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Ptushenko VV, Semenov AY. Lel A. Drachev and the Direct Electrometric Method. BIOCHEMISTRY. BIOKHIMIIA 2023; 88:1417-1427. [PMID: 38105014 DOI: 10.1134/s0006297923100012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Revised: 07/14/2023] [Accepted: 07/17/2023] [Indexed: 12/19/2023]
Abstract
In the bioenergetics studies, the direct electrometric method played an important role. This method is based on measuring the electrical potential difference (Δψ) between two compartments of the experimental cell generated by some membrane proteins. These proteins are incorporated into closed lipid-protein membrane vesicles associated with an artificial lipid membrane that separates the compartments. The very existence of such proteins able to generate Δψ was one of the consequences of Peter Mitchell's chemiosmotic concept. The discovery and investigation of their functioning contributed to the recognition of this concept and, eventually the well-deserved awarding of the Nobel Prize to P. Mitchell. Lel A. Drachev (1926-2022) was one of the main authors of the direct electrometrical method. With his participation, key studies were carried out on the electrogenesis of photosynthetic and respiratory membrane proteins, including bacteriorhodopsin, visual rhodopsin, photosynthetic bacterial reaction centers, cytochrome oxidase and others.
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Affiliation(s)
- Vasily V Ptushenko
- Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119992, Russia
| | - Alexey Y Semenov
- Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119992, Russia.
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Ptushenko VV, Cherepanov DA, Krishtalik LI, Semenov AY. Semi-continuum electrostatic calculations of redox potentials in photosystem I. PHOTOSYNTHESIS RESEARCH 2008; 97:55-74. [PMID: 18483776 DOI: 10.1007/s11120-008-9309-y] [Citation(s) in RCA: 74] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2007] [Accepted: 04/24/2008] [Indexed: 05/19/2023]
Abstract
The midpoint redox potentials (E(m)) of all cofactors in photosystem I from Synechococcus elongatus as well as of the iron-sulfur (Fe(4)S(4)) clusters in two soluble ferredoxins from Azotobacter vinelandii and Clostridium acidiurici were calculated within the framework of a semi-continuum dielectric approach. The widely used treatment of proteins as uniform media with single dielectric permittivity is oversimplified, particularly, because permanent charges are considered both as a source for intraprotein electric field and as a part of dielectric polarizability. Our approach overcomes this inconsistency by using two dielectric constants: optical epsilon(o)=2.5 for permanent charges pre-existing in crystal structure, and static epsilon(s) for newly formed charges. We also take into account a substantial dielectric heterogeneity of photosystem I revealed by photoelectric measurements and a liquid junction potential correction for E(m) values of relevant redox cofactors measured in aprotic solvents. We show that calculations based on a single permittivity have the discrepancy with experimental data larger than 0.7 V, whereas E(m) values calculated within our approach fall in the range of experimental estimates. The electrostatic analysis combined with quantum chemistry calculations shows that (i) the energy decrease upon chlorophyll dimerization is essential for the downhill mode of primary charge separation between the special pair P(700) and the primary acceptor A(0); (ii) the primary donor is apparently P(700) but not a pair of accessory chlorophylls; (iii) the electron transfer from the A branch quinone Q(A) to the iron-sulfur cluster F(X) is most probably downhill, whereas that from the B branch quinone Q(B) to F(X) is essentially downhill.
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Affiliation(s)
- Vasily V Ptushenko
- A.N.Belozersky Institute of Physical-Chemical Biology, Moscow State University, Moscow, Russia
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Semenov AY, Mamedov MD, Chamorovsky SK. Photoelectric studies of the transmembrane charge transfer reactions in photosystem I pigment-protein complexes. FEBS Lett 2003; 553:223-8. [PMID: 14572628 DOI: 10.1016/s0014-5793(03)01032-9] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
The results of studies of charge transfer in cyanobacterial photosystem I (PS I) using the photoelectric method are reviewed. The electrogenicity in the PS I complex and its interaction with natural donors (plastocyanin, cytochrome c(6)), natural acceptors (ferredoxin, flavodoxin), or artificial acceptors and donors (methyl viologen and other redox dyes) were studied. The operating dielectric constant values in the vicinity of the charge transfer carriers in situ were calculated. The profile of distribution of the dielectric constant along the PS I pigment-protein complex (from plastocyanin or cytochrome c(6) through the chlorophyll dimer P700 to the acceptor complex) was estimated, and possible mechanisms of correlation between the local dielectric constant and electron transfer rate constant were discussed.
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Affiliation(s)
- Alexey Yu Semenov
- A.N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, Russia.
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Paillotin G, Leibl W, Gapiński J, Breton J, Dobek A. Light gradients in spherical photosynthetic vesicles. Biophys J 1998; 75:124-33. [PMID: 9649373 PMCID: PMC1299685 DOI: 10.1016/s0006-3495(98)77500-9] [Citation(s) in RCA: 44] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023] Open
Abstract
Light-gradient photovoltage measurements were performed on EDTA-treated thylakoids and on osmotically swollen thylakoids (blebs), both of spherical symmetry but of different sizes. In the case of EDTA vesicles, a negative polarity (due to the normal light gradient) was observed in the blue range of the absorption spectrum, and a positive polarity, corresponding to an inverse light gradient, was observed at lambda = 530 and lambda = 682 nm. The sign of the photovoltage polarity measured in large blebs (swollen thylakoids) is the same as that obtained for whole chloroplasts, although differences in the amplitudes are observed. An approach based on the use of polar coordinates was adapted for a theoretical description of these membrane systems of spherical symmetry. The light intensity distribution and the photovoltage in such systems were calculated. Fits to the photovoltage amplitudes, measured as a function of light wavelength, made it possible to derive the values of the dielectric constant of the protein, epsilons = 3, and the refractive index of the photosynthetic membrane for light propagating perpendicular and parallel to the membrane surface, nt = 1.42 and nn = 1.60, respectively. The latter two values determine the birefringence of the biological membrane, Deltan = nn - nt = 0.18.
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Wulf K, Trissl HW. Competition between annihilation and trapping leads to strongly reduced yields of photochemistry under ps-flash excitation. PHOTOSYNTHESIS RESEARCH 1996; 48:255-262. [PMID: 24271306 DOI: 10.1007/bf00041016] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/1995] [Accepted: 06/11/1996] [Indexed: 06/02/2023]
Abstract
Excitation of photosynthetic systems with short intense flashes is known to lead to exciton-exciton annihilation processes. Here we quantify the effect of competition between annihilation and trapping for Photosystem II, Photosystem I (thylakoids from peas and membranes from the cyanobacterium Synechocystis sp.), as well as for the purple bacterium Rhodospirillum rubrum. In none of the cases it was possible to reach complete product saturation (i.e. closure of reaction centers) even with an excitation energy exceeding 10 hits per photosynthetic unit. The parameter α introduced by Deprez et al. ((1990) Biochim. Biophys. Acta 1015: 295-303) describing the competition between exciton-exciton annihilation and trapping was calculated to range between ≈4.5 (PS II) and ≈6 (Rs. rubrum). The rate constants for bimolecular exciton-exciton annihilation ranged between (42 ps)(-1) and (2.5 ps)(-1) for PS II and PS I-membranes of Synechocystis, respectively. The data are interpreted in terms of hopping times (i.e. mean residence time of the excited state on a chromophore) according to random walk in isoenergetic antenna.
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Affiliation(s)
- K Wulf
- Abteilung Biophysik, Fachbereich Biologie/Chemie, Universität Osnabrück, Barbarastraße 11, D-49069, Osnabrück, Germany
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Pålsson LO, Tjus SE, Andersson B, Gillbro T. Energy transfer in photosystem I. Time resolved fluorescence of the native photosystem I complex and its core complex. Chem Phys 1995. [DOI: 10.1016/0301-0104(95)00077-2] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Trissl HW, Wulf K. Fast photovoltage measurements in photosynthesis. II. Experimental methods. ACTA ACUST UNITED AC 1995. [DOI: 10.1002/bspy.350010109] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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Mamedov MD, Beshta OE, Samuilov VD. Electrogenicity at the secondary quinone acceptor site of cyanobacterial photosystem II. FEBS Lett 1994; 350:96-8. [PMID: 8062933 DOI: 10.1016/0014-5793(94)00742-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Flash-induced generation of the electric potential difference (delta psi) by a direct electrometrical method was studied in Anacystis nidulans photosystem II-containing proteoliposomes associated with a phospholipid-impregnated collodion film. Besides a rapid phase of delta psi generation corresponding to charge separation between P680 and QA, an additional electrogenic phase with a characteristic time of 0.27 ms at pH 7.0 was observed after the second laser flash. The maximal amplitude of this phase was approx. 4% of that related to the P680+QA- formation. The sensitivity of this phase to DCMU, the flash-number dependence of its amplitude as well as the amplitude and the rate constant pH-dependences, indicate that it is due to the dismutation of QA- and QB- and to subsequent protonation of a doubly reduced plastoquinone QB2-.
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Affiliation(s)
- M D Mamedov
- Department of Cell Physiology and Immunology, School of Biology, Moscow State University, Russian Federation
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An electrogenic reaction associated with the re-reduction of P680 by Tyr Z in Photosystem II. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 1994. [DOI: 10.1016/0005-2728(94)90154-6] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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Meszéna G. Wavelength dependence and kinetics of the photovoltaic effects in chloroplast suspensions. Biophys Chem 1994. [DOI: 10.1016/0301-4622(93)e0088-m] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Leibl W, Sinning I, Ewald G, Michel H, Breton J. Evidence that serine L223 is involved in the proton transfer pathway to QB in the photosynthetic reaction center of Rhodopseudomonas viridis. Biochemistry 1993; 32:1958-64. [PMID: 8448155 DOI: 10.1021/bi00059a012] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
In the reaction center of purple photosynthetic bacteria, the reducing equivalents produced by primary charge separation are exported via an ubiquinone molecule working as a two-electron shuttle. This loosely-bound quinone, called QB, accepts in successive flashes two electrons from the tightly bound primary quinone acceptor QA, along with two protons from the external medium. The surrounding protein plays an important role in stabilizing the semiquinone anion and in providing a pathway for protons from the cytoplasmic phase to QB. Herbicides of the triazine type compete with QB for the binding pocket and their binding is controlled by nearby amino acid residues. We have studied the kinetics of the first and second electron transfer from QA to QB in two herbicide-resistant mutants from Rhodopseudomonas viridis, T1 (ArgL217-->His,Ser L223-->Ala) and MAV5 (Arg L217-->His, Val L220-->Leu), in order to determine whether these residues are involved in proton transfer to the reduced QB. The main effect of the mutant T1 was a drastic (600-fold at pH 7) decrease in the rate of the second electron transfer to QB compared to the wild type. In contrast, the rate of the second electron transfer in the mutant MAV5 was decreased only slightly (10-fold) in the pH range from 7 to 11. We attribute the inhibition of the second electron transfer in the Ser L223-->Ala mutation to an essential role of Ser L223 in the donation of the first proton to the reduced QB.(ABSTRACT TRUNCATED AT 250 WORDS)
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Affiliation(s)
- W Leibl
- Département de Biologie Cellulaire et Moléculaire, Centre d'Etudes de Saclay, Gif-sur-Yvette, France
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Trissl HW. Long-wavelength absorbing antenna pigments and heterogeneous absorption bands concentrate excitons and increase absorption cross section. PHOTOSYNTHESIS RESEARCH 1993; 35:247-263. [PMID: 24318755 DOI: 10.1007/bf00016556] [Citation(s) in RCA: 97] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/1992] [Accepted: 10/05/1992] [Indexed: 06/02/2023]
Abstract
The light-harvesting apparatus of photosynthetic organisms is highly optimized with respect to efficient collection of excitation energy from photons of different wavelengths and with respect to a high quantum yield of the primary photochemistry. In many cases the primary donor is not an energetic trap as it absorbs hypsochromically compared to the most red-shifted antenna pigment present (long-wavelength antenna). The possible reasons for this as well as for the spectral heterogeneity which is generally found in antenna systems is examined on a theoretical basis using the approach of thermal equilibration of the excitation energy. The calculations show that long-wavelength antenna pigments and heterogeneous absorption bands lead to a concentration of excitons and an increased effective absorption cross section. The theoretically predicted trapping times agree remarkably well with experimental data from several organisms. It is shown that the kinetics of the energy transfer from a long-wavelength antenna pigment to a hypsochromically absorbing primary donor does not represent a major kinetic limitation. The development of long-wavelength antenna and spectrally heterogeneous absorption bands means an evolutionary advantage based on the chromatic adaptation of photosynthetic organelles to spectrally filtered light caused by self-absorption.
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Affiliation(s)
- H W Trissl
- Abt. Biophysik, Fachbereich Biologie/Chemie, Universität Osnabrück, Barbarastr. 11, D-4500, Osnabrück, Germany
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Trissl HW, Hecks B, Wulf K. INVARIABLE TRAPPING TIMES IN PHOTOSYSTEM I UPON EXCITATION OF MINOR LONG-WAVELENGTH-ABSORBING PIGMENTS. Photochem Photobiol 1993. [DOI: 10.1111/j.1751-1097.1993.tb02264.x] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Dobek A, Deprez J, Paillotin G, Leibl W, Trissl HW, Breton J. Excitation trapping efficiency and kinetics in Rb. sphaeroides R26.1 whole cells probed by photovoltage measurements on the picosecond time-scale. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 1990. [DOI: 10.1016/0005-2728(90)90036-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Relationship between the fraction of closed photosynthetic reaction centers and the amplitude of the photovoltage from light-gradient experiments. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 1990. [DOI: 10.1016/0005-2728(90)90035-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Competition between energy trapping and exciton annihilation in the lake model of the photosynthetic membrane of purple bacteria. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 1990. [DOI: 10.1016/0005-2728(90)90034-2] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Trissl HW, Breton J, Deprez J, Dobek A, Leibl W. Trapping kinetics, annihilation, and quantum yield in the photosynthetic purple bacterium Rps. viridis as revealed by electric measurement of the primary charge separation. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 1990. [DOI: 10.1016/0005-2728(90)90037-5] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Leibl W, Breton J, Deprez J, Trissl HW. Photoelectric study on the kinetics of trapping and charge stabilization in oriented PS II membranes. PHOTOSYNTHESIS RESEARCH 1989; 22:257-275. [PMID: 24424815 DOI: 10.1007/bf00048304] [Citation(s) in RCA: 75] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Excitation energy trapping and charge separation in Photosystem II were studied by kinetic analysis of the fast photovoltage detected in membrane fragments from peas with picosecond excitation. With the primary quinone acceptor oxidized the photovoltage displayed a biphasic rise with apparent time constants of 100-300 ps and 550±50 ps. The first phase was dependent on the excitation energy whereas the second phase was not. We attribute these two phases to trapping (formation of P-680(+) Phe(-)) and charge stabilization (formation of P-680(+) QA (-)), respectively. A reversibility of the trapping process was demonstrated by the effect of the fluorescence quencher DNB and of artificial quinone acceptors on the apparent rate constants and amplitudes. With the primary quinone acceptor reduced a transient photoelectric signal was observed and attributed to the formation and decay of the primary radical pair. The maximum concentration of the radical pair formed with reduced QA was about 30% of that measured with oxidized QA. The recombination time was 0.8-1.2 ns.The competition between trapping and annihilation was estimated by comparison of the photovoltage induced by short (30 ps) and long (12 ns) flashes. These data and the energy dependence of the kinetics were analyzed by a reversible reaction scheme which takes into account singlet-singlet annihilation and progressive closure of reaction centers by bimolecular interaction between excitons and the trap. To put on firmer grounds the evaluation of the molecular rate constants and the relative electrogenicity of the primary reactions in PS II, fluorescence decay data of our preparation were also included in the analysis. Evidence is given that the rates of radical pair formation and charge stabilization are influenced by the membrane potential. The implications of the results for the quantum yield are discussed.
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Affiliation(s)
- W Leibl
- Universität Osnabrück, Fachbereich Biologie/Chemie, Biophysik, Barbarastr. 11, D-4500, Osnabrück, FRG
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Holzwarth AR. Applications of ultrafast laser spectroscopy for the study of biological systems. Q Rev Biophys 1989; 22:239-326. [PMID: 2695961 DOI: 10.1017/s0033583500002985] [Citation(s) in RCA: 65] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
The discovery of mode-locked laser operation now nearly two decades ago has started a development which enables researchers to probe the dynamics of ultrafast physical and chemical processes at the molecular level on shorter and shorter time scales. Naturally the first applications were in the fields of photophysics and photochemistry where it was then possible for the first time to probe electronic and vibrational relaxation processes on a sub-nanosecond timescale. The development went from lasers producing pulses of many picoseconds to the shortest pulses which are at present just a few femtoseconds long. Soon after their discovery ultrashort pulses were applied also to biological systems which has revealed a wealth of information contributing to our understanding of a broadrange of biological processes on the molecular level.It is the aim of this review to discuss the recent advances and point out some future trends in the study of ultrafast processes in biological systems using laser techniques. The emphasis will be mainly on new results obtained during the last 5 or 6 years. The term ultrafast means that I shall restrict myself to sub-nanosecond processes with a few exceptions.
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Affiliation(s)
- A R Holzwarth
- Max-Planck-Institut für Strahlenchemie, Mülheim/Ruhr, FRG
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Meszéna G, Devault D. Investigations of the polarity of the photo-induced electrical signal of chloroplast suspensions. PHOTOSYNTHESIS RESEARCH 1989; 22:115-122. [PMID: 24424683 DOI: 10.1007/bf00114771] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/1989] [Accepted: 04/19/1989] [Indexed: 06/03/2023]
Abstract
This paper reports data and considerations relevant to the question of what determines the polarity of the voltages induced between electrodes in a suspension of chloroplasts when irradiated with a flash of light from a laser or flash-lamp. We found positive polarity (electrode nearest the light source positive) with excitation by ns pulses at 694, 539 and 530 nm wavelength. This and the earlier finding (Meszéna et al. (1988) Studia Biophysica 126:77-86), confirmed in this work, of negative polarity at 420 nm confirm, in part, the action spectrum reported by Gräber and Trissl (1981 FEBS Let 123:95-99) using 50 μs flashes. Gräber and Trissl also showed that swelling the chloroplasts can reverse the polarity.Negative polarity is expected on the basis of a simple light-gradient in the sample together with what is known about photosynthetic charge movements. The cause of positive polarities has eluded explanation. Duration of flash was suspected. We tried a random series of short flashes averaging about 10 μs apart and found that all simply duplicated the first flash. If there is any effect of light following the first flash it must occur in less than about 10 μs.We suggest that the polarity is determined by a complicated interference pattern of the light in the chloroplast which can focus it onto different parts, front or back, depending upon the wavelength of the light and the structure of the chloroplast.
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Affiliation(s)
- G Meszéna
- Department of Atomic Physics, Roland Eötvös University, Puskin u.5-7, H-1088, Budapest, Hungary
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Vos MH, van Gorkom HJ. Thermodynamics of electron transport in Photosystem I studied by electric field-stimulated charge recombination. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 1988. [DOI: 10.1016/0005-2728(88)90089-8] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Kischkoweit C, Leibl W, Trissl HW. Theoretical and experimental study of trapping times and antenna organization in pea chloroplasts by means of the artificial fluorescence quencher m-dinitrobenzene. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 1988. [DOI: 10.1016/0005-2728(88)90035-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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