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Zeng L, Li J, Lv M, Li Z, Yao L, Gao J, Wu Q, Wang Z, Yang X, Tang G, Qu G, Jiang G. Environmental Stability and Transmissibility of Enveloped Viruses at Varied Animate and Inanimate Interfaces. ENVIRONMENT & HEALTH (WASHINGTON, D.C.) 2023; 1:15-31. [PMID: 37552709 PMCID: PMC10255587 DOI: 10.1021/envhealth.3c00005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Revised: 04/11/2023] [Accepted: 04/13/2023] [Indexed: 08/10/2023]
Abstract
Enveloped viruses have been the leading causative agents of viral epidemics in the past decade, including the ongoing coronavirus disease 2019 outbreak. In epidemics caused by enveloped viruses, direct contact is a common route of infection, while indirect transmissions through the environment also contribute to the spread of the disease, although their significance remains controversial. Bridging the knowledge gap regarding the influence of interfacial interactions on the persistence of enveloped viruses in the environment reveals the transmission mechanisms when the virus undergoes mutations and prevents excessive disinfection during viral epidemics. Herein, from the perspective of the driving force, partition efficiency, and viral survivability at interfaces, we summarize the viral and environmental characteristics that affect the environmental transmission of viruses. We expect to provide insights for virus detection, environmental surveillance, and disinfection to limit the spread of severe acute respiratory syndrome coronavirus 2.
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Affiliation(s)
- Li Zeng
- State Key Laboratory of Environmental Chemistry and
Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese
Academy of Sciences, Beijing 100085, China
- University of Chinese Academy of
Sciences, Beijing 100049, China
| | - Junya Li
- College of Sciences, Northeastern
University, Shenyang 110819, China
| | - Meilin Lv
- College of Sciences, Northeastern
University, Shenyang 110819, China
| | - Zikang Li
- State Key Laboratory of Environmental Chemistry and
Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese
Academy of Sciences, Beijing 100085, China
- University of Chinese Academy of
Sciences, Beijing 100049, China
| | - Linlin Yao
- State Key Laboratory of Environmental Chemistry and
Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese
Academy of Sciences, Beijing 100085, China
- University of Chinese Academy of
Sciences, Beijing 100049, China
| | - Jie Gao
- State Key Laboratory of Environmental Chemistry and
Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese
Academy of Sciences, Beijing 100085, China
- School of Environment, Hangzhou Institute
for Advanced Study, UCAS, Hangzhou 310000, China
| | - Qi Wu
- State Key Laboratory of Environmental Chemistry and
Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese
Academy of Sciences, Beijing 100085, China
- School of Environment, Hangzhou Institute
for Advanced Study, UCAS, Hangzhou 310000, China
| | - Ziniu Wang
- State Key Laboratory of Environmental Chemistry and
Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese
Academy of Sciences, Beijing 100085, China
- University of Chinese Academy of
Sciences, Beijing 100049, China
| | - Xinyue Yang
- State Key Laboratory of Environmental Chemistry and
Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese
Academy of Sciences, Beijing 100085, China
- University of Chinese Academy of
Sciences, Beijing 100049, China
| | - Gang Tang
- State Key Laboratory of Environmental Chemistry and
Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese
Academy of Sciences, Beijing 100085, China
- University of Chinese Academy of
Sciences, Beijing 100049, China
| | - Guangbo Qu
- State Key Laboratory of Environmental Chemistry and
Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese
Academy of Sciences, Beijing 100085, China
- School of Environment, Hangzhou Institute
for Advanced Study, UCAS, Hangzhou 310000, China
- Institute of Environment and Health,
Jianghan University, Wuhan 430056,
China
- University of Chinese Academy of
Sciences, Beijing 100049, China
| | - Guibin Jiang
- State Key Laboratory of Environmental Chemistry and
Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese
Academy of Sciences, Beijing 100085, China
- School of Environment, Hangzhou Institute
for Advanced Study, UCAS, Hangzhou 310000, China
- University of Chinese Academy of
Sciences, Beijing 100049, China
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Boyd E, Coombe M, Prystajecky N, Caleta JM, Sekirov I, Tyson J, Himsworth C. Hands off the Mink! Using Environmental Sampling for SARS-CoV-2 Surveillance in American Mink. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2023; 20:1248. [PMID: 36674005 PMCID: PMC9858792 DOI: 10.3390/ijerph20021248] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Revised: 01/08/2023] [Accepted: 01/09/2023] [Indexed: 06/17/2023]
Abstract
Throughout the COVID-19 pandemic, numerous non-human species were shown to be susceptible to natural infection by SARS-CoV-2, including farmed American mink. Once infected, American mink can transfer the virus from mink to human and mink to mink, resulting in a high rate of viral mutation. Therefore, outbreak surveillance on American mink farms is imperative for both mink and human health. Historically, disease surveillance on mink farms has consisted of a combination of mortality and live animal sampling; however, these methodologies have significant limitations. This study compared PCR testing of both deceased and live animal samples to environmental samples on an active outbreak premise, to determine the utility of environmental sampling. Environmental sampling mirrored trends in both deceased and live animal sampling in terms of percent positivity and appeared more sensitive in some low-prevalence instances. PCR CT values of environmental samples were significantly different from live animal samples' CT values and were consistently high (mean CT = 36.2), likely indicating a low amount of viral RNA in the samples. There is compelling evidence in favour of environmental sampling for the purpose of disease surveillance, specifically as an early warning tool for SARS-CoV-2; however, further work is needed to ultimately determine whether environmental samples are viable sources for molecular epidemiology investigations.
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Affiliation(s)
- Ellen Boyd
- Ministry of Agriculture and Food, Government of British Columbia, Abbotsford, BC V3G 2M3, Canada
- School of Population and Public Health, University of British Columbia, Vancouver, BC V6T 1Z3, Canada
| | - Michelle Coombe
- Ministry of Agriculture and Food, Government of British Columbia, Abbotsford, BC V3G 2M3, Canada
- School of Population and Public Health, University of British Columbia, Vancouver, BC V6T 1Z3, Canada
| | - Natalie Prystajecky
- School of Population and Public Health, University of British Columbia, Vancouver, BC V6T 1Z3, Canada
- BC Centre for Disease Control, Vancouver, BC V5Z 4R4, Canada
| | | | - Inna Sekirov
- BC Centre for Disease Control, Vancouver, BC V5Z 4R4, Canada
| | - John Tyson
- BC Centre for Disease Control, Vancouver, BC V5Z 4R4, Canada
| | - Chelsea Himsworth
- Ministry of Agriculture and Food, Government of British Columbia, Abbotsford, BC V3G 2M3, Canada
- School of Population and Public Health, University of British Columbia, Vancouver, BC V6T 1Z3, Canada
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Kostoglou M, Petala M, Karapantsios T, Dovas C, Roilides E, Metallidis S, Papa A, Stylianidis E, Papadopoulos A, Papaioannou N. SARS-CoV-2 adsorption on suspended solids along a sewerage network: mathematical model formulation, sensitivity analysis, and parametric study. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:11304-11319. [PMID: 34542818 PMCID: PMC8450709 DOI: 10.1007/s11356-021-16528-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2021] [Accepted: 09/08/2021] [Indexed: 05/24/2023]
Abstract
Accounting for SARS-CoV-2 adsorption on solids suspended in wastewater is a necessary step towards the reliable estimation of virus shedding rate in a sewerage system, based on measurements performed at a terminal collection station, i.e., at the entrance of a wastewater treatment plant. This concept is extended herein to include several measurement stations across a city to enable the estimation of spatial distribution of virus shedding rate. This study presents a pioneer general model describing the most relevant physicochemical phenomena with a special effort to reduce the complicated algebra. This is performed both in the topology regime, introducing a discrete-continuous approach, and in the domain of independent variables, introducing a monodisperse moment method to reduce the dimensionality of the resulting population balance equations. The resulting simplified model consists of a large system of ordinary differential equations. A sensitivity analysis is performed with respect to some key parameters for a single pipe topology. Specific numerical techniques are employed for the integration of the model. Finally, a parametric case study for an indicative-yet realistic-sewerage piping system is performed to show how the model is applied to SARS-CoV-2 adsorption on wastewater solids in the presence of other competing species. This is the first model of this kind appearing in scientific literature and a first step towards setting up an inverse problem to assess the spatial distribution of virus shedding rate based on its concentration in wastewater.
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Affiliation(s)
- Margaritis Kostoglou
- Laboratory of Chemical and Environmental Technology, Department of Chemistry, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece
| | - Maria Petala
- Laboratory of Environmental Engineering & Planning, Department of Civil Engineering, Aristotle University of Thessaloniki, 54 124, Thessaloniki, Greece
| | - Thodoris Karapantsios
- Laboratory of Chemical and Environmental Technology, Department of Chemistry, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece.
| | - Chrysostomos Dovas
- Faculty of Veterinary Medicine, School of Health Sciences, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece
| | - Emmanuel Roilides
- Infectious Diseases Unit and 3rd Department of Pediatrics, Aristotle University School of Health Sciences, Hippokration Hospital, 54642, Thessaloniki, Greece
| | - Simeon Metallidis
- Department of Haematology, First Department of Internal Medicine, Faculty of Medicine, AHEPA General Hospital, Aristotle University of Thessaloniki, 54636, Thessaloniki, Greece
| | - Anna Papa
- Department of Microbiology, Medical School, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece
| | - Efstratios Stylianidis
- School of Spatial Planning and Development, Faculty of Engineering, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece
| | - Agis Papadopoulos
- EYATH S.A., Thessaloniki Water Supply and Sewerage Company S.A., 54636, Thessaloniki, Greece
| | - Nikolaos Papaioannou
- Faculty of Veterinary Medicine, School of Health Sciences, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece
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Wurtzer S, Waldman P, Ferrier-Rembert A, Frenois-Veyrat G, Mouchel JM, Boni M, Maday Y, Marechal V, Moulin L. Several forms of SARS-CoV-2 RNA can be detected in wastewaters: Implication for wastewater-based epidemiology and risk assessment. WATER RESEARCH 2021; 198:117183. [PMID: 33962244 DOI: 10.1101/2020.12.19.20248508] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2020] [Revised: 04/14/2021] [Accepted: 04/17/2021] [Indexed: 05/21/2023]
Abstract
The ongoing global pandemic of coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has been a public health emergency of international concern. Although SARS-CoV-2 is considered to be mainly transmitted by inhalation of contaminated droplets and aerosols, SARS-CoV-2 is also detected in human feces and to a less extent in urine, and in raw wastewaters (to date viral RNA only) suggesting that other routes of infection may exist. Monitoring SARS-CoV-2 genomes in wastewaters has been proposed as a complementary approach for tracing the dynamics of virus transmission within human population connected to wastewater network. The understanding on SARS-CoV-2 transmission through wastewater surveillance, the development of epidemic modeling and the evaluation of SARS-CoV-2 transmission from contaminated wastewater are largely limited by our knowledge on viral RNA genome persistence and virus infectivity preservation in such an environment. Using an integrity based RT-qPCR assay this study led to the discovery that SARS-CoV-2 RNA can persist under several forms in wastewaters, which provides important information on the presence of SARS-CoV-2 in raw wastewaters and associated risk assessment.
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Affiliation(s)
- S Wurtzer
- Eau de Paris, R&D and Water quality department, 33 avenue Jean Jaurès, F-94200 Ivry sur Seine, France.
| | - P Waldman
- Sorbonne Université, CNRS, EPHE, UMR 7619 Metis, e-LTER Zone Atelier Seine, F-75005 Paris, France
| | - A Ferrier-Rembert
- Institut de Recherche Biomédicale des Armées, Microbiology & Infectious diseases, Virology unit, 1 place Valérie André, F-91220 Brétigny-sur-Orge, France
| | - G Frenois-Veyrat
- Institut de Recherche Biomédicale des Armées, Microbiology & Infectious diseases, Virology unit, 1 place Valérie André, F-91220 Brétigny-sur-Orge, France
| | - J M Mouchel
- Sorbonne Université, CNRS, EPHE, UMR 7619 Metis, e-LTER Zone Atelier Seine, F-75005 Paris, France
| | - M Boni
- Institut de Recherche Biomédicale des Armées, Microbiology & Infectious diseases, Virology unit, 1 place Valérie André, F-91220 Brétigny-sur-Orge, France
| | - Y Maday
- Sorbonne Université, CNRS, Université de Paris, Laboratoire Jacques-Louis Lions (LJLL), F-75005 Paris, France
| | - V Marechal
- Sorbonne Université, INSERM, Centre de Recherche Saint-Antoine, F-75012, Paris, France
| | - L Moulin
- Eau de Paris, R&D and Water quality department, 33 avenue Jean Jaurès, F-94200 Ivry sur Seine, France
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5
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Wurtzer S, Waldman P, Ferrier-Rembert A, Frenois-Veyrat G, Mouchel JM, Boni M, Maday Y, Marechal V, Moulin L. Several forms of SARS-CoV-2 RNA can be detected in wastewaters: Implication for wastewater-based epidemiology and risk assessment. WATER RESEARCH 2021; 198:117183. [PMID: 33962244 PMCID: PMC8060898 DOI: 10.1016/j.watres.2021.117183] [Citation(s) in RCA: 95] [Impact Index Per Article: 31.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2020] [Revised: 04/14/2021] [Accepted: 04/17/2021] [Indexed: 05/20/2023]
Abstract
The ongoing global pandemic of coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has been a public health emergency of international concern. Although SARS-CoV-2 is considered to be mainly transmitted by inhalation of contaminated droplets and aerosols, SARS-CoV-2 is also detected in human feces and to a less extent in urine, and in raw wastewaters (to date viral RNA only) suggesting that other routes of infection may exist. Monitoring SARS-CoV-2 genomes in wastewaters has been proposed as a complementary approach for tracing the dynamics of virus transmission within human population connected to wastewater network. The understanding on SARS-CoV-2 transmission through wastewater surveillance, the development of epidemic modeling and the evaluation of SARS-CoV-2 transmission from contaminated wastewater are largely limited by our knowledge on viral RNA genome persistence and virus infectivity preservation in such an environment. Using an integrity based RT-qPCR assay this study led to the discovery that SARS-CoV-2 RNA can persist under several forms in wastewaters, which provides important information on the presence of SARS-CoV-2 in raw wastewaters and associated risk assessment.
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Affiliation(s)
- S Wurtzer
- Eau de Paris, R&D and Water quality department, 33 avenue Jean Jaurès, F-94200 Ivry sur Seine, France.
| | - P Waldman
- Sorbonne Université, CNRS, EPHE, UMR 7619 Metis, e-LTER Zone Atelier Seine, F-75005 Paris, France
| | - A Ferrier-Rembert
- Institut de Recherche Biomédicale des Armées, Microbiology & Infectious diseases, Virology unit, 1 place Valérie André, F-91220 Brétigny-sur-Orge, France
| | - G Frenois-Veyrat
- Institut de Recherche Biomédicale des Armées, Microbiology & Infectious diseases, Virology unit, 1 place Valérie André, F-91220 Brétigny-sur-Orge, France
| | - J M Mouchel
- Sorbonne Université, CNRS, EPHE, UMR 7619 Metis, e-LTER Zone Atelier Seine, F-75005 Paris, France
| | - M Boni
- Institut de Recherche Biomédicale des Armées, Microbiology & Infectious diseases, Virology unit, 1 place Valérie André, F-91220 Brétigny-sur-Orge, France
| | - Y Maday
- Sorbonne Université, CNRS, Université de Paris, Laboratoire Jacques-Louis Lions (LJLL), F-75005 Paris, France
| | - V Marechal
- Sorbonne Université, INSERM, Centre de Recherche Saint-Antoine, F-75012, Paris, France
| | - L Moulin
- Eau de Paris, R&D and Water quality department, 33 avenue Jean Jaurès, F-94200 Ivry sur Seine, France
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6
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Petala M, Dafou D, Kostoglou M, Karapantsios T, Kanata E, Chatziefstathiou A, Sakaveli F, Kotoulas K, Arsenakis M, Roilides E, Sklaviadis T, Metallidis S, Papa A, Stylianidis E, Papadopoulos A, Papaioannou N. A physicochemical model for rationalizing SARS-CoV-2 concentration in sewage. Case study: The city of Thessaloniki in Greece. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 755:142855. [PMID: 33199018 PMCID: PMC7550162 DOI: 10.1016/j.scitotenv.2020.142855] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Revised: 09/06/2020] [Accepted: 10/02/2020] [Indexed: 05/17/2023]
Abstract
Detection of SARS-CoV-2 in sewage has been employed by several researchers as an alternative early warning indicator of virus spreading in communities, covering both symptomatic and asymptomatic cases. A factor that can seriously mislead the quantitative measurement of viral copies in sewage is the adsorption of virus fragments onto the highly porous solids suspended in wastewater, making them inaccessible. This depends not only on the available amount of suspended solids, but also on the amount of other dissolved chemicals which may influence the capacity of adsorption. On this account, the present work develops a mathematical framework, at various degrees of spatial complexity, of a physicochemical model that rationalizes the quantitative measurements of total virus fragments in sewage as regards the adsorption of virus onto suspended solids and the effect of dissolved chemicals on it. The city of Thessaloniki in Greece is employed as a convenient case study to determine the values of model variables. The present data indicate the ratio of the specific absorption (UV254/DOC) over the dissolved oxygen (DO) as the parameter with the highest correlation with viral copies. This implies a strong effect on viral inaccessibility in sewage caused (i) by the presence of humic-like substances and (ii) by virus decay due to oxidation and metabolic activity of bacteria. The present results suggest days where many fold corrections in the measurement of viral copies should be applied. As a result, although the detected RNA load in June 2020 is similar to that in April 2020, virus shedding in the city is about 5 times lower in June than in April, in line with the very low SARS-CoV-2 incidence and hospital admissions for COVID-19 in Thessaloniki in June.
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Affiliation(s)
- M Petala
- Laboratory of Environmental Engineering & Planning, Department of Civil Engineering, Aristotle University of Thessaloniki, Thessaloniki 54 124, Greece
| | - D Dafou
- Department of Genetics, Development and Molecular Biology, School of Biology, Aristotle University of Thessaloniki, Thessaloniki 54124, Greece
| | - M Kostoglou
- Laboratory of Chemical and Environmental Technology, Dept. of Chemistry, Aristotle University of Thessaloniki, Thessaloniki 54124, Greece
| | - Th Karapantsios
- Laboratory of Chemical and Environmental Technology, Dept. of Chemistry, Aristotle University of Thessaloniki, Thessaloniki 54124, Greece.
| | - E Kanata
- Prion Diseases Research Group, School of Pharmacy, Aristotle University of Thessaloniki, Thessaloniki 54124, Greece
| | - A Chatziefstathiou
- Department of Genetics, Development and Molecular Biology, School of Biology, Aristotle University of Thessaloniki, Thessaloniki 54124, Greece
| | - F Sakaveli
- Laboratory of Environmental Engineering & Planning, Department of Civil Engineering, Aristotle University of Thessaloniki, Thessaloniki 54 124, Greece
| | - K Kotoulas
- EYATH S.A., Thessaloniki Water Supply and Sewerage Company S.A., Thessaloniki, 54636, Greece
| | - M Arsenakis
- Department of Genetics, Development and Molecular Biology, School of Biology, Aristotle University of Thessaloniki, Thessaloniki 54124, Greece
| | - E Roilides
- Infectious Diseases Unit, 3rd Department of Pediatrics, Faculty of Medicine, Aristotle University School of Health Sciences, Hippokration General Hospital, Thessaloniki 54642, Greece
| | - T Sklaviadis
- Prion Diseases Research Group, School of Pharmacy, Aristotle University of Thessaloniki, Thessaloniki 54124, Greece
| | - S Metallidis
- Department of Haematology, First Department of Internal Medicine, Faculty of Medicine, AHEPA General Hospital, Aristotle University of Thessaloniki, Thessaloniki 54636, Greece
| | - A Papa
- Department of Microbiology, Medical School, Aristotle University of Thessaloniki, Thessaloniki 54124, Greece
| | - E Stylianidis
- School of Spatial Planning and Development, Faculty of Engineering, Aristotle University of Thessaloniki, 54124, Greece
| | - A Papadopoulos
- EYATH S.A., Thessaloniki Water Supply and Sewerage Company S.A., Thessaloniki, 54636, Greece
| | - N Papaioannou
- Faculty of Veterinary Medicine, School of Health Sciences, Aristotle University of Thessaloniki, Thessaloniki 54124, Greece
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