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Chen Z, Ren L, Li J, Fu N, Yun Q, Luo Y. Chromosomal-level genome assembly of Hylurgus ligniperda: insights into host adaptation and environmental tolerance. BMC Genomics 2024; 25:792. [PMID: 39164658 PMCID: PMC11337627 DOI: 10.1186/s12864-024-10711-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2024] [Accepted: 08/14/2024] [Indexed: 08/22/2024] Open
Abstract
BACKGROUND Hylurgus ligniperda (Coleoptera: Curculionidae) is a worldwide forest quarantine pest. It is widely distributed, has many host tree species, and possesses strong adaptability. To explore its environmental adaptability and the related molecular mechanisms, we conducted chromosome-level genome sequencing and analyzed the transcriptome under different environmental factors, identifying key expressed genes. RESULTS We employed PacBio, Illumina, and Hi-C sequencing techniques to assemble a 520 Mb chromosomal-level genome of H. ligniperda, obtaining an N50 of 39.97 Mb across 138 scaffolds. A total of 10,765 protein-coding genes were annotated after repeat masking. Fourteen chromosomes were identified, among which Hyli14 was determined to be the sex chromosome. Survival statistics were tested over various growth periods under high temperature and low humidity conditions. The maximum survival period of adults reached 292 days at 25 °C, 65% relative humidity. In comparison, the maximum survival period was 14 days under 35 °C, 65% relative humidity, and 106 days under 25°C, 40% relative humidity. This indicated that environmental stress conditions significantly reduced adults' survival period. We further conducted transcriptome analysis to screen for potentially influential differentially expressed genes, such as CYP450 and Histone. Subsequently, we performed gene family analysis to gain insights into their functions and interactions, such as CYP450 and Histone. CYP450 genes affected the detoxification metabolism of enzymes in the Cytochrome P450 pathway to adapt to different environments. Histone genes are involved in insect hormone biosynthesis and longevity-regulating pathways in H. ligniperda to adapt to environmental stress. CONCLUSIONS The genome at the chromosome level of H. ligniperda was assembled for the first time. The mortality of H. ligniperda increased significantly at 35 ℃, 65% RH, and 25 ℃, 40% RH. CYP450 and Histone genes played an important role in response to environmental stress. This genome offers a substantial genetic resource for investigating the molecular mechanisms behind beetle invasion and spread.
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Affiliation(s)
- Zhiqian Chen
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, 100083, China
| | - Lili Ren
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, 100083, China.
| | - Jiaxing Li
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, 100083, China
| | - Ningning Fu
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, 100083, China
- Department of Forest Protection, College of Forestry, Hebei Agricultural University, Baoding, 071033, China
| | | | - Youqing Luo
- Beijing Key Laboratory for Forest Pest Control, Beijing Forestry University, Beijing, 100083, China.
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Lantschner V, Gomez DF, Vilardo G, Stazione L, Ramos S, Eskiviski E, Fachinetti R, Schiappacassi M, Vallejos N, Germano M, Villacide J, Grilli MP, Martinez G, Ahumada R, Estay SA, Dumois I, Corley J. Distribution, Invasion History, and Ecology of Non-native Pine Bark Beetles (Coleoptera: Curculionidae: Scolytinae) in Southern South America. NEOTROPICAL ENTOMOLOGY 2024; 53:351-363. [PMID: 38236322 DOI: 10.1007/s13744-023-01125-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Accepted: 12/21/2023] [Indexed: 01/19/2024]
Abstract
The growth of international trade, coupled with an expansion of large-scale pine plantations in South America during the second half of the twentieth century, has significantly increased the opportunities for the invasion of forest insects. Bark beetles (Coleoptera: Curculionidae, Scolytinae) are a large and diverse group of insects, commonly recognized as one of the most important tree mortality agents in coniferous forests worldwide and an important group among invasive forest species. In this study, we combined data from field sampling with published records of established non-native pine bark beetles, to describe their distribution and invasion history in pine plantations across southern South America, reviewing the available information on their phenology and host range. We obtained records of established populations of six Eurasian species distributed in two major regions: the southwest region comprises plantations in Chile and the Argentine Patagonia, with four bark beetle species: Hylastes ater, Hylastes linearis, Hylurgus ligniperda, and Orthotomicus laricis; the northeastern zone includes northeastern Argentina, Uruguay, and southern Brazil, and includes three bark beetle species: Cyrtogenius luteus, H. ligniperda, and O. erosus. The establishment of non-native populations across the study area began in the 1950s, and from the 1980s onwards, there has been an exponential increase in introductions. We predict that several of these species will continue spreading across South America and that new species will continue arriving. We highlight the importance of international collaboration for early detection and management of non-native pine bark beetles.
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Affiliation(s)
- Victoria Lantschner
- Grupo de Ecología de Poblaciones de Insectos, Instituto de Investigaciones Forestales y Agropecuarias Bariloche, INTA EEA Bariloche - CONICET, Bariloche, Río Negro, Argentina.
| | | | - Gimena Vilardo
- Grupo de Ecología de Poblaciones de Insectos, Instituto de Investigaciones Forestales y Agropecuarias Bariloche, INTA EEA Bariloche - CONICET, Bariloche, Río Negro, Argentina
| | - Leonel Stazione
- Grupo de Ecología de Poblaciones de Insectos, Instituto de Investigaciones Forestales y Agropecuarias Bariloche, INTA EEA Bariloche - CONICET, Bariloche, Río Negro, Argentina
| | - Sergio Ramos
- Estación Experimental Agropecuaria Concordia, Instituto Nacional de Tecnología Agropecuaria (INTA), Concordia, Entre Ríos, Argentina
| | - Edgar Eskiviski
- Estación Experimental Agropecuaria Montecarlo, Instituto Nacional de Tecnología Agropecuaria (INTA), Montecarlo, Misiones, Argentina
| | - Romina Fachinetti
- Centro de Relevamiento y Evaluación de Recursos Agrícolas y Naturales (IMBIV), CONICET - Universidad Nacional de Córdoba, Córdoba, Argentina
| | | | | | - Monica Germano
- Grupo de Ecología de Poblaciones de Insectos, Instituto de Investigaciones Forestales y Agropecuarias Bariloche, INTA EEA Bariloche - CONICET, Campo Forestal General San Martín, Lago Puelo, Chubut, Argentina
| | - José Villacide
- Grupo de Ecología de Poblaciones de Insectos, Instituto de Investigaciones Forestales y Agropecuarias Bariloche, INTA EEA Bariloche - CONICET, Bariloche, Río Negro, Argentina
| | - Mariano P Grilli
- Centro de Relevamiento y Evaluación de Recursos Agrícolas y Naturales (IMBIV), CONICET - Universidad Nacional de Córdoba, Córdoba, Argentina
| | - Gonzalo Martinez
- Instituto Nacional de Investigación Agropecuaria (INIA), Tacuarembó, Uruguay
| | - Rodrigo Ahumada
- Bioforest - Arauco, Silviculture and Forest Health Division, Concepción, Chile
| | - Sergio A Estay
- Universidad Austral de Chile, Instituto de Ciencias Ambientales y Evolutivas, Valdivia, Chile
- Center of Applied Ecology and Sustainability (CAPES), Pontificia Universidad Catolica de Chile, Santiago, Chile
| | - Ignacio Dumois
- Departamento de Entomología, Laboratorio Vegetal, SENASA, Buenos Aires, Argentina
| | - Juan Corley
- Grupo de Ecología de Poblaciones de Insectos, Instituto de Investigaciones Forestales y Agropecuarias Bariloche, INTA EEA Bariloche - CONICET, Bariloche, Río Negro, Argentina
- Departamento de Ecología, CRUB, Universidad Nacional del Comahue, Bariloche, Argentina
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Ospina-Garcés SM, Ibarra-Juarez LA, Escobar F, Lira-Noriega A. Growth temperature effect on mandibles' ontogeny and sexual dimorphism in the ambrosia beetle Xyleborus affinis (Curculionidae: Scolytinae). ARTHROPOD STRUCTURE & DEVELOPMENT 2021; 61:101029. [PMID: 33607463 DOI: 10.1016/j.asd.2021.101029] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Revised: 12/17/2020] [Accepted: 01/12/2021] [Indexed: 06/12/2023]
Abstract
Ambrosia beetles from the genus Xyleborus are important vectors of fungal pathogens in forest and agricultural systems, yet the influence of temperature on their morphological development has been poorly studied. Because host colonization and ambrosial fungi cultivation is mostly restricted to females, it is possible to speculate on strong sexual dimorphism expression in secondary sexual characters and ecological segregation between sexes. Here, we determined the effect of different growing temperatures (17, 23, 26 and 29 °C) on mandible ontogeny of larvae and adult individuals of X. affinis, and sexual dimorphism in adults, in shape and size variation using geometric morphometrics. Mandible shape change showed significant differences in magnitude and direction through larval ontogeny among temperature treatments. Sexual shape and size dimorphism were found in adult mandibles, and the degree of sexual dimorphism was dependent on growth temperature, with a significant effect of the interaction between temperature and sex on mandible shape and size variation. Higher morphological differences were observed at the base of mandibles among temperature treatments in adults and a gradual narrowing trend with temperature increments. These findings could have consequences on feeding performance and fungus cultivation inside colonies, potentially influencing their ability to establish populations in new geographical areas.
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Affiliation(s)
- Sandra M Ospina-Garcés
- Instituto de Ecología, A. C., Red de Ecoetología, Carretera antigua a Coatepec 351, El Haya, Xalapa, 91070, México; Museo de Zoología "Alfonso L. Herrera", Facultad de Ciencias, Universidad Nacional Autónoma de México, México
| | - Luis A Ibarra-Juarez
- CONACYT Research Fellow, Instituto de Ecología, A.C., Red de Estudios Moleculares Avanzados, Carretera antigua a Coatepec 351, El Haya, Xalapa, 91070, México
| | - Federico Escobar
- Instituto de Ecología, A. C., Red de Ecoetología, Carretera antigua a Coatepec 351, El Haya, Xalapa, 91070, México
| | - Andrés Lira-Noriega
- CONACYT Research Fellow, Instituto de Ecología, A.C., Red de Estudios Moleculares Avanzados, Carretera antigua a Coatepec 351, El Haya, Xalapa, 91070, México.
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