (HITS), Padur, 603 103, Chennai, Tamilnadu, India
| | - Dinesh Kumar
- Department of Pharmaceutical Engineering & Technology, IIT (BHU), Varanasi, 221011, Uttar Pradesh, India
| | - Amrit Paudel
- Research Center Pharmaceutical Engineering GmbH (RCPE), Inffeldgasse 13, 8010, Graz, Austria.
- Graz University of Technology, Institute of Process and Particle Engineering, Inffeldgasse 13/3, 8010, Graz, Austria.
| | - Gobi Ramasamy
- Christ (Deemed to Be University), Bangalore, 560029, Karnataka, India.
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Rodionova O, Pomerantsev A. Multi-block DD-SIMCA as a high-level data fusion tool. Anal Chim Acta 2023; 1265:341328. [PMID: 37230573 DOI: 10.1016/j.aca.2023.341328] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 04/20/2023] [Accepted: 05/05/2023] [Indexed: 05/27/2023]
Abstract
Multi-block classification method based on the Data Driven Soft Independent Modeling of Class Analogy (DD-SIMCA) is presented. A high-level data fusion approach is used for the joint analysis of data collected with the help of different analytical instruments. The proposed fusion technique is very simple and straightforward. It uses a Cumulative Analytical Signal which is a combination of outcomes of the individual classification models. Any number of blocks can be combined. Although the high-level fusion eventually leads to a rather complex model, the analysis of partial distances makes it possible to establish a meaningful relationship between the classification results and the influence of individual samples and specific tools. Two real world examples are used to demonstrate the applicability of the multi-block algorithm and the consistency of the multi-block method with its predecessor, a conventional DD-SIMCA.
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Affiliation(s)
- O Rodionova
- Federal Research Center for Chemical Physics RAS, Moscow, Russia.
| | - A Pomerantsev
- Federal Research Center for Chemical Physics RAS, Moscow, Russia
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Ali H, Muthudoss P, Ramalingam M, Kanakaraj L, Paudel A, Ramasamy G. Machine Learning-Enabled NIR Spectroscopy. Part 2: Workflow for Selecting a Subset of Samples from Publicly Accessible Data. AAPS PharmSciTech 2023; 24:34. [PMID: 36627410 DOI: 10.1208/s12249-022-02493-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2022] [Accepted: 12/14/2022] [Indexed: 01/11/2023] Open
Abstract
An increasingly large dataset of pharmaceutics disciplines is frequently challenging to comprehend. Since machine learning needs high-quality data sets, the open-source dataset can be a place to start. This work presents a systematic method to choose representative subsamples from the existing research, along with an extensive set of quality measures and a visualization strategy. The preceding article (Muthudoss et al.. in AAPS PharmSciTech 23, 2022) describes a workflow for leveraging near infrared (NIR) spectroscopy to obtain reliable and robust data on pharmaceutical samples. This study describes the systematic and structured procedure for selecting subsamples from the historical data. We offer a wide range of in-depth quality measures, diagnostic tools, and visualization techniques. A real-world, well-researched NIR dataset was employed to demonstrate this approach. This open-source tablet dataset ( http://www.models.life.ku.dk/Tablets ) consists of different doses in milligrams, different shapes, and sizes of dosage forms, slots in tablets, three different manufacturing scales (lab, pilot, production), coating differences (coated vs uncoated), etc. This sample is appropriate; that is, the model was developed on one scale (in this research, the lab scale), and it can be great to investigate how well the top models are transferable when tested on new data like pilot-scale or production (full) scale. A literature review indicated that the PLS regression models outperform artificial neural network-multilayer perceptron (ANN-MLP). This work demonstrates the selection of appropriate hyperparameters and their impact on ANN-MLP model performance. The hyperparameter tuning approaches and performance with available references are discussed for the data under investigation. Model extension from lab-scale to pilot-scale/production scale is demonstrated. HIGHLIGHTS: • We present a comprehensive quality metrics and visualization strategy in selecting subsamples from the existing studies • A comprehensive assessment and workflow are demonstrated using historical real-world near-infrared (NIR) data sets • Selection of appropriate hyperparameters and their impact on artificial neural network-multilayer perceptron (ANN-MLP) model performance • The choice of hyperparameter tuning approaches and performance with available references are discussed for the data under investigation • Model extension from lab-scale to pilot-scale successfully demonstrated.
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Affiliation(s)
- Hussain Ali
- Christ (Deemed to Be University), Bangalore, 560029, Karnataka, India
| | - Prakash Muthudoss
- A2Z4.0 Research and Analytics Private Limited, Chennai, 600062, Tamilnadu, India
| | - Manikandan Ramalingam
- Chettinad School of Pharmaceutical Sciences, Chettinad Academy of Research and Education, Chettinad Health City, 603103, Chennai, Tamilnadu, India
| | - Lakshmi Kanakaraj
- Chettinad School of Pharmaceutical Sciences, Chettinad Academy of Research and Education, Chettinad Health City, 603103, Chennai, Tamilnadu, India
| | - Amrit Paudel
- Research Center Pharmaceutical Engineering GmbH (RCPE), Inffeldgasse 13, 8010, Graz, Austria. .,Institute of Process and Particle Engineering, Graz University of Technology, Inffeldgasse 13/3, 8010, Graz, Austria.
| | - Gobi Ramasamy
- Christ (Deemed to Be University), Bangalore, 560029, Karnataka, India.
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Pastore TC, Braga LR, da C. Kunze DC, Soares LF, Pastore F, de O. Moreira AC, dos Anjos PV, Lara CS, Coradin VT, W. B. Braga J. A green and direct method for authentication of rosewood essential oil by handheld near infrared spectrometer and one-class classification modeling. Microchem J 2022. [DOI: 10.1016/j.microc.2022.107916] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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8
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Muthudoss P, Tewari I, Chi RLR, Young KJ, Ann EYC, Hui DNS, Khai OY, Allada R, Rao M, Shahane S, Das S, Babla I, Mhetre S, Paudel A. Machine Learning-Enabled NIR Spectroscopy in Assessing Powder Blend Uniformity: Clear-Up Disparities and Biases Induced by Physical Artefacts. AAPS PharmSciTech 2022; 23:277. [PMID: 36229571 DOI: 10.1208/s12249-022-02403-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Accepted: 08/22/2022] [Indexed: 11/30/2022] Open
Abstract
NIR spectroscopy is a non-destructive characterization tool for the blend uniformity (BU) assessment. However, NIR spectra of powder blends often contain overlapping physical and chemical information of the samples. Deconvoluting the information related to chemical properties from that associated with the physical effects is one of the major objectives of this work. We achieve this aim in two ways. Firstly, we identified various sources of variability that might affect the BU results. Secondly, we leverage the machine learning-based sophisticated data analytics processes. To accomplish the aforementioned objectives, calibration samples of amlodipine as an active pharmaceutical ingredient (API) with the concentrations ranging between 67 and 133% w/w (dose ~ 3.6% w/w), in powder blends containing excipients, were prepared using a gravimetric approach and assessed using NIR spectroscopic analysis, followed by HPLC measurements. The bias in NIR results was investigated by employing data quality metrics (DQM) and bias-variance decomposition (BVD). To overcome the bias, the clustered regression (non-parametric and linear) was applied. We assessed the model's performance by employing the hold-out and k-fold internal cross-validation (CV). NIR-based blend homogeneity with low mean absolute error and an interval estimates of 0.674 (mean) ± 0.218 (standard deviation) w/w was established. Additionally, bootstrapping-based CV was leveraged as part of the NIR method lifecycle management that demonstrated the mean absolute error (MAE) of BU ± 3.5% w/w and BU ± 1.5% w/w for model generalizability and model transferability, respectively. A workflow integrating machine learning to NIR spectral analysis was established and implemented. Impact of various data learning approaches on NIR spectral data.
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Affiliation(s)
- Prakash Muthudoss
- Oncogen Pharma (Malaysia), Sdn Bhd, 3, Jalan Jururancang U1/21, Hicom-glenmarie Industrial Park, 40150, Shah Alam, Selangor, Malaysia.,A2Z4.0 Research and Analytics Private Limited, Old No:810, New No:62, CTH Road, Behind Lenskart, Thirumullaivoil, Chennai, Tamilnadu, India
| | - Ishan Tewari
- The Machine Learning Company, Beed, Maharashtra, India.,Institute of Technology, Nirma University, Ahmedabad, Gujarat, India
| | - Rayce Lim Rui Chi
- Oncogen Pharma (Malaysia), Sdn Bhd, 3, Jalan Jururancang U1/21, Hicom-glenmarie Industrial Park, 40150, Shah Alam, Selangor, Malaysia
| | - Kwok Jia Young
- Oncogen Pharma (Malaysia), Sdn Bhd, 3, Jalan Jururancang U1/21, Hicom-glenmarie Industrial Park, 40150, Shah Alam, Selangor, Malaysia
| | - Eddy Yii Chung Ann
- Oncogen Pharma (Malaysia), Sdn Bhd, 3, Jalan Jururancang U1/21, Hicom-glenmarie Industrial Park, 40150, Shah Alam, Selangor, Malaysia
| | - Doreen Ng Sean Hui
- Oncogen Pharma (Malaysia), Sdn Bhd, 3, Jalan Jururancang U1/21, Hicom-glenmarie Industrial Park, 40150, Shah Alam, Selangor, Malaysia
| | - Ooi Yee Khai
- Perkin Elmer Sdn Bhd, L2, 2-01, Wisma Academy, Jalan 19/1, Seksyen 19, 46300, Petaling Jaya, Selangor, Malaysia
| | - Ravikiran Allada
- Novugen Pharma (Malaysia), Sdn Bhd, 3, Jalan Jururancang U1/21, Hicom-glenmarie Industrial Park, 40150, Shah Alam, Selangor, Malaysia
| | - Manohar Rao
- PerkinElmer (India) Private Limited, Vayudooth Chambers, 12th floor, Trinity Circle, Mahatma Gandhi Rd, Bengaluru, Karnataka, 560001, India
| | | | - Samir Das
- Oncogen Pharma (Malaysia), Sdn Bhd, 3, Jalan Jururancang U1/21, Hicom-glenmarie Industrial Park, 40150, Shah Alam, Selangor, Malaysia
| | - Irfan Babla
- Oncogen Pharma (Malaysia), Sdn Bhd, 3, Jalan Jururancang U1/21, Hicom-glenmarie Industrial Park, 40150, Shah Alam, Selangor, Malaysia
| | - Sandeep Mhetre
- Oncogen Pharma (Malaysia), Sdn Bhd, 3, Jalan Jururancang U1/21, Hicom-glenmarie Industrial Park, 40150, Shah Alam, Selangor, Malaysia
| | - Amrit Paudel
- Research Center Pharmaceutical Engineering GmbH (RCPE), Inffeldgasse 13, 8010, Graz, Austria. .,Institute of Process and Particle Engineering, Graz University of Technology, Inffeldgasse 13/3, 8010, Graz, Austria.
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Strojnik L, Potočnik D, Jagodic Hudobivnik M, Mazej D, Japelj B, Škrk N, Marolt S, Heath D, Ogrinc N. Geographical identification of strawberries based on stable isotope ratio and multi-elemental analysis coupled with multivariate statistical analysis: A Slovenian case study. Food Chem 2022; 381:132204. [PMID: 35114619 DOI: 10.1016/j.foodchem.2022.132204] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Revised: 01/13/2022] [Accepted: 01/17/2022] [Indexed: 11/27/2022]
Abstract
The geographical classification and authentication of strawberries were attempted using discriminant and class-modelling methods applied to stable isotopes of light elements and elemental composition. The work involved creating a database of 92 authentic Slovenian strawberry samples and 32 imported samples. All samples were harvested between 2018 and 2020. A good geographical classification of Slovenian and non-Slovenian strawberries was obtained despite different production years using discriminant approaches. However, for verifying compliance with a given specification (geographical indications), a class-modelling approach was used to build an unbiased verification model. Class models generated by data-driven soft independent modelling of class analogy (DD-SIMCA) had high sensitivity (96% to 97%) and good specificity (81% to 91%) on a yearly basis, while a more generalised model combining total yearly data gave a lower specificity (63%). Of the 33 commercially available samples (test samples) with declared Slovenian origin, 39% were from outside of Slovenia.
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Affiliation(s)
- Lidija Strojnik
- Department of Environmental Sciences, Jožef Stefan Institute, Ljubljana 1000, Slovenia; Jožef Stefan International Postgraduate School, Ljubljana 1000, Slovenia.
| | - Doris Potočnik
- Department of Environmental Sciences, Jožef Stefan Institute, Ljubljana 1000, Slovenia; Jožef Stefan International Postgraduate School, Ljubljana 1000, Slovenia.
| | | | - Darja Mazej
- Department of Environmental Sciences, Jožef Stefan Institute, Ljubljana 1000, Slovenia.
| | | | - Nadja Škrk
- Administration for Food Safety, Veterinary Sector and Plant Protection, Ministry of Agriculture, Forestry and Food of the Republic of Slovenia, Ljubljana 1000, Slovenia.
| | - Suzana Marolt
- Administration for Food Safety, Veterinary Sector and Plant Protection, Ministry of Agriculture, Forestry and Food of the Republic of Slovenia, Ljubljana 1000, Slovenia.
| | - David Heath
- Department of Environmental Sciences, Jožef Stefan Institute, Ljubljana 1000, Slovenia.
| | - Nives Ogrinc
- Department of Environmental Sciences, Jožef Stefan Institute, Ljubljana 1000, Slovenia; Jožef Stefan International Postgraduate School, Ljubljana 1000, Slovenia.
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Belyakov MV, Kulikova MG, Gerts AA. Control of powdery contents and mass rates of the extract in the dry substance of barley malt by photoluminescent method. Int J Food Sci Technol 2022. [DOI: 10.1111/ijfs.15398] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
- Mikhail V. Belyakov
- Federal State Budgetary Scientific Institution Institution Federal Scientific Agroengineering Center VIM 1st Institutskiy proezd, 5 Moscow 109428 Russia
| | - Marina. G. Kulikova
- Branch of the Federal State Budgetary Educational Institution of Higher Education "National Research University" MPEI " in Smolensk 1, Energetichesky proezd Smolensk 214013 Russia
| | - Andrej. A. Gerts
- Branch of the Federal State Budgetary Educational Institution of Higher Education "National Research University" MPEI " in Smolensk 1, Energetichesky proezd Smolensk 214013 Russia
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