A Biofloc-Based Aquaculture System Bio-augmented with Probiotic Bacteria Bacillus tequilensis AP BFT3 Improves Culture Environment, Production Performances, and Proteomic Changes in Penaeus vannamei

Probiotics and Phytobiotics as Dietary and Water Supplements in Biofloc Aquaculture Systems

Biofloc technology (BFT) is a relatively new microbial-based cultivation system that can be adopted to accomplish more sustainable aquaculture and circularity goals. This review explores aspects of BFT integrating the utilization of probiotics and phytobiotics as dietary and water supplements. This scientific-based snapshot unpacks some physiological pathways and brings a literature review on how these supplements can boost water quality, as well as aquatic species' growth, health, and survival. Probiotics, live microorganisms that confer health benefits on the host when administered in adequate dosage, are noted for their ability to bolster animal defenses and sustain water quality in farming conditions. Recent studies showcased that selected bacteria, yeast, and fungi, once added into biofloc-based systems can enhance animal performance, act as a tool for water quality management and protect fish and crustaceans against diseases. On the other hand, phytobiotics are additives sourced from plants that normally are added into compounded feeds and are known for their health and growth benefits in aquatic animals. These additives contain plant-based substances/extracts that play a key role to suppress inflammation, pathogens, and can also act as antioxidants. These selected ingredients can promote healthy gut microbiota, improve feed efficiency, and turn on genes responsible for immunity improving disease resistance of fish/shrimp. According to this review, the adoption of probiotics and phytobiotics in BFT can greatly increase farm outputs by producing healthier animals, as well as promoting growth and consistent yields. Lastly, this review showcases the importance of proper section of probiotics and phytobiotics in order to achieve a functioning BFT. Despite its numerous advantages, BFT faces several challenges, especially related to microbial management. Probiotics and phytobiotics are practical tools that can play a crucial role to obtain a more stable environment with a desirable microbial population in water and gut. Future directions in the field should focus on optimizing the utilization of these supplements for a more resilient and sustainable BFT aquaculture.

Effects of dietary probiotic (Clostridium butyricum I9, C. butyricum G15, or Paraclostridium bifermentans X13) on growth, digestive enzyme activities, immunity, and intestinal microbiota of Pacific white shrimp (Penaeus vannamei)

Pacific white shrimp (Penaeus vannamei) is one of the most productive and economically important species globally. However, the development and continuous expansion of the farming scale led to an increase in the risk of disease occurrence in shrimp farming. The application of probiotics as an effective method for controlling diseases in aquaculture has been widely considered. In shrimp farming, several probiotics have been used and shown benefits to the health of the host. To diverse the sources of bacterial species as probiotics in shrimp farming, in this study, we aimed to elucidate the effects of dietary probiotics (Clostridium butyricum I9 (I9), Clostridium butyricum G15 (G15), or Paraclostridium bifermentans X13) on the growth, immune response and intestinal microbiome of white shrimp. Shrimps were fed with diets containing either phosphate-buffered saline (PBS), I9 (107 CFU/g feed), G15 (107 CFU/g feed), or X13 (107 CFU/g feed) for 30 days and followed by the challenge with Vibrio parahaemolyticus (Vp). The results showed that the survival rate, body weight gain, and special growth rate of shrimps in the I9, X13, and G15 groups significantly increased, compared to the PBS. The supplementation of probiotics increased the content of short-chain fatty acids and effectively maintained the normal morphology and structure of the intestinal tract and hepatopancreas. The I9, X13, or G15 groups showed a positive change in the diversity and abundance of gut bacteria. There was a significant up-regulation of CTL, SOD, proPO, Crustin, PEN2-4, and ALF1-3 genes in shrimps in the I9, X13, and G15. Additionally, dietary probiotics significantly increased the survival rate, maintained the intestinal structure, promoted the activities of SOD, AKP, ACP, and T-AOC enzymes, and reduced the level of MDA in shrimps after Vp infection. In conclusion, dietary supplementation of I9, G15, or X13 improved the growth, immunity, and disease resistance of Pacific white shrimp, providing a scientific basis for shrimp farming.

Effects of Commercial Probiotics on the Growth Performance, Intestinal Microbiota and Intestinal Histomorphology of Nile Tilapia (Oreochromis niloticus) Reared in Biofloc Technology (BFT)

Though different types of commercial probiotics are supplemented in biofloc technology (BFT), very little information is available on their effects on the farmed fish. Therefore, this study focused on evaluating the effects of three most commonly used commercial probiotics on the growth performance, intestinal histomorphology, and intestinal microbiota of Nile tilapia (Oreochromis niloticus) reared in BFT. Tilapia fry, with an average weight of 3.02 ± 0.50 g, were stocked at a density of 60 fry/0.2 m3, and cultured for 90 days. Three commercial probiotics were administered, with three replications for each: a single-genus multi-species probiotic (Bacillus spp.) (T1), a multi-genus multi-species probiotic (Bacillus sp., Lactobacillus sp., Nitrosomonas sp., Nitrobacter sp.) (T2), and a multi-species probiotic (Bacillus spp.) combined with enzymes including amylase, protease, cellulase, and xylanase (T3). The results showed significant variations in growth and feed utilization, with T3 outperforming other treatments in terms of weight gain, liver weight, and intestine weight. Adding Bacillus spp. with enzymes (T3) to water significantly increased the histomorphological parameters (villi length, villi depth, crypt depth, muscle thickness, intestinal thickness) as well as microbes (total viable count and total lactic acid bacteria) of intestine of fish compared to T1 and T2, leading to improved digestion and absorption responses. It is concluded that the supplementation of commercial probiotics has potential benefits on farmed fish species in BFT.

Swinging between the beneficial and harmful microbial community in biofloc technology: A paradox

Biofloc Technology (BFT) is proven to be the fulcrum of sustainable recirculating aquaculture system especially under zero water discharge condition. The efficiency of BFT system is reinforced by an unswerving microbial community in the system. Several researchers have made copious reports on the microorganisms in BFT and identified heterotrophic bacteria predominant in the microbial composition. A summary of these researches considers these microorganisms playing the role of chemo-photosynthetic autotrophs, organic detoxifiers, probiotic, decomposers/bioflocculants, bio-leachers and pathogens. Although these functional roles are well identified, the reports have failed to sufficiently illustrate the borderline at which these microbial communities fail to serve their beneficial roles in BFT system. This review paper firstly presents a snapshot of some indispensable water quality conditions and zootechnical variables aided by the microbial community in floc as well as the amphibolic process that synthesizes nutrient from the organic deposit in BFT. Furthermore, information on the microbial community in BFT is evaluated to have Bacillus sp., Lecane sp. and Pseudomonas sp. serving all-encompassing role in BFT while Vibrio sp. and Enterobacter sp. are pathogenic under unsuitable water quality conditions. Functional characterisation of the commonly reported microorganisms in BFT categorised 21.95 % as most critical, whose abundance indicates an efficient BFT.

Prediction of ammonia contaminants in the aquaculture ponds using soft computing coupled with wavelet analysis

Intensive aquaculture practices generate highly polluted organic effluents such as biological oxygen demand (BOD), alkalinity, total ammonia, nitrates, calcium, potassium, sodium, iron, and chlorides. In recent years, Inland aquaculture ponds in the western delta region of Andhra Pradesh have been intensively expanding and are more concerned about negative environmental impact. This paper presents the water quality analysis of aquaculture waters in 64 random locations in the western delta region of Andhra Pradesh. The average water quality index (WQI) was 126, with WQI values ranging from 21 to 456. Approximately 78% of the water samples were very poor and unsafe for drinking and domestic usage. The mean ammonia content in aquaculture water was 0.15 mg/L, and 78% of the samples were above the acceptable limit set by the World Health Organization (WHO) of 0.5 mg/L. The quantity of ammonia in the water ranged from 0.05 to 2.8 mg/L. The results show that ammonia levels exceed the permissible limits and are a significant concern in aquaculture waters due to toxicity. This paper also presents an intelligent soft computing approach to predicting ammonia levels in aquaculture ponds, using two novel approaches, such as the pelican optimization algorithm (POA) and POA coupled with discrete wavelet analysis (DWT-POA). The modified and enhanced POA with DWT can converge to higher performance when compared to standard POA, with an average percentage error of 1.964 and a coefficient of determination (R²) value of 0.822. Moreover, it was found that prediction models were reliable with good accuracy and simple to execute. Furthermore, these prediction models could help stakeholders and policymakers to make a real-time prediction of ammonia levels in intensive farming inland aquaculture ponds.