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Agarwal B. A role for anions in ATP synthesis and its molecular mechanistic interpretation. J Bioenerg Biomembr 2011; 43:299-310. [PMID: 21647635 DOI: 10.1007/s10863-011-9358-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2010] [Accepted: 04/28/2011] [Indexed: 01/26/2023]
Abstract
ATP, the 'universal biological energy currency', is synthesized by utilizing energy either from oxidation of fuels or from light, via the process of oxidative and photo-phosphorylation respectively. The process is mediated by the enzyme F(1)F(0)-ATP synthase, using the free energy of ion gradients in the final energy catalyzing step, i.e., the synthesis of ATP from ADP and inorganic phosphate (P(i)). The details of the molecular mechanism of ATP synthesis are among the most important fundamental issues in biology and hence need to be properly understood. In this work, a role for anions in making ATP has been found. New experimental data has been reported on the inhibition of ATP synthesis at nanomolar concentrations by the potent, specific anion channel blockers 4,4'-diisothiocyanostilbene-2, 2'-disulphonic acid (DIDS) and tributyltin chloride (TBTCl). Based on these inhibition studies, attention has been drawn to anion translocation (in addition to proton translocation) as a requirement for ATP synthesis. The type of inhibition has been quantified and an overall kinetic scheme for mixed inhibition that explains the data has been evolved. The experimental data and the type of inhibition found have been interpreted in the light of the torsional mechanism of energy transduction and ATP synthesis (Nath J Bioenerg Biomembr 42:293-300, 2010a; J Bioenerg Biomembr 42:301-309, 2010b). This detailed and unified mechanism resolves long-standing problems and inconsistencies in the first theories (Slater Nature 172:975-978, 1953; Williams J Theor Biol 1:1-17, 1961; Mitchell Nature 191:144-148, 1961; Mitchell Biol Rev 41:445-502, 1966), makes several novel predictions that are experimentally verifiable (Nath Biophys J 90:8-21, 2006a; Process Biochem 41:2218-2235, 2006b), and provides us with a new and fruitful paradigm in bioenergetics. The interpretation presented here provides intelligent answers to the unexplained existing results in the literature. It is shown that mechanistic interpretation of the experimental data requires substantial addition to available conceptual foundations such that present concepts, theories, and mechanisms must be revised.
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Affiliation(s)
- Bhawana Agarwal
- Department of Biochemical Engineering and Biotechnology, Indian Institute of Technology, Delhi, Hauz Khas, New Delhi, 110 016, India.
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de Grey AD. Incorporation of transmembrane hydroxide transport into the chemiosmotic theory. BIOELECTROCHEMISTRY AND BIOENERGETICS (LAUSANNE, SWITZERLAND) 1999; 49:43-50. [PMID: 10619447 DOI: 10.1016/s0302-4598(99)00064-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A cornerstone of textbook bioenergetics is that oxidative ATP synthesis in mitochondria requires, in normal conditions of internal and external pH, a potential difference (delta psi) of well over 100 mV between the aqueous compartments that the energy-transducing membrane separates. Measurements of delta psi inferred from diffusion of membrane-permeant ions confirm this, but those using microelectrodes consistently find no such delta psi--a result ostensibly irreconcilable with the chemiosmotic theory. Transmembrane hydroxide transport necessarily accompanies mitochondrial ATP synthesis, due to the action of several carrier proteins; this nullifies some of the proton transport by the respiratory chain. Here, it is proposed that these carriers' structure causes the path of this "lost" proton flow to include a component perpendicular to the membrane but within the aqueous phases, so maintaining a steady-state proton-motive force between the water at each membrane surface and in the adjacent bulk medium. The conflicting measurements of delta psi are shown to be consistent with the response of this system to its chemical environment.
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Affiliation(s)
- A D de Grey
- Department of Genetics, University of Cambridge, UK.
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Cortese JD, Voglino AL, Hackenbrock CR. The ionic strength of the intermembrane space of intact mitochondria is not affected by the pH or volume of the intermembrane space. BIOCHIMICA ET BIOPHYSICA ACTA 1992; 1100:189-97. [PMID: 1610874 DOI: 10.1016/0005-2728(92)90081-c] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Ionic strength affects the electron transport activity of cytochrome c through its electrostatic interactions with redox partners and membrane lipids. We previously reported (Cortese, J.D., Voglino, A.L. and Hackenbrock, C.R. (1991) J. Cell Biol. 113, 1331-1340) that the ionic strength (I) of the intermembrane space (IMS-I) in isolated, intact condensed mitochondria is similar to the external, bulk I, over a wide range of bulk I. We now consider the possible effects of IMS-pH and IMS-volume, both variable parameters of mitochondrial function in situ, on IMS-I. IMS-pH and IMS-I were measured with pH- and I-sensitive fluorescent probes (highly fluorescent FITC-dextran for IMS-pH and FITC-BSA for IMS-I). These probes were delivered into the IMS of intact mitochondria via probe encapsulation into asolectin vesicles, followed by low pH-induced fusion of the vesicles with the outer membranes of intact mitochondria. IMS-pH was found to be 0.4-0.5 units lower than bulk pH over the pH range 6.0-8.5 for mitochondria with a large IMS-volume separating the two mitochondrial membranes (condensed configuration), and 0-0.2 units lower for mitochondria with a small IMS-volume and membranes closely opposed (orthodox configuration). This small pH difference between IMS-pM and bulk pH did not influence the similarity between IMS-I and bulk I. When the IMS-volume was osmotically decreased, bringing the two mitochondrial membranes in close proximity as in the orthodox configuration, IMS-I followed the bulk I above 10 mM but did not respond to changes in bulk I below 10 mM. The lack of response of the IMS-I below 10 mM indicates that the close proximity of the two mitochondrial membranes excludes ions only at low, nonphysiological I. Since the similarity of IMS-I and bulk I is unaffected by either IMS-pH or IMS-volume above a bulk I of 10 mM, at cytosolic physiological I (i.e., 100-150 mM) cytochrome c can be expected to be a free, three-dimensional diffusant in the IMS irrespective of the pH or volume of the IMS.
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Affiliation(s)
- J D Cortese
- Department of Cell Biology and Anatomy, University of North Carolina, School of Medicine, Chapel Hill 27599-7090
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Miyoshi H, Nishioka T, Fujita T. Quantitative relationship between protonophoric and uncoupling activities of analogs of SF6847 (2,6-di-t-butyl-4-(2',2'-dicyanovinyl)phenol). BIOCHIMICA ET BIOPHYSICA ACTA 1987; 891:293-9. [PMID: 3567180 DOI: 10.1016/0005-2728(87)90224-6] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Uncoupling activity with rat liver mitochondria and protonophoric activity across the lecithin liposomal membranes were measured for a series of non-classical uncouplers related to the most potent uncoupler known until now, SF6847 (2,6-di-t-butyl-4-(2',2'-dicyanovinyl)phenol). The correlation between uncoupling and protonophoric activities for a number of uncouplers, both non-classical and classical (simply substituted phenols), was examined quantitatively. Correlation was excellent when such factors as the stability of anionic species in the membrane phase and the difference in the pH conditions of the extramembranous aqueous phase were taken into account. Carbonylcyanide m-chlorophenylhydrazone (CCCP) and carbonylcyanide p-trifluoromethoxyphenylhydrazone (FCCP), which are structurally different, were correlated in a way that resembled the correlation of phenolic compounds, so we think that the mode of action of weakly acidic uncouplers was the same regardless of the structural type. Our findings were evidence for the shuttle-type mechanism of uncoupling action.
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Singh AP, Nicholls P. Cyanine and safranine dyes as membrane potential probes in cytochrome c oxidase reconstituted proteoliposomes. JOURNAL OF BIOCHEMICAL AND BIOPHYSICAL METHODS 1985; 11:95-108. [PMID: 2993401 DOI: 10.1016/0165-022x(85)90045-4] [Citation(s) in RCA: 29] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Safranine and the cyanine dye, 3',3'-dipropylthiadicarbocyanine (diSC3-5), were examined as membrane potential probes in cytochrome c oxidase vesicles. The spectra of the vesicle-associated dyes resemble those of the same dyes in organic solvents, indicating that safranine and diSC3-5 probably dissolve in a hydrophobic region of the proteoliposomal membrane. This binding of safranine to proteoliposomes occurs with a dye-membrane dissociation constant in the micromolar range. The binding of safranine and of diSC3-5 to liposomes or proteoliposomes is accompanied by fluorescence enhancement. This enhanced fluorescence is quenched by respiration or by the establishment of a K+ diffusion potential by valinomycin (negative interior). An optimal dye/lipid ratio was required to secure maximum fluorescence quenching of the dyes, whether that quenching was active or passive. Calibrations of both the safranine and the diSC3-5 responses with K+ diffusion potentials were also affected by the dye/lipid ratio. At lower dye/lipid ratios, the calibration curve was linear at higher potentials but deviated from linearity at lower potentials. The converse was true at higher dye/lipid ratios. The non-linearity of the calibration curve at higher potential was attributed to a 'saturation' effect; it may also involve increased permeability of proteoliposomal membrane to protons. Destacking of dye at the lower dye/lipid ratio was probably responsible for the non-linearity of the calibration curves at lower potentials. When all these effects are taken into account, the steady-state value of delta psi generated during maximal proteoliposomal respiration was calculated to be between 140 and 160 mV (interior negative) when measured with either safranine or diSC3-5. We conclude that quantitative estimates of delta psi values can be made using these probes in cytochrome c oxidase reconstituted proteoliposomes provided that appropriate precautions are taken.
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Lipophilic probes rule out a significant membrane potential in mitochondria. Trends Biochem Sci 1985. [DOI: 10.1016/0968-0004(85)90233-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Abstract
The accompanying communication [Eur. J. Biochem. 141 (1984) 1-4] indicates that the microinjection of the pH fluorescent indicator pyranine (8-hydroxy-1,2,6- pyrenesulfonate ) into giant mitochondria or mitoplasts does not affect their ability to carry out oxidative phosphorylation. The dye can therefore be used as a quantitative indicator of internal mitochondrial pH. We found that activation of metabolism in rotenone-inhibited giant mitochondria by the addition of succinate produces an internal pH change corresponding to a pH shift of 0.3 to the alkaline range, approximately the same value found previously for conventional rat liver mitochondria.
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AZZONE GIOVANNIFELICE, PIETROBON DANIELA, ZORATTI MARIO. Determination of the Proton Electrochemical Gradient across Biological Membranes. CURRENT TOPICS IN BIOENERGETICS 1984. [DOI: 10.1016/b978-0-12-152513-2.50008-8] [Citation(s) in RCA: 103] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Abstract
The influx of K+ into swollen mitochondria in the presence of valinomycin results in the synthesis of adenosine triphosphate in which approximately one H+ disappears per adenosine triphosphate synthesized. The synthesis is blocked by atractyloside but is insensitive to oligomycin and relatively insensitive to uncouplers.
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Abstract
The present paper has reviewed several factors related to ion transport and examined the properties of cation transport in mitochondria. The analysis suggests that: (1) The concept that a metabolically dependent electrical potential across the mitochondrial membrane plays a role in determining ion fluxes and steady-state concentrations is not justified and the data indicate that such exchanges are generally electroneutral. (2) Generally, the influx and efflux of an ion proceed by the same mechanism with at least one exception. (3) There are indications that some of the steps in transport are common to several cations. (4) The idea that carrier or ionophoric molecules are involved in cation transport has been examined in some detail together with the possible involvement of some known mitochondrial components. In particular, a model has been introduced in which local charge imbalances produced by H+ fluxes serve as the driving force of transport. The molecules of the complex are arranged in series in a tripartite arrangement including a filter or gate, a nonselective channel and an H+-transferring portion linked to either electron transport or the ATPase. Parts of this model have been introduced by other investigators. Models in which different portions of channels have differing functions have been proposed previously for other transport systems.
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Freedman JC, Laris PC. Electrophysiology of cells and organelles: studies with optical potentiometric indicators. INTERNATIONAL REVIEW OF CYTOLOGY. SUPPLEMENT 1981; 12:177-246. [PMID: 7019119 DOI: 10.1016/b978-0-12-364373-5.50015-9] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
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Holian A, Wilson DF. Relationship of transmembrane pH and electrical gradients with respiration and adenosine 5'-triphosphate synthesis in mitochondria. Biochemistry 1980; 19:4213-21. [PMID: 7417402 DOI: 10.1021/bi00559a012] [Citation(s) in RCA: 67] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
The mechanism of mitochondrial oxidative phosphorylation and its regulation have been studied by using suspensions of isolated rat liver mitochondria. Parallel measurements were made of mitochondrial volume, respiration, transmembrane pH and electrical gradients, and adenosine 5'-triphosphate (ATP), adenosine 5'-diphosphate (ADP), and inorganic phosphate (Pi) concentrations under various experimental conditions. The transmembrane electrical gradients were calculated from the equilibrium distributions of [3H]-triphenymethylphosphonium (TPMP+), [3H]tribenzylmethylammonium (TBMA+), and K+ (plus valinomycin). The transmembrane distributions of labeled acetate, methylamine, and 5,5-dimethyloxazolidine-2,4-dione were used for the calculation of pH gradients. Evaluation of the data shows that the respiratory rate is strictly correlated with [ATP]/([ADP][Pi]) (free energy of ATP synthesis), whereas there is no consistent correlation between the transmembrane electrical potential, the pH gradient, or the total "protonmotive force" (delta muH+) and the respiratory rate. Thermodynamic analysis indicates that, in order for the proton electrochemical gradient to serve as an intermediate in ATP synthesis, from three to seven H+ would have to be transported per each ATP synthesized, depending on the experimental conditions. These results suggest that the proton electrochemical gradient may not serve as a primary intermediate in oxidative phosphorylation.
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Decker S, Lang D. Membrane bioenergetic parameters in uncoupler-resistant mutants of Bacillus megaterium. J Biol Chem 1978. [DOI: 10.1016/s0021-9258(17)37980-2] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
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Kinnally KW, Tedeschi H. Metabolic effects of some electrofluorimetric dyes. BIOCHIMICA ET BIOPHYSICA ACTA 1978; 503:380-8. [PMID: 687611 DOI: 10.1016/0005-2728(78)90195-0] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
The effect of five electrofluorimetric dyes on mitochondrial metabolism was examined to determine their suitability for mitochondrial studies and other biological uses. The dyes merocyanine 540, 8-anilino-1-naphthalene sulfonic acid and bis(1,3-dibutyl barbituric acid-(5))-pentamethane oxonol were found to be inhibitors of the respiratory chain. However, the first two exerted their effect only at high concentrations. 3.3'-Dihexyl-2,2'-oxacarbocyanine was found to act as an uncoupler. 3,3'-Dipropyl-thiocarbocyanine inhibited beta-hydroxybutyrate respiration while dissociating succinate supported respiration from the phosphorylation of ADP. Merocyanine 540 and 8-anilino-1-naphthalene sulfonic acid may be the best suited for studies of membrane potentials in mitochondria since their effect on metabolism is negligible
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Shamoo AE, Goldstein DA. Isolation of ionophores from ion transport systems and their role in energy transduction. BIOCHIMICA ET BIOPHYSICA ACTA 1977; 472:13-53. [PMID: 141944 DOI: 10.1016/0304-4157(77)90013-2] [Citation(s) in RCA: 76] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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