Strobel OK, Keyes RS, Bobst AM. An electron paramagnetic resonance probe to detect local Z-DNA conformations.
Biochem Biophys Res Commun 1990;
166:1435-40. [PMID:
2154981 DOI:
10.1016/0006-291x(90)91027-p]
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Abstract
We present spectroscopic evidence for an electron paramagnetic resonance (EPR) probe to detect local Z-DNA conformations in synthetic DNA. A spin labeled deoxycytidine-5'-triphosphate (pppDCAT) was co-polymerized with Micrococcus luteus DNA polymerase to yield the spin active alternating co-polymer (dG-dC,DCAT)n. The EPR spectrum of (dG-dC,DCAT)n in the Z-DNA conformation indicates a decrease in the local base dynamics by about a factor of two as compared to that computed for B-DNA. A control experiment conducted with (dA-dT, DUAT)n under similar salt conditions rules out the possibility of observing salt induced artifacts.
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