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Jiao J, Kavdia K, Pagala V, Palmer L, Finkelstein D, Fan Y, Peng J, Demontis F. An age-downregulated ribosomal RpS28 protein variant regulates the muscle proteome. G3-GENES GENOMES GENETICS 2021; 11:6273667. [PMID: 33974070 PMCID: PMC8495913 DOI: 10.1093/g3journal/jkab165] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/29/2021] [Accepted: 05/06/2021] [Indexed: 11/14/2022]
Abstract
Recent evidence indicates that the composition of the ribosome is heterogeneous and that multiple types of specialized ribosomes regulate the synthesis of specific protein subsets. In Drosophila, we find that expression of the ribosomal RpS28 protein variants RpS28a and RpS28-like preferentially occurs in the germline, a tissue resistant to aging and that it significantly declines in skeletal muscle during aging. Muscle-specific overexpression of RpS28a at levels similar to those seen in the germline decreases early mortality and promotes the synthesis of a subset of proteins with known anti-aging roles, some of which have preferential expression in the germline. These findings indicate a contribution of specialized ribosomal proteins to the regulation of the muscle proteome during aging.
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Affiliation(s)
- Jianqin Jiao
- Department of Developmental Neurobiology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA
| | - Kanisha Kavdia
- Department of Structural Biology, Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA
| | - Vishwajeeth Pagala
- Department of Structural Biology, Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA
| | - Lance Palmer
- Department of Computational Biology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA
| | - David Finkelstein
- Department of Computational Biology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA
| | - Yiping Fan
- Department of Computational Biology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA
| | - Junmin Peng
- Department of Developmental Neurobiology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA.,Department of Structural Biology, Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA
| | - Fabio Demontis
- Department of Developmental Neurobiology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA
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Philpott DE, Kato K, Miquel J. Ultrastructural and cellular mechanisms in myocardial deconditioning in weightlessness. ADVANCES IN SPACE BIOLOGY AND MEDICINE 1992; 2:83-112. [PMID: 1342249 DOI: 10.1016/s1569-2574(08)60018-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- D E Philpott
- NASA-Ames Research Center, Moffett Field, California
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Webster GC, Webster SL. Decline in synthesis of elongation factor one (EF-1) precedes the decreased synthesis of total protein in aging Drosophila melanogaster. Mech Ageing Dev 1983; 22:121-8. [PMID: 6415351 DOI: 10.1016/0047-6374(83)90105-7] [Citation(s) in RCA: 47] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
The decrease in the rate of protein synthesis in aging adult Drosophila melanogaster was found previously to be due, to a great extent, to a drop in the rate of peptide chain elongation, and principally to lowered activity of elongation factor one (EF-1). This decrease does not appear to be caused by appearance of an inhibitor of peptide chain elongation. Instead, the synthesis of EF-1 declines markedly early in adult life. This decrease is followed by lowered activity of EF-1 and by a drop in the synthesis of most of the cellular proteins.
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Blazejowski CA, Webster GC. Decreased rates of protein synthesis by cell-free preparations from different organs of aging mice. Mech Ageing Dev 1983; 21:345-56. [PMID: 6350740 DOI: 10.1016/0047-6374(83)90051-9] [Citation(s) in RCA: 31] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Protein synthetic activity was determined in postmitochondrial preparations from heart, brain, kidney, liver and skeletal muscle of 5-26-month-old female C57B1/6J mice. An age-dependent decrease in the rate of protein synthesis was exhibited by all preparations except heart muscle. A 65% decrease in translational rate was found in liver, with the greatest decrease appearing after 21 months. Translation in the brain preparation declined little during the first 20 months, but dropped 33% between 20 and 26 months. The kidney preparation decreased 30% during the first 16 months and 70% by the end of 26 months of age. Skeletal muscle showed an overall decrease of 85% in translation rate. In contrast, heart muscle decreased no more than 10% over the life-span of the mice. From these results, it appears that aging has a differential effect on protein synthesis in different kinds of cells.
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Azelis AE, McMullen KM, Webster GC. Progressive reduction in protein synthesis during involution and aging of the mouse thymus. Mech Ageing Dev 1982; 20:361-8. [PMID: 6762468 DOI: 10.1016/0047-6374(82)90103-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
Total proteolytic activity and protein synthesis were measured in cell-free extracts of the thymus during its involution in 1-30-week-old C57Bl/6J mice, and in 10-, 12-, 14-, and 24-month-old adult mice of the same strain. The mean specific activity of the proteolytic enzymes exhibited no significant change during involution or throughout the mean life-span of the animals. In contrast, the rate of protein synthesis decreased rapidly during involution, and continued to decrease at a slower rate during aging of the mice.
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8
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Abstract
The peptide chain elongation stage of protein synthesis in Drosophila melanogaster was found to decrease markedly with age. The decrease paralleled the age-related decrease in overall protein synthesis. In contrast, the termination stage showed little decrease until the organisms were very old. Of the three reactions that comprise peptide chain elongation, the binding of aminoacyl-tRNA to ribosomes decreased greatly with age, and the decrease paralleled that of peptide chain elongation and of overall protein synthesis. The peptidyl transfer reaction decreased moderately, and the translocation reaction exhibited no measurable decrease with age. Thus, decreased binding of aminoacyl-tRNA to ribosomes appeared to be a major contributor to the age-related decreases in peptide chain elongation and overall protein synthesis.
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Webster GC, Webster SL, Landis WA. The effect of age on the initiation of protein synthesis in Drosophila melanogaster. Mech Ageing Dev 1981; 16:71-9. [PMID: 6789014 DOI: 10.1016/0047-6374(81)90034-8] [Citation(s) in RCA: 24] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
Polyribosome levels exhibited a marked, age-related decrease in adult Drosophila melanogaster. Since decreased polyribosome levels can be due to decreased initiation of translation, initiation was measured by determination of methionyl-tRNA binding to the 40 S and 80 S initiation complexes. Compared with 1-day-old adults, 48-day-old adults exhibited no more than a 12% decrease in methionyl-tRNA binding to 40 S subunits and a 20% decrease in binding to 80 S particles. Increased age, therefore, had relatively little effect on initiation, and the decreased polyribosomal content was probably due to the deterioration of some other component of the translation system.
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12
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Chen JJ, Brot N, Weissbach H. RNA and protein synthesis in cultured human fibroblasts derived from donors of various ages. Mech Ageing Dev 1980; 13:285-95. [PMID: 6158635 DOI: 10.1016/0047-6374(80)90041-x] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
RNA synthesis in human fibroblasts from donors of various ages was studied in fibroblasts made permeable to nucleoside triphosphates with the nonionic detergent Nonidet P40. Cells from donors of 11 years and older showed a 30-40% decline in total RNA synthesis. The decrease in RNA synthesis was primarily due to a lowering of RNA polymerase II activity (alpha-amanitin sensitive). Studies on the incorporation of leucine into protein also showed a 30-40% decrease in cells from older donors.
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Burns AL, Kaulenas MS. Analysis of the translational capacity of the male accessory gland during aging in Acheta domesticus. Mech Ageing Dev 1979; 11:153-69. [PMID: 513851 DOI: 10.1016/0047-6374(79)90051-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The protein synthesizing capacity of the male cricket accessory gland was inspected for changes associated with aging by analysis of organs from young (2 weeks post-imaginal molt), middle-aged (4 and 6 weeks) and senescent (8 weeks) animals. Total RNA content and the percentage of ribosomes in polysomes show an increase up to 4 weeks and then a steady decline. The rates of protein synthesis by young and old glands incubated in vitro were comparable, although the old glands were significantly less efficient in precursor uptake and therefore showed lower incorporation levels. The overall picture appears to be one of a steady but unspectacular decline in protein synthesizing capacity in aging animals. The quality of the secretory proteins formed by young and old glands was inspected by SDS--polyacrylamide gel electrophoresis and by isoelectric focusing, using both wide and narrow pH-range gels. While some differences in the banding patterns of isoelectric focusing gels were detected, they were eliminated by the inclusion of Triton X-100 in the gels. No other evidence for age-associated qualitative or quantitative changes was detected, strongly suggesting that proteins from young and old glands are identical.
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Johnson JE. Fine structure of IMR-90 cells in culture as examined by scanning and transmission electron microscopy. Mech Ageing Dev 1979; 10:405-43. [PMID: 470467 DOI: 10.1016/0047-6374(79)90022-8] [Citation(s) in RCA: 43] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Cells from the new strain IMR-90 were examined by scanning (SEM) and transmission (TEM) electron microscopy at early, middle, and late population doubling levels. The cells are characteristically flattened and elongated and arranged in clusters from 1 to several cells thick. Long thin processes extend from the poles and sides of the cells. The number of blebs and microvilli on the cell surface varies. In later population doubling level (PDL) cultures, a larger number of cells have greater quantities of microvilli on their surface. It is suggested that the increased number of microvilli might represent an increased level of differentiation. By TEM the cells typically have elongated to oval shaped nuclei which are sometimes deeply invaginated. The cytoplasm contains a well developed Golgi region, elongated mitochondria, microtubules, filaments, a variety of vesicles, vacuoles and dense bodies and large amounts of RNA in the form of granular endoplasmic reticulum and ribosomes. Cytoplasmic appearance, particularly the number of dense bodies, varies widely at all PDL. With increasing PDL, cells tend to have nuclei with more condensed chromatin, and a cytoplasm containing less mitochondria and granular endoplasmic reticulum and more dense bodies. Also at later PDL there is a higher frequency of cells containing long, thin dense mitochondria as well as bizarre shaped mitochondria. In older populations there are many cells in a state of filamentous degeneration. Cells with large numbbers of surface projections (microvilli) tend to be correlated with an osmiophilic cytoplasm containing many filaments and numerous dense bodies.
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