1
|
Yang Z, Dai J, Pan J. 3D reconstruction from endoscopy images: A survey. Comput Biol Med 2024; 175:108546. [PMID: 38704902 DOI: 10.1016/j.compbiomed.2024.108546] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Revised: 01/05/2024] [Accepted: 04/28/2024] [Indexed: 05/07/2024]
Abstract
Three-dimensional reconstruction of images acquired through endoscopes is playing a vital role in an increasing number of medical applications. Endoscopes used in the clinic are commonly classified as monocular endoscopes and binocular endoscopes. We have reviewed the classification of methods for depth estimation according to the type of endoscope. Basically, depth estimation relies on feature matching of images and multi-view geometry theory. However, these traditional techniques have many problems in the endoscopic environment. With the increasing development of deep learning techniques, there is a growing number of works based on learning methods to address challenges such as inconsistent illumination and texture sparsity. We have reviewed over 170 papers published in the 10 years from 2013 to 2023. The commonly used public datasets and performance metrics are summarized. We also give a taxonomy of methods and analyze the advantages and drawbacks of algorithms. Summary tables and result atlas are listed to facilitate the comparison of qualitative and quantitative performance of different methods in each category. In addition, we summarize commonly used scene representation methods in endoscopy and speculate on the prospects of deep estimation research in medical applications. We also compare the robustness performance, processing time, and scene representation of the methods to facilitate doctors and researchers in selecting appropriate methods based on surgical applications.
Collapse
Affiliation(s)
- Zhuoyue Yang
- State Key Laboratory of Virtual Reality Technology and Systems, Beihang University, 37 Xueyuan Road, Haidian District, Beijing, 100191, China; Peng Cheng Lab, 2 Xingke 1st Street, Nanshan District, Shenzhen, Guangdong Province, 518000, China
| | - Ju Dai
- Peng Cheng Lab, 2 Xingke 1st Street, Nanshan District, Shenzhen, Guangdong Province, 518000, China
| | - Junjun Pan
- State Key Laboratory of Virtual Reality Technology and Systems, Beihang University, 37 Xueyuan Road, Haidian District, Beijing, 100191, China; Peng Cheng Lab, 2 Xingke 1st Street, Nanshan District, Shenzhen, Guangdong Province, 518000, China.
| |
Collapse
|
2
|
Zhang G, Huang Z, Lin J, Li Z, Cao E, Pang Y, sun W. A 3D reconstruction based on an unsupervised domain adaptive for binocular endoscopy. Front Physiol 2022; 13:994343. [PMID: 36117683 PMCID: PMC9475117 DOI: 10.3389/fphys.2022.994343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Accepted: 08/01/2022] [Indexed: 11/16/2022] Open
Abstract
In minimally invasive surgery, endoscopic image quality plays a crucial role in surgery. Aiming at the lack of a real parallax in binocular endoscopic images, this article proposes an unsupervised adaptive neural network. The network combines adaptive smoke removal, depth estimation of binocular endoscopic images, and the 3D display of high-quality endoscopic images. We simulated the smoke generated during surgery by artificially adding fog. The training images of U-Net fused by Laplacian pyramid are introduced to improve the network’s ability to extract intermediate features. We introduce Convolutional Block Attention Module to obtain the optimal parameters of each layer of the network. We utilized the disparity transformation relationship between left- and right-eye images to combine the left-eye images with disparity in HS-Resnet to obtain virtual right-eye images as labels for self-supervised training. This method extracts and fuses the parallax images at different scale levels of the decoder, making the generated parallax images more complete and smoother. A large number of experimental research results show that the scheme can remove the smoke generated during the operation, effectively reconstruct the 3D image of the tissue structure of the binocular endoscope, and at the same time, preserve the contour, edge, detail, and texture of the blood vessels in the medical image. Compared with the existing similar schemes, various indicators have been greatly improved. It has good clinical application prospects.
Collapse
Affiliation(s)
- Guo Zhang
- School of Communication and Information Engineering, Chongqing University of Posts and Telecommunication, Chongqing, China
- School of Medical Information and Engineering, Southwest Medical University, Luzhou, China
| | - Zhiwei Huang
- School of Communication and Information Engineering, Chongqing University of Posts and Telecommunication, Chongqing, China
- School of Medical Information and Engineering, Southwest Medical University, Luzhou, China
| | - Jinzhao Lin
- School of Optoelectronic Engineering, Chongqing University of Posts and Telecommunication, Chongqing, China
| | - Zhangyong Li
- School of Bioinformatics, Chongqing University of Posts and Telecommunication, Chongqing, China
| | - Enling Cao
- School of Software Engineering, Chongqing University of Posts and Telecommunication, Chongqing, China
| | - Yu Pang
- School of Optoelectronic Engineering, Chongqing University of Posts and Telecommunication, Chongqing, China
- *Correspondence: Yu Pang, ; Weiwei sun,
| | - Weiwei sun
- School of Optoelectronic Engineering, Chongqing University of Posts and Telecommunication, Chongqing, China
- *Correspondence: Yu Pang, ; Weiwei sun,
| |
Collapse
|
3
|
AIM in Endoscopy Procedures. Artif Intell Med 2022. [DOI: 10.1007/978-3-030-64573-1_164] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
|
4
|
Marzullo A, Moccia S, Calimeri F, De Momi E. AIM in Endoscopy Procedures. Artif Intell Med 2021. [DOI: 10.1007/978-3-030-58080-3_164-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2022]
|