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Dankers C, Tadros J, Harman DG, Aldrich-Wright JR, Nguyen TV, Gordon CP. Immobilized Carbodiimide Assisted Flow Combinatorial Protocol to Facilitate Amide Coupling and Lactamization. ACS COMBINATORIAL SCIENCE 2020; 22:255-267. [PMID: 32283009 DOI: 10.1021/acscombsci.0c00001] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Through a screen of over one hundred and 30 permutations of reaction temperatures, solvents, carbodiimide resins, and carbodiimide molar equivalences, in the presence, absence, or combination of diisopropylamine and benzotriazole additives, a convenient and first reported carbodiimide polymer-assisted flow approach to effect amide coupling and lactamization was developed. The protocol entails injecting a single solution (1:9 dimethylformamide: dichloromethane) containing a carboxylic acid and an amine or linear peptide sequence into a continuous stream of dichloromethane. The protocol remained viable in the absence of base, did not require carboxylate preactivation which, and in concert with minimal workup requirements, enabled the isolation of products in high yields. Compared to the utilization of untethered carbodiimide reagents, the flow procedure was also observed to provide a degree of racemization safety.
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Affiliation(s)
- Christian Dankers
- School of Science, Western Sydney University, Locked Bag, Penrith South DC, Sydney, New South Wales 1797, Australia
| | - Joseph Tadros
- School of Science, Western Sydney University, Locked Bag, Penrith South DC, Sydney, New South Wales 1797, Australia
| | - David G. Harman
- School of Medicine, Western Sydney University, Building 30, Goldsmith Avenue, Campbelltown, New South Wales 2560, Australia
- Molecular Medicine Research Group, School of Medicine, Western Sydney University, Building 30, Goldsmith Avenue, Campbelltown, New South Wales 2560, Australia
| | - Janice R. Aldrich-Wright
- School of Science, Western Sydney University, Locked Bag, Penrith South DC, Sydney, New South Wales 1797, Australia
- Nanoscale Organization and Dynamics Group, Western Sydney University, Campbelltown, New South Wales 2560, Australia
| | - Thanh V. Nguyen
- School of Chemistry, University of New South Wales, Sydney New South Wales 2052, Australia
| | - Christopher P. Gordon
- School of Science, Western Sydney University, Locked Bag, Penrith South DC, Sydney, New South Wales 1797, Australia
- Molecular Medicine Research Group, School of Medicine, Western Sydney University, Building 30, Goldsmith Avenue, Campbelltown, New South Wales 2560, Australia
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Shyshkanov SA, Orlov NV. Design of Selenium-Based Chiral Chemical Probes for Simultaneous Enantio- and Chemosensing of Chiral Carboxylic Acids with Remote Stereogenic Centers by NMR Spectroscopy. Chemistry 2016; 22:15458-15467. [DOI: 10.1002/chem.201602884] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2016] [Indexed: 11/10/2022]
Affiliation(s)
- Sergey A. Shyshkanov
- Zelinsky Institute of Organic Chemistry; Russian Academy of Sciences; Leninsky Prospekt, 47 Moscow 119991 Russia
| | - Nikolai V. Orlov
- Zelinsky Institute of Organic Chemistry; Russian Academy of Sciences; Leninsky Prospekt, 47 Moscow 119991 Russia
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Cherkupally P, Ramesh S, de la Torre BG, Govender T, Kruger HG, Albericio F. Immobilized coupling reagents: synthesis of amides/peptides. ACS COMBINATORIAL SCIENCE 2014; 16:579-601. [PMID: 25330282 DOI: 10.1021/co500126y] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
The primary idea of using immobilized reagents in organic synthetic chemistry is to simplify the downstream process, product workup and isolation, and therefore avoiding time-consuming and expensive chromatographic separations, which are intrinsic to every synthetic process. Numerous polymer-bounded reagents are commercially available and applicable to almost all kinds of synthetic chemistry conversions. Herein, we have covered all known supported-coupling reagents and bases which have had a great impact in amide/peptide bond formation. These coupling reagents have been used for the activation of a carboxyl moiety; thus generating an active acylating species that is ready to couple with an amine nucleophile liberating the amide/peptide and polymeric support which can be regenerated for reuse. This also addresses a large variety of anchored coupling reagents, additives, and bases that have only been employed in amide/peptide syntheses during the last six decades.
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Affiliation(s)
- Prabhakar Cherkupally
- Catalysis and Peptide Research Unit, School of Health Sciences, University of Kwazulu-Natal, Durban 4001, South Africa
| | - Suhas Ramesh
- Catalysis and Peptide Research Unit, School of Health Sciences, University of Kwazulu-Natal, Durban 4001, South Africa
| | - Beatriz G. de la Torre
- Catalysis and Peptide Research Unit, School of Health Sciences, University of Kwazulu-Natal, Durban 4001, South Africa
- School of Chemistry, Yachay Tech, Yachay City of Knowledge, 100119 Urcuqui, Ecuador
| | - Thavendran Govender
- Catalysis and Peptide Research Unit, School of Health Sciences, University of Kwazulu-Natal, Durban 4001, South Africa
| | - Hendrik G. Kruger
- Catalysis and Peptide Research Unit, School of Health Sciences, University of Kwazulu-Natal, Durban 4001, South Africa
| | - Fernando Albericio
- Catalysis and Peptide Research Unit, School of Health Sciences, University of Kwazulu-Natal, Durban 4001, South Africa
- School of Chemistry, Yachay Tech, Yachay City of Knowledge, 100119 Urcuqui, Ecuador
- School of Chemistry and Physics, University of KwaZulu-Natal, Durban 4001, South Africa
- Institute for Research in Biomedicine-Barcelona (IRB-Barcelona), 08028 Barcelona, Spain
- CIBER-BBN, Networking Centre on Bioengineering, Biomaterials and Nanomedicine, Barcelona Science Park, 08028 Barcelona, Spain
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Orlov NV, Ananikov VP. First principles design of derivatizing agent for direct determination of enantiomeric purity of chiral alcohols and amines by NMR spectroscopy. Chem Commun (Camb) 2010; 46:3212-4. [DOI: 10.1039/b923359h] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Kunishima M, Yamamoto K, Watanabe Y, Hioki K, Tani S. Development of novel polymer-type dehydrocondensing reagents comprised of chlorotriazines. Chem Commun (Camb) 2005:2698-700. [PMID: 15917924 DOI: 10.1039/b501917f] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A novel immobilized dehydrocondensing reagent comprised of a triazine-type dehydrocondensing reagent itself in a polymerized form was synthesized by copolymerization between tetra(ethylene glycol) bis(dichlorotriazinyl) ether and tris(2-aminoethyl)amine.
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Affiliation(s)
- Munetaka Kunishima
- Faculty of Pharmaceutical Sciences, Kobe Gakuin University, Nishi-ku, Kobe 651-2180, Japan.
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Floyd CD, Leblanc C, Whittaker M. Combinatorial chemistry as a tool for drug discovery. PROGRESS IN MEDICINAL CHEMISTRY 2000; 36:91-168. [PMID: 10818672 DOI: 10.1016/s0079-6468(08)70046-8] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The question 'will combinatorial chemistry deliver real medicines' has been posed [96]. First it is important to realise that the chemical part of the drug discovery process cannot stand alone; the integration of synthesis and biological assays is fundamental to the combinatorial approach. The results presented in Tables 3.1 to 3.8 suggest that so far smaller directed combinatorial libraries have obtained equivalent results to those obtained previously from traditional medicinal chemistry analogue programs. Unfortunately, because of the long time it takes to develop pharmaceutical drugs there are no examples yet of marketed drugs discovered by combinatorial methods. There are interesting examples where active leads have been discovered from the screening of the same library against multiple targets (e.g. libraries 13, 39, 43, 66, 71 and 76). It is now possible to handle much larger libraries of non-oligomeric structures and the chemistry required for such applications is becoming available. Whether combinatorial approaches can also be adapted to deal with all the other requirements of a successful pharmaceutical (lack of toxicity, bioavailability etc.) is open to question but there are already examples such as cassette dosing [235-237]. However we can still be optimistic about the possibility of larger libraries producing avenues of investigation for the medicinal chemist to develop into real drugs. Combinatorial chemistry is an important tool for the medicinal chemist.
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Affiliation(s)
- C D Floyd
- British Biotech Pharmaceuticals Limited, Oxford, U.K
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Abstract
The current interest in solid-phase organic synthesis has led to a renewed interest in a complementary technique in which solid supported reagents are used in solution phase chemistry. This technique obviates the need for attachment of the substrate to a solid-support, and enables the chemist to monitor the reactions using familiar analytical techniques. The purpose of this review is to increase awareness of the wide range of useful transformations which can be accomplished using solid-supported reagents.
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Affiliation(s)
- D H Drewry
- Glaxo Wellcome Research and Development, Research Triangle Park, NC 27709, USA
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