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Tsylents U, Burmistrz M, Wojciechowska M, Stępień J, Maj P, Trylska J. Iron uptake pathway of Escherichia coli as an entry route for peptide nucleic acids conjugated with a siderophore mimic. Front Microbiol 2024; 15:1331021. [PMID: 38357356 PMCID: PMC10864483 DOI: 10.3389/fmicb.2024.1331021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Accepted: 01/09/2024] [Indexed: 02/16/2024] Open
Abstract
Bacteria secrete various iron-chelators (siderophores), which scavenge Fe3+ from the environment, bind it with high affinity, and retrieve it inside the cell. After the Fe3+ uptake, bacteria extract the soluble iron(II) from the siderophore. Ferric siderophores are transported inside the cell via the TonB-dependent receptor system. Importantly, siderophore uptake paths have been also used by sideromycins, natural antibiotics. Our goal is to hijack the transport system for hydroxamate-type siderophores to deliver peptide nucleic acid oligomers into Escherichia coli cells. As siderophore mimics we designed and synthesized linear and cyclic Nδ-acetyl-Nδ-hydroxy-l-ornithine based peptides. Using circular dichroism spectroscopy, we found that iron(III) is coordinated by the linear trimer with hydroxamate groups but not by the cyclic peptide. The internal flexibility of the linear siderophore oxygen atoms and their interactions with Fe3+ were confirmed by all-atom molecular dynamics simulations. Using flow cytometry we found that the designed hydroxamate trimer transports PNA oligomers inside the E. coli cells. Growth recovery assays on various E. coli mutants suggest the pathway of this transport through the FhuE outer-membrane receptor, which is responsible for the uptake of the natural iron chelator, ferric-coprogen. This pathway also involves the FhuD periplasmic binding protein. Docking of the siderophores to the FhuE and FhuD receptor structures showed that binding of the hydroxamate trimer is energetically favorable corroborating the experimentally suggested uptake path. Therefore, this siderophore mimic, as well as its conjugate with PNA, is most probably internalized through the hydroxamate pathway.
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Olshvang E, Szebesczyk A, Kozłowski H, Hadar Y, Gumienna-Kontecka E, Shanzer A. Biomimetic ferrichrome: structural motifs for switching between narrow- and broad-spectrum activities in P. putida and E. coli. Dalton Trans 2015; 44:20850-8. [DOI: 10.1039/c5dt02685g] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Mimics with ferrichrome-like activity allowed the formulation of guidelines for broad-spectrum active compounds. Deviation from these guidelines provided narrow-spectrum active compounds.
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Affiliation(s)
- Evgenia Olshvang
- Department of Organic Chemistry
- The Weizmann Institute of Science
- Rehovot 76100
- Israel
| | | | | | - Yitzhak Hadar
- Department of Plant Pathology and Microbiology
- The R.H. Smith Faculty of Agriculture Food and Environment
- The Hebrew University of Jerusalem
- Rehovot 76100
- Israel
| | | | - Abraham Shanzer
- Department of Organic Chemistry
- The Weizmann Institute of Science
- Rehovot 76100
- Israel
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Schalk IJ, Mislin GLA, Brillet K. Structure, function and binding selectivity and stereoselectivity of siderophore-iron outer membrane transporters. CURRENT TOPICS IN MEMBRANES 2012; 69:37-66. [PMID: 23046646 DOI: 10.1016/b978-0-12-394390-3.00002-1] [Citation(s) in RCA: 86] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
Abstract
To get access to iron, microorganisms produce and release into their environment small organic metal chelators called siderophores. In parallel, they produce siderophore-iron outer membrane transporters (also called TonB-Dependent Transporters or TBDT) embedded in the outer membrane; these proteins actively reabsorb the siderophore loaded with iron from the extracellular medium. This active uptake requires energy in the form of the proton motive force transferred from the inner membrane to the outer membrane transporter via the inner membrane TonB complex. Siderophores produced by microorganisms are structurally very diverse with molecular weights of 150 up to 2000Da. Siderophore-iron uptake from the extracellular medium by TBDTs is a highly selective and sometimes even stereoselective process, with each siderophore having a specific TBDT. Unlike the siderophores, all TBDTs have similar structures and belong to the outer membrane β-barrel protein superfamily. The way in which the siderophore-iron complex passes through the TBDT is still unclear. In some bacteria, TBDTs are also partners of signaling cascades regulating the expression of proteins involved in siderophore biosynthesis and siderophore-iron acquisition.
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Affiliation(s)
- Isabelle J Schalk
- UMR 7242, Université de Strasbourg-CNRS, ESBS, Boulevard Sébastien Brant, Strasbourg, France.
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Brillet K, Reimmann C, Mislin GLA, Noël S, Rognan D, Schalk IJ, Cobessi D. Pyochelin enantiomers and their outer-membrane siderophore transporters in fluorescent pseudomonads: structural bases for unique enantiospecific recognition. J Am Chem Soc 2011; 133:16503-9. [PMID: 21902256 DOI: 10.1021/ja205504z] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Pyochelin (Pch) and enantiopyochelin (EPch) are enantiomeric siderophores, with three chiral centers, produced under iron limitation conditions by Pseudomonas aeruginosa and Pseudomonas fluorescens , respectively. After iron chelation in the extracellular medium, Pch-Fe and EPch-Fe are recognized and transported by their specific outer-membrane transporters: FptA in P. aeruginosa and FetA in P. fluorescens . Structural analysis of FetA-EPch-Fe and FptA-Pch-Fe, combined with mutagenesis and docking studies revealed the structural basis of the stereospecific recognition of these enantiomers by their respective transporters. Whereas FetA and FptA have a low sequence identity but high structural homology, the Pch and EPch binding pockets do not share any structural homology, but display similar physicochemical properties. The stereospecific recognition of both enantiomers by their corresponding transporters is imposed by the configuration of the siderophore's C4'' and C2'' chiral centers. This recognition involves specific hydrogen bonds between the Arg91 guanidinium group and EPch-Fe for FetA and between the Leu117-Leu116 main chain and Pch-Fe for FptA. FetA and FptA are the first membrane receptors to be structurally described with opposite binding enantioselectivities for their ligands, giving insights into the structural basis of their enantiospecificity.
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Affiliation(s)
- Karl Brillet
- UMR 7242 Biotechnologie et Signalisation Cellulaire, Université de Strasbourg-CNRS, Irebs-ESBS, Boulevard Sébastien Brant, 67412 Illkirch, France
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Hoegy F, Lee X, Noel S, Rognan D, Mislin GLA, Reimmann C, Schalk IJ. Stereospecificity of the siderophore pyochelin outer membrane transporters in fluorescent pseudomonads. J Biol Chem 2009; 284:14949-57. [PMID: 19297329 DOI: 10.1074/jbc.m900606200] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
Pyochelin (Pch) and enantio-pyochelin (EPch) are enantiomer siderophores that are produced by Pseudomonas aeruginosa and Pseudomonas fluorescens, respectively, under iron limitation. Pch promotes growth of P. aeruginosa when iron is scarce, and EPch carries out the same biological function in P. fluorescens. However, the two siderophores are unable to promote growth in the heterologous species, indicating that siderophore-mediated iron uptake is highly stereospecific. In the present work, using binding and iron uptake assays, we found that FptA, the Fe-Pch outer membrane transporter of P. aeruginosa, recognized (K(d) = 2.5 +/- 1.1 nm) and transported Fe-Pch but did not interact with Fe-EPch. Likewise, FetA, the Fe-EPch receptor of P. fluorescens, was specific for Fe-EPch (K(d) = 3.7 +/- 2.1 nm) but did not bind and transport Fe-Pch. Growth promotion experiments performed under iron-limiting conditions confirmed that FptA and FetA are highly specific for Pch and EPch, respectively. When fptA and fetA along with adjacent transport genes involved in siderophore uptake were swapped between the two bacterial species, P. aeruginosa became able to utilize Fe-EPch as an iron source, and P. fluorescens was able to grow with Fe-Pch. Docking experiments using the FptA structure and binding assays showed that the stereospecificity of Pch recognition by FptA was mostly due to the configuration of the siderophore chiral centers C4'' and C2'' and was only weakly dependent on the configuration of the C4' carbon atom. Together, these findings increase our understanding of the stereospecific interaction between Pch and its outer membrane receptor FptA.
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Affiliation(s)
- Françoise Hoegy
- Métaux et Microorganismes, Chimie, Biologie, et Applications, CNRS-Université de Strasbourg, Ecole Superieure de Biotechnologie Strasbourg, Boulevard Sébastien Brant, F-67413 Illkirch, Strasbourg, France
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Crumbliss AL, Harrington JM. Iron sequestration by small molecules: Thermodynamic and kinetic studies of natural siderophores and synthetic model compounds. ADVANCES IN INORGANIC CHEMISTRY 2009. [DOI: 10.1016/s0898-8838(09)00204-9] [Citation(s) in RCA: 76] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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Abstract
High-affinity iron acquisition is mediated by siderophore-dependent pathways in the majority of pathogenic and nonpathogenic bacteria and fungi. Considerable progress has been made in characterizing and understanding mechanisms of siderophore synthesis, secretion, iron scavenging, and siderophore-delivered iron uptake and its release. The regulation of siderophore pathways reveals multilayer networks at the transcriptional and posttranscriptional levels. Due to the key role of many siderophores during virulence, coevolution led to sophisticated strategies of siderophore neutralization by mammals and (re)utilization by bacterial pathogens. Surprisingly, hosts also developed essential siderophore-based iron delivery and cell conversion pathways, which are of interest for diagnostic and therapeutic studies. In the last decades, natural and synthetic compounds have gained attention as potential therapeutics for iron-dependent treatment of infections and further diseases. Promising results for pathogen inhibition were obtained with various siderophore-antibiotic conjugates acting as "Trojan horse" toxins and siderophore pathway inhibitors. In this article, general aspects of siderophore-mediated iron acquisition, recent findings regarding iron-related pathogen-host interactions, and current strategies for iron-dependent pathogen control will be reviewed. Further concepts including the inhibition of novel siderophore pathway targets are discussed.
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Affiliation(s)
- Marcus Miethke
- Philipps Universität Marburg, FB Chemie Biochemie, Hans Meerwein Strasse, D-35032 Marburg, Germany
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Youard ZA, Mislin GLA, Majcherczyk PA, Schalk IJ, Reimmann C. Pseudomonas fluorescens CHA0 produces enantio-pyochelin, the optical antipode of the Pseudomonas aeruginosa siderophore pyochelin. J Biol Chem 2007; 282:35546-53. [PMID: 17938167 DOI: 10.1074/jbc.m707039200] [Citation(s) in RCA: 89] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
The siderophore pyochelin is made by a thiotemplate mechanism from salicylate and two molecules of cysteine. In Pseudomonas aeruginosa, the first cysteine residue is converted to its D-isoform during thiazoline ring formation whereas the second cysteine remains in its L-configuration, thus determining the stereochemistry of the two interconvertible pyochelin diastereoisomers as 4'R, 2''R, 4''R (pyochelin I) and 4'R, 2''S, 4''R (pyochelin II). Pseudomonas fluorescens CHA0 was found to make a different stereoisomeric mixture, which promoted growth under iron limitation in strain CHA0 and induced the expression of its biosynthetic genes, but was not recognized as a siderophore and signaling molecule by P. aeruginosa. Reciprocally, pyochelin promoted growth and induced pyochelin gene expression in P. aeruginosa, but was not functional in P. fluorescens. The structure of the CHA0 siderophore was determined by mass spectrometry, thin-layer chromatography, NMR, polarimetry, and chiral HPLC as enantio-pyochelin, the optical antipode of the P. aeruginosa siderophore pyochelin. Enantio-pyochelin was chemically synthesized and confirmed to be active in CHA0. Its potential biosynthetic pathway in CHA0 is discussed.
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Affiliation(s)
- Zeb A Youard
- Département de Microbiologie Fondamentale, Université de Lausanne, Bâtiment Biophore, Quartier UNIL-Sorge, CH-1015 Lausanne, Suisse
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Deml G, Voges K, Jung G, Winkelmann G. Tetraglycylferrichrome - the first heptapeptide ferrichrome. FEBS Lett 2001. [DOI: 10.1016/0014-5793(84)81016-9] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Heymann P, Ernst JF, Winkelmann G. Identification and substrate specificity of a ferrichrome-type siderophore transporter (Arn1p) in Saccharomyces cerevisiae. FEMS Microbiol Lett 2000; 186:221-7. [PMID: 10802175 DOI: 10.1111/j.1574-6968.2000.tb09108.x] [Citation(s) in RCA: 85] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
Abstract
Genes encoding transporters for heterologous siderophores have been identified in Saccharomyces cerevisiae, of which SIT1, TAF1, and ENB1 encode the transporters for ferrioxamines, ferric triacetylfusarinine C and ferric enterobactin, respectively. In the present communication we have shown that a further gene encoding a member of the major facilitator superfamily, ARN1 (YHL040c), is involved in the transport of a specific class of ferrichromes, possessing anhydromevalonyl residues linked to N(delta)-ornithine (ARN). Ferrirubin and ferrirhodin, which both are produced by filamentous fungi, are the most common representatives of this class of ferrichromes. A strain possessing a disruption in the ARN1 gene was unable to transport ferrirubin, ferrirhodin and also ferrichrome A, indicating that the encoded transporter recognizes anhydromevalonyl and the structurally-related methylglutaconyl side-chains surrounding the iron center. Ferrichromes possessing short-chain ornithine-N(delta)-acetyl residues such as ferrichrome, ferricrocin and ferrichrysin, were excluded by the Arn1 transporter. Substitution of the iron-surrounding N-acyl chains of ferrichromes by propionyl residues had no effect, whereas substitution by butyryl residues led to recognition by the Arn1 transporter. This would indicate that a chain length of four C-atoms is sufficient to allow binding. Using different asperchromes (B1, D1) we also found that a minimal number of two anhydromevalonyl residues is sufficient for recognition by Arn1p. Contrary to the iron-surrounding N-acyl residues, the peptide backbone of ferrichromes was not an important determinant for the Arn1 transporter.
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Affiliation(s)
- P Heymann
- Institut für Mikrobiologie and Biotechnologie, Universität Tübingen, Auf der Morgenstelle 28, D-72076, Tübingen, Germany
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Ardon O, Weizman H, Libman J, Shanzer A, Chen Y, Hadar Y. Iron uptake in Ustilago maydis: studies with fluorescent ferrichrome analogues. Microbiology (Reading) 1997; 143:3625-3631. [DOI: 10.1099/00221287-143-11-3625] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Iron uptake by the phytopathogenic fungus Ustilago maydis was studied using synthetic biomimetic ferrichrome analogues and their fluorescently labelled derivatives as structural and dynamic probes, respectively. The use of structurally distinct analogues enabled determination of the structural requirements for recognition by the fungal iron-uptake system. The application of fluorescently labelled derivatives which convert from a non-fluorescent to a fluorescent state upon iron (III) release enabled monitoring of iron uptake in real time both fluorimetrically and microscopically. Different rates of 55Fe uptake were found for two structurally distinct synthetic analogues, B9 and B5, which differ in their amino acid building blocks. B9 mediated uptake of 55Fe at a higher rate than B5. The behaviour of the fluorescent derivatives B9-Ant (anthracene-labelled B9) and B5-Ant (anthracene-labelled B5) paralleled that of their non-labelled precursors. Exposure of fungal cells to B9-Ant led to a higher increase of fluorescence in the medium than exposure to B5-Ant, indicating a more effective iron uptake from B9-Ant. By using fluorescence microscopy it was possible to trace the label of B9-Ant. Fluorescence was localized in regularly shaped vesicles in the treated cells. The rate of fluorescence appearance within the cells lagged behind the rate of iron uptake, suggesting use of the siderophores for iron storage.
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Affiliation(s)
- Orly Ardon
- Department of Plant Pathology and Microbiology and The Otto Warburg Center for Agricultural Biotechnology, The Hebrew University of Jerusalem, Faculty of Agricultural, Food and Environmental Quality Sciences,Rehovot 76100,Israel
| | - Haim Weizman
- Department of Organic Chemistry, The Weizmann Institute of Science,Rehovot 76100,Israel
| | - Jacqueline Libman
- Department of Organic Chemistry, The Weizmann Institute of Science,Rehovot 76100,Israel
| | - Abraham Shanzer
- Department of Organic Chemistry, The Weizmann Institute of Science,Rehovot 76100,Israel
| | - Yona Chen
- Department of Soil and Water Sciences, The Hebrew University of Jerusalem, Faculty of Agricultural, Food and Environmental Quality Sciences,Rehovot 76100,Israel
| | - Yitzhak Hadar
- Department of Soil and Water Sciences, The Hebrew University of Jerusalem, Faculty of Agricultural, Food and Environmental Quality Sciences,Rehovot 76100,Israel
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Weizman H, Ardon O, Mester B, Libman J, Dwir O, Hadar Y, Chen Y, Shanzer A. Fluorescently-Labeled Ferrichrome Analogs as Probes for Receptor-Mediated, Microbial Iron Uptake. J Am Chem Soc 1996. [DOI: 10.1021/ja9610646] [Citation(s) in RCA: 152] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Haim Weizman
- Contribution from the Department of Organic Chemistry, The Weizmann Institute of Science, and Department of Plant Pathology and Microbiology, The Hebrew University of Jerusalem, Faculty of Agriculture, Rehovot, 76100, Israel
| | - Orly Ardon
- Contribution from the Department of Organic Chemistry, The Weizmann Institute of Science, and Department of Plant Pathology and Microbiology, The Hebrew University of Jerusalem, Faculty of Agriculture, Rehovot, 76100, Israel
| | - Brenda Mester
- Contribution from the Department of Organic Chemistry, The Weizmann Institute of Science, and Department of Plant Pathology and Microbiology, The Hebrew University of Jerusalem, Faculty of Agriculture, Rehovot, 76100, Israel
| | - Jacqueline Libman
- Contribution from the Department of Organic Chemistry, The Weizmann Institute of Science, and Department of Plant Pathology and Microbiology, The Hebrew University of Jerusalem, Faculty of Agriculture, Rehovot, 76100, Israel
| | - Oren Dwir
- Contribution from the Department of Organic Chemistry, The Weizmann Institute of Science, and Department of Plant Pathology and Microbiology, The Hebrew University of Jerusalem, Faculty of Agriculture, Rehovot, 76100, Israel
| | - Yitzhak Hadar
- Contribution from the Department of Organic Chemistry, The Weizmann Institute of Science, and Department of Plant Pathology and Microbiology, The Hebrew University of Jerusalem, Faculty of Agriculture, Rehovot, 76100, Israel
| | - Yona Chen
- Contribution from the Department of Organic Chemistry, The Weizmann Institute of Science, and Department of Plant Pathology and Microbiology, The Hebrew University of Jerusalem, Faculty of Agriculture, Rehovot, 76100, Israel
| | - Abraham Shanzer
- Contribution from the Department of Organic Chemistry, The Weizmann Institute of Science, and Department of Plant Pathology and Microbiology, The Hebrew University of Jerusalem, Faculty of Agriculture, Rehovot, 76100, Israel
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Akiyama M, Hara Y, Gunji H. Artificial Siderophores as a Model for Ferrichrome. Control of theΔ- orΛ-Configuration of Iron(III) Complexes of Tripodal Hydroxamates by Linking to the C- or N-Terminus of the Same L-Alanyl-L-alanyl-β-(N-hydroxy)alanine Unit. CHEM LETT 1995. [DOI: 10.1246/cl.1995.225] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Shanzer A, Libman J, Yakirevitch P, Hadar Y, Chen Y, Jurkevitch E. Siderophore-Mediated microbial iron(III) uptake: An exercise in chiral recognition. Chirality 1993. [DOI: 10.1002/chir.530050516] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Jegorov A, Maťha V, Hušák M, Kratochvíl B, Stuchlík J, Sedmera P, Havlíček V. Iron uptake system of some members of the genus tolypocladium: crystal structure of the ligand and its iron(III) complex. ACTA ACUST UNITED AC 1993. [DOI: 10.1039/dt9930001287] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Jurkevitch E, Hadar Y, Chen Y, Libman J, Shanzer A. Iron uptake and molecular recognition in Pseudomonas putida: receptor mapping with ferrichrome and its biomimetic analogs. J Bacteriol 1992; 174:78-83. [PMID: 1309523 PMCID: PMC205679 DOI: 10.1128/jb.174.1.78-83.1992] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022] Open
Abstract
The presence of an Fe(3+)-ferrichrome uptake system in fluorescent Pseudomonas spp. was demonstrated, and its structural requirements were mapped in Pseudomonas putida with the help of biomimetic ferrichrome analogs. Growth tests, 55Fe3+ uptake, and competition experiments demonstrated that the synthetic L-alanine derivative B5 inhibits the action of ferrichrome but does not facilitate Fe3+ transport, while the enantiomeric D-Ala derivative B6 fails to compete with ferrichrome. Contraction of the molecule's envelope by replacing L-Ala by glycine provided a synthetic carrier, B9, which fully simulates ferrichrome as a growth promoter. Sodium azide inhibited 55Fe3+ uptake of the Gly derivative B9, suggesting an active transport process. These data demonstrate the chiral discrimination of the ferrichrome receptor and its sensitivity to subtle structural changes. They further confirm that receptor binding is a necessary but not sufficient condition for Fe3+ uptake to occur and suggest that binding to the receptor and transport proteins might rely on different recognition patterns.
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Affiliation(s)
- E Jurkevitch
- Department of Microbiology and Plant Pathology, Faculty of Agriculture, Hebrew University of Jerusalem, Rehovot, Israel
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Bergeron RJ, Weimar WR. Kinetics of iron acquisition from ferric siderophores by Paracoccus denitrificans. J Bacteriol 1990; 172:2650-7. [PMID: 2185228 PMCID: PMC208909 DOI: 10.1128/jb.172.5.2650-2657.1990] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
The kinetics of iron accumulation by iron-starved Paracoccus denitrificans during the first 2 min of exposure to 55Fe-labeled ferric siderophore chelates is described. Iron is acquired from the ferric chelate of the natural siderophore L-parabactin in a process exhibiting biphastic kinetics by Lineweaver-Burk analysis. The kinetic data for 1 microM less than [Fe L-parabactin] less than 10 microM fit a regression line which suggests a low-affinity system (Km = 3.9 +/- 1.2 microM, Vmax = 494 pg-atoms of 55Fe min-1 mg of protein-1), whereas the data for 0.1 microM less than or equal to [Fe L-parabactin] less than or equal to 1 microM fit another line consistent with a high-affinity system (Km = 0.24 +/- 0.06 microM, Vmax = 108 pg-atoms of 55Fe min-1 mg of protein-1). The Km of the high-affinity uptake is comparable to the binding affinity we had previously reported for the purified ferric L-parabactin receptor protein in the outer membrane. In marked contrast, ferric D-parabactin data fit a single regression line corresponding to a simple Michaelis-Menten process with comparatively low affinity (Km = 3.1 +/- 0.9 microM, Vmax = 125 pg-atoms of 55Fe min-1 mg of protein-1). Other catecholamide siderophores with an intact oxazoline ring derived from L-threonine (L-homoparabactin, L-agrobactin, and L-vibriobactin) also exhibit biphasic kinetics with a high-affinity component similar to ferric L-parabactin. Circular dichroism confirmed that these ferric chelates, like ferric L-parabactin, exist as the lambda enantiomers. The A forms ferric parabactin (ferrin D- and L-parabactin A), in which the oxazoline ring is hydrolyzed to the open-chain threonyl structure, exhibit linear kinetics with a comparatively high Km (1.4 +/- 0.3 microM) and high Vmax (324 pg-atoms of 55Fe min-1 of protein-1). Furthermore, the marked stereospecificity seen between ferric D- and L-parabactins is absent; i.e., iron acquisition from ferric parabactin A is non stereospecific. The mechanistic implications of these findings in relation to a stereospecific high-affinity binding followed by a nonstereospecific postreceptor processing is discussed.
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Affiliation(s)
- R J Bergeron
- Department of Medicinal Chemistry, J. Hillis Miller Health Center, University of Florida, Gainesville 32610-0485
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Abstract
A variety of fungi are known to overproduce and excrete desferri-siderophores under iron limitation. After complexing with ferric iron, octahedral complexes are formed and taken up by siderophore-specific transport systems. These systems represent energy consuming systems as inferred from their sensitivity to respiratory inhibitors, uncouplers and changes of the membrane potential and are able to recognize structure and stereochemical configuration of the various siderophore molecules. Ferrichromes, the most common siderophores in fungi, are generally recognized as Lambda-cis coordination complexes. Triacetylfusarinins, although prevailing as Delta-cis optical isomers in aqueous solution, are assumed to be taken up after isomerization to the corresponding Lambda-cis complexes. However, coprogens which also show a predominant Delta-absolute configuration in solution seem to be transported without prior isomerization. When both, ferrichromes as well as triacetylfusarines or coprogens are taken up, competition during uptake is observed, suggesting the presence of a common transport system during translocation of siderophores across the fungal plasma membrane.
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Affiliation(s)
- G Winkelmann
- Department of Microbiology and Biotechnology, University of Tübingen, FRG
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Huschka HG, Winkelmann G. Iron limitation and its effect on membrane proteins and siderophore transport in Neurospora crassa. BIOLOGY OF METALS 1989; 2:108-13. [PMID: 2534965 DOI: 10.1007/bf01129209] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Cells of the fungus Neurospora crassa were grown under iron-deficient and iron-sufficient conditions and their plasma membrane proteins were compared. Three strains were studied: N. crassa 74A (wild type), a siderophore-free mutant N. crassa (arg-5 ota aga) as well as a 'slime' variant of N. crassa which lacks a cell wall. Plasma membranes were purified, solubilized and analyzed by one-dimensional SDS/polyacrylamide gel electrophoresis yielding approximately 50 distinct protein bands with molecular masses in the range 14-160 kDa. Iron-sufficient and iron-deficient growth resulted in nearly identical plasma membrane protein profiles in all strains. Although minor alterations in the proportion of certain proteins could be detected, significant overproduction of certain membrane proteins during iron limitation could not be observed. Transport of 55Fe-labeled siderophores seems to be correlated to the degree of iron limitation. For example, transport rates were enhanced fivefold after 16 h of growth in iron-deficient medium compared to growth in iron-sufficient medium. Extraction and HPLC measurement of siderophores from conidiospores yielded approximately 10(-15) mol/spore, indicating that germination tubes and young cells used for transport measurements are not iron-deficient. It is suggested that the putative transport systems for siderophores in fungal plasma membranes are constitutively expressed and enhanced uptake of siderophores during iron limitation is rather the result of cellular transport regulation mechanisms.
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Affiliation(s)
- H G Huschka
- Institut Biologie I, Universität Tübingen, Federal Republic of Germany
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Matzanke BF, Bill E, Müller GI, Trautwein AX, Winkelmann G. Metabolic utilization of 57Fe-labeled coprogen in Neurospora crassa. An in vivo Mössbauer study. EUROPEAN JOURNAL OF BIOCHEMISTRY 1987; 162:643-50. [PMID: 2951253 DOI: 10.1111/j.1432-1033.1987.tb10686.x] [Citation(s) in RCA: 28] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Mössbauer spectra of whole cells of Neurospora crassa arg-5 ota aga (a siderophore-free mutant) show that the siderophore coprogen is accumulated inside the cell as an entity. 57Fe from 57Fe-labeled coprogen is slowly removed from the complex (45% in 27 h). The rate of removal depends on the degree of iron starvation of the cells. The distribution of 55Fe from [55Fe]coprogen in vacuoles, membranes, and cytoplasm has been also determined. From this it is clear that coprogen is accumulated in the cytoplasm. In addition to its role as a siderophore, coprogen serves as an iron-storage compound. No holoferritins could be detected. We therefore conclude that this type of iron-storage protein is lacking in N. crassa. Metabolized iron was found predominantly to exist as an envelope of Fe(II) high-spin (delta = 1.2-1.3 mm s-1; delta EQ = 3.0-3.1 mm s-1 at 4.2 K) and fast-relaxing Fe(III) high-spin species (delta approximately equal to 0.25 mm s-1 and 0.45 mm s-1; delta EQ approximately equal to 0.6 mm s-1 and 0.55 mm s-1, respectively, at 4.2 K). An assignment of these major iron metabolites is difficult. The Mössbauer data of the Fe(II) species do not fit those reported for heme, cytochromes and ferredoxins. We therefore assume that this iron metabolite represents a novel internal iron compound. One of the Fe(III) species becomes the dominant component of the cell spectra after 65 h of metabolization and might correspond to an iron-storage compound with iron oxide cores similar to bacterioferritin. After 27 h of growth in mycelia supplied with 57Fe-labeled coprogen, the siderophore ferricrocin was observed in the cell spectra. This is unexpected, since N. crassa arg-5 ota aga is unable to synthesize ornithine. We assume that ferricrocin is synthesized by the use of coprogen degradation products.
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Braun V, Winkelmann G. Microbial Iron Transport Structure and Function of Siderophores. ACTA ACUST UNITED AC 1987. [DOI: 10.1007/978-3-642-72902-7_4] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2023]
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Transport properties of N-acyl derivatives of the coprogen and ferrichrysin classes of siderophores inNeurospora crassa. Arch Microbiol 1986. [DOI: 10.1007/bf00690156] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Huschka HG, Jalal MA, van der Helm D, Winkelmann G. Molecular recognition of siderophores in fungi: role of iron-surrounding N-acyl residues and the peptide backbone during membrane transport in Neurospora crassa. J Bacteriol 1986; 167:1020-4. [PMID: 2943724 PMCID: PMC215975 DOI: 10.1128/jb.167.3.1020-1024.1986] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
Recognition of ferric siderophores in Neurospora crassa was found to depend on the number and kind of N-acyl residues that surrounded the iron coordination center. In the coprogen series, uptake decreased in the order of coprogen, neocoprogen I, and neocoprogen II, indicating that gradual replacement of the N-transanhydromevalonyl groups by N-acetyl groups had an adverse effect on uptake. The reverse effect was observed in the ferrichrome series, where uptake decreased in the order of ferrichrysin, asperchrome D1, asperchrome B1, and ferrirubin. Configuration of the anhydromevalonyl group (cis or trans) in ferrichromes was also an important determinant in the recognition process. On the basis of uptake and inhibition studies, it is proposed that in ferrichromes part of the molecule (iron configuration and the N-acyl groups) is responsible for binding, whereas another (cyclic peptide ring) is involved in the subsequent process of transport.
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Chung TD, Matzanke BF, Winkelmann G, Raymond KN. Inhibitory effect of the partially resolved coordination isomers of chromic desferricoprogen on coprogen uptake in Neurospora crassa. J Bacteriol 1986; 165:283-7. [PMID: 2934378 PMCID: PMC214401 DOI: 10.1128/jb.165.1.283-287.1986] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
Two partially resolved chromatographic fractions of geometrical and optical isomers of the chromic complexes of desferricoprogen, a siderophore from Neurospora crassa, were obtained from high-pressure liquid chromatography on a reverse-phase matrix. The first fraction was identified as a cis complex with a 20% diastereomeric excess of the lambda isomer. The second fraction was identified as a mixture of several of the possible trans isomers with a net 20% diastereomeric excess of the delta isomers. These fractions were used to evaluate the stereospecificity of the coprogen-mediated iron uptake system with respect to the metal coordination center. Fraction II competitively inhibited coprogen uptake, whereas fraction I showed only slight inhibition. N. crassa accumulated chromium from fraction II faster than the rate of chromium uptake from fraction I. Neither fraction had a significant effect on the uptake of ferricrocin, suggesting that coprogen and ferricrocin are taken up by different receptor systems.
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Stereospecificity of siderophore-mediated iron uptake in Rhodotorula pilimanae as probed by enantiorhodotorulic acid and isomers of chromic rhodotorulate. J Biol Chem 1985. [DOI: 10.1016/s0021-9258(17)38664-7] [Citation(s) in RCA: 36] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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Mechanism and stereospecificity of the parabactin-mediated iron-transport system in Paracoccus denitrificans. J Biol Chem 1985. [DOI: 10.1016/s0021-9258(17)39542-x] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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Evidence for a common siderophore transport system but different siderophore receptors in Neurospora crassa. J Bacteriol 1985; 162:715-21. [PMID: 2985545 PMCID: PMC218909 DOI: 10.1128/jb.162.2.715-721.1985] [Citation(s) in RCA: 54] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
Uptake and competition experiments were performed with Neurospora crassa and Penicillium parvum by using 14C-labeled coprogen and 55Fe-labeled ferrichrome-type siderophores. Several siderophores of the ferrichrome family, such as ferrichrome, ferricrocin, ferrichrysin, and tetraglycyl-ferrichrome as well as the semisynthetic ferricrocin derivatives O-(phenyl-carbamoyl)-ferricrocin and O-(sulfanilyl-carbamoyl)-ferricrocin were taken up by N. crassa. The ferrichrome-type siderophores used vary in the structure of the peptide backbone but possess a common lambda-cis configuration about the iron center and three identical ornithyl-delta-N-acetyl groups as surrounding residues. This suggests that these ferrichrome-type siderophores are recognized by a common ferrichrome receptor. We also concluded that the ferrichrome receptor is lambda-cis specific from the inability to take up the synthetic enantiomers, enantio-ferrichrome and enantio-ferricrocin, possessing a delta-cis configuration about the iron center. On the other hand, we found that coprogen, possessing a delta-absolute configuration and two trans-anhydromevalonic acid residues around the metal center, was also taken up by N. crassa and was competitively inhibited by the ferrichrome-type siderophores. We therefore propose the existence of a common siderophore transport system but the presence of different siderophore receptors in N. crassa. In addition, ferrirubin, which is very slowly transported by N. crassa, inhibited both coprogen and ferrichrome-type siderophore transport. Contrary to the findings with N. crassa, transport experiments with P. parvum revealed the presence of a ferrichrome receptor but the absence of a coprogen receptor; coprogen was neither transported nor did it inhibit the ferrichrome transport.
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Müller G, Matzanke BF, Raymond KN. Iron transport in Streptomyces pilosus mediated by ferrichrome siderophores, rhodotorulic acid, and enantio-rhodotorulic acid. J Bacteriol 1984; 160:313-8. [PMID: 6480558 PMCID: PMC214718 DOI: 10.1128/jb.160.1.313-318.1984] [Citation(s) in RCA: 49] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023] Open
Abstract
Streptomyces pilosus is one of several microbes which produce ferrioxamine siderophores. In the accompanying paper (G. Müller and K. Raymond, J. Bacteriol. 160:304-312), the mechanism of iron uptake mediated by the endogenous ferrioxamines B, D1, D2, and E was examined. Here we report iron transport behavior in S. pilosus as mediated by the exogenous siderophores ferrichrome, ferrichrysin, rhodotorulic acid (RA), and synthetic enantio-RA. In each case iron acquisition depended on metabolic energy and had uptake rates comparable to that of [55Fe]ferrioxamine B. However, the synthetic ferric enantio-RA (which has the same preferred chirality at the metal center as ferrichrome) was twice as effective in supplying iron as was the natural ferric RA complex, suggesting that stereospecific recognition at the metal center is involved in the transport process. Iron uptake mediated by ferrichrome and ferric enantio-RA was strongly inhibited by kinetically inert chromic complexes of desferrioxamine B. These inhibition experiments indicate that iron from these exogenous siderophores is transported by the same uptake system as ferrioxamine B. Since the ligands have no structural similarity to ferrioxamine B except for the presence of three hydoxamate groups, we conclude that only the hydroxamate iron center and its direct surroundings are important for recognition and uptake. This hypothesis is supported by the fact that ferrichrome A and ferrirubin, which are both substituted at the hydroxamate carbonyl groups, were not (or were poorly) effective in supplying iron to S. pilosus.
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Moores JC, Magazin M, Ditta GS, Leong J. Cloning of genes involved in the biosynthesis of pseudobactin, a high-affinity iron transport agent of a plant growth-promoting Pseudomonas strain. J Bacteriol 1984; 157:53-8. [PMID: 6690426 PMCID: PMC215128 DOI: 10.1128/jb.157.1.53-58.1984] [Citation(s) in RCA: 56] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023] Open
Abstract
A gene bank of DNA from plant growth-promoting Pseudomonas sp. strain B10 was constructed using the broad host-range conjugative cosmid pLAFR1. The recombinant cosmids contained insert DNA averaging 21.5 kilobase pairs in length. Nonfluorescent mutants of Pseudomonas sp. strain B10 were obtained by mutagenesis with N-methyl-N'-nitro-N-nitrosoguanidine, ethyl methanesulfonate, or UV light and were defective in the biosynthesis of its yellow-green, fluorescent siderophore (microbial iron transport agent) pseudobactin. No yellow-green, fluorescent mutants defective in the production of pseudobactin were identified. Nonfluorescent mutants were individually complemented by mating the gene bank en masse and identifying fluorescent transconjugants. Eight recombinant cosmids were sufficient to complement 154 nonfluorescent mutants. The pattern of complementation suggests that a minimum of 12 genes arranged in four gene clusters is required for the biosynthesis of pseudobactin. This minimum number of genes seems reasonable considering the structural complexity of pseudobactin.
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Huschka HG, Müller G, Winkelmann GÃ. The membrane potential is the driving force for siderophore iron transport in fungi. FEMS Microbiol Lett 1983. [DOI: 10.1111/j.1574-6968.1983.tb00101.x] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Winkelmann GÃ, Braun V. Stereoselective recognition of ferrichrome by fungi and bacteria. FEMS Microbiol Lett 1981. [DOI: 10.1111/j.1574-6968.1981.tb06972.x] [Citation(s) in RCA: 58] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
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Neilands J, Erickson T, Rastetter W. Stereospecificity of the ferric enterobactin receptor of Escherichia coli K-12. J Biol Chem 1981. [DOI: 10.1016/s0021-9258(19)69531-1] [Citation(s) in RCA: 36] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
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Cheng S, Rakhit G, Erard F, Robbins J, Chignell C. A spin label study of the thyroid hormone-binding sites in human plasma thyroxine transport proteins. J Biol Chem 1981. [DOI: 10.1016/s0021-9258(19)70053-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
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Müller G, Winkelmann GÃ. Arsenate causes an immediate loss of bound siderophores from cytoplasmic membranes of fungi. FEMS Microbiol Lett 1980. [DOI: 10.1111/j.1574-6968.1980.tb05626.x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
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Winkelmann G. Surface iron polymers and hydroxy acids. A model of iron supply in sideramine-free fungi. Arch Microbiol 1979. [DOI: 10.1007/bf00409204] [Citation(s) in RCA: 37] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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