Ji WS, Hu JL, Qiu JW, Peng DR, Shi BL, Zhou SJ, Wu KC, Fan DM. Polymorphism of flagellin A gene in
Helicobacter pylori.
World J Gastroenterol 2001;
7:783-7. [PMID:
11854901 PMCID:
PMC4695594 DOI:
10.3748/wjg.v7.i6.783]
[Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
Abstract
AIM: To study the polymorphism of flagellin A genotype and its significance in Helicobacter pylori (H. pylori).
METHODS: As the template, genome DNA was purified from six clinical isolates of H. pylori from outpatients, and the corresponding flagellin A fragments were amplified by polymerase chain reaction. All these products were sequenced. These sequences were compared with each other, and analyzed by software of FASTA program.
RESULTS: Specific PCR products were amplified from all of these H. pylori isolates and no length divergence was found among them. Compared with each other, the highest ungapped identity is 99.10%, while the lowest is 94.65%. Using FASTA program, the alignments between query and library sequences derived from different H. pylori strains were higher than 90%.
CONCLUSION: The nucleotide sequence of flagellin A in H. pylori is highly conservative with incident divergence. This information may be useful for gene diagnosis and further study on flagellar antigen phenotype.
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