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Triastuti A, Haddad M, Barakat F, Mejia K, Rabouille G, Fabre N, Amasifuen C, Jargeat P, Vansteelandt M. Dynamics of Chemical Diversity during Co-Cultures: An Integrative Time-Scale Metabolomics Study of Fungal Endophytes Cophinforma mamane and Fusarium solani. Chem Biodivers 2021; 18:e2000672. [PMID: 33289281 DOI: 10.1002/cbdv.202000672] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2020] [Accepted: 12/07/2020] [Indexed: 11/07/2022]
Abstract
A rapid and efficient metabolomic study of Cophinforma mamane and Fusarium solani co-cultivation in time-series based analysis was developed to study metabolome variations during their fungal interactions. The fungal metabolomes were studied through the integration of four metabolomic tools: MS-DIAL, a chromatographic deconvolution of liquid-chromatography-mass spectrometry (LC/MS); MS-FINDER, a structure-elucidation program with a wide range metabolome database; GNPS, an effective method to organize MS/MS fragmentation spectra, and MetaboAnalyst, a comprehensive web application for metabolomic data analysis and interpretation. Co-cultures of C. mamane and F. solani induced different patterns of metabolite production over 10 days of incubation and induced production of five de novo compounds not occurring in monocultures. These results emphasize that co-culture in time-frame analysis is an interesting method to unravel hidden metabolome in the investigation of fungal chemodiversity.
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Affiliation(s)
- Asih Triastuti
- UMR 152 Pharma Dev, Université de Toulouse, IRD, UPS, 31400, Toulouse, France.,Department of Pharmacy, Universitas Islam Indonesia, Yogyakarta, 55584, Indonesia
| | - Mohamed Haddad
- UMR 152 Pharma Dev, Université de Toulouse, IRD, UPS, 31400, Toulouse, France
| | - Fatima Barakat
- UMR 152 Pharma Dev, Université de Toulouse, IRD, UPS, 31400, Toulouse, France
| | - Kember Mejia
- Instituto de Investigaciones de la Amazonía Peruana, Avenida Abelardo Quiñonez Km. 4.5, Iquitos, 1600, Peru
| | - Gabriel Rabouille
- UMR 152 Pharma Dev, Université de Toulouse, IRD, UPS, 31400, Toulouse, France
| | - Nicolas Fabre
- UMR 152 Pharma Dev, Université de Toulouse, IRD, UPS, 31400, Toulouse, France
| | - Carlos Amasifuen
- Facultad de Ingeniería Civil y Ambiental [FICIAM], Escuela de Ingeniería Ambiental, Universidad Nacional Toribio Rodríguez de Mendoza [UNTRM, Chachapoyas, 01001, Peru
| | - Patricia Jargeat
- Laboratoire Evolution et Diversité Biologique UMR 5174, Université de Toulouse, CNRS, IRD, UPS, 31062, Toulouse, France
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