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For: Rice P, Mizuuchi K. Structure of the bacteriophage Mu transposase core: a common structural motif for DNA transposition and retroviral integration. Cell 1995;82:209-20. [PMID: 7628012 DOI: 10.1016/0092-8674(95)90308-9] [Citation(s) in RCA: 186] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Number Cited by Other Article(s)
1
Spínola-Amilibia M, Araújo-Bazán L, de la Gándara Á, Berger JM, Arias-Palomo E. IS21 family transposase cleaved donor complex traps two right-handed superhelical crossings. Nat Commun 2023;14:2335. [PMID: 37087515 PMCID: PMC10122671 DOI: 10.1038/s41467-023-38071-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2022] [Accepted: 04/14/2023] [Indexed: 04/24/2023]  Open
2
Ghanim GE, Rio DC, Teixeira FK. Mechanism and regulation of P element transposition. Open Biol 2020;10:200244. [PMID: 33352068 PMCID: PMC7776569 DOI: 10.1098/rsob.200244] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2020] [Accepted: 11/26/2020] [Indexed: 12/05/2022]  Open
3
Chen L, Zhang S, Pan X, Hu X, Zhang YH, Yuan F, Huang T, Cai YD. HIV infection alters the human epigenetic landscape. Gene Ther 2018;26:29-39. [PMID: 30443044 DOI: 10.1038/s41434-018-0051-6] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2018] [Revised: 10/30/2018] [Accepted: 10/31/2018] [Indexed: 02/07/2023]
4
Fuller JR, Rice PA. Target DNA bending by the Mu transpososome promotes careful transposition and prevents its reversal. eLife 2017;6. [PMID: 28177285 PMCID: PMC5357137 DOI: 10.7554/elife.21777] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2016] [Accepted: 02/07/2017] [Indexed: 12/19/2022]  Open
5
Hickman AB, Dyda F. DNA Transposition at Work. Chem Rev 2016;116:12758-12784. [PMID: 27187082 PMCID: PMC6380494 DOI: 10.1021/acs.chemrev.6b00003] [Citation(s) in RCA: 73] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
6
Zhang D, Burroughs AM, Vidal ND, Iyer LM, Aravind L. Transposons to toxins: the provenance, architecture and diversification of a widespread class of eukaryotic effectors. Nucleic Acids Res 2016;44:3513-33. [PMID: 27060143 PMCID: PMC4857004 DOI: 10.1093/nar/gkw221] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2016] [Accepted: 03/22/2016] [Indexed: 01/13/2023]  Open
7
Transposable Phage Mu. Microbiol Spectr 2016;2. [PMID: 26104374 DOI: 10.1128/microbiolspec.mdna3-0007-2014] [Citation(s) in RCA: 44] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
8
Miyazono KI, Ishino S, Tsutsumi K, Ito T, Ishino Y, Tanokura M. Structural basis for substrate recognition and processive cleavage mechanisms of the trimeric exonuclease PhoExo I. Nucleic Acids Res 2015;43:7122-36. [PMID: 26138487 PMCID: PMC4538837 DOI: 10.1093/nar/gkv654] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2015] [Accepted: 06/15/2015] [Indexed: 11/30/2022]  Open
9
Hickman AB, Dyda F. Mechanisms of DNA Transposition. Microbiol Spectr 2015;3:MDNA3-0034-2014. [PMID: 26104718 PMCID: PMC7422641 DOI: 10.1128/microbiolspec.mdna3-0034-2014] [Citation(s) in RCA: 69] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2014] [Indexed: 12/15/2022]  Open
10
Ciubotaru M, Surleac M, Musat MG, Rusu AM, Ionita E, Albu PCC. DNA bending in the synaptic complex in V(D)J recombination: turning an ancestral transpososome upside down. Discoveries (Craiova) 2014;2:e13. [PMID: 32309545 PMCID: PMC6941560 DOI: 10.15190/d.2014.5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
11
Kita M, Nakamura H, Takano Y. Density functional study of the phosphate diester hydrolysis of RNA in RNA/DNA hybrid by RNase HI. Mol Phys 2014. [DOI: 10.1080/00268976.2013.820854] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
12
Harshey RM. The Mu story: how a maverick phage moved the field forward. Mob DNA 2012;3:21. [PMID: 23217166 PMCID: PMC3562280 DOI: 10.1186/1759-8753-3-21] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2012] [Accepted: 11/13/2012] [Indexed: 01/12/2023]  Open
13
Montaño SP, Pigli YZ, Rice PA. The μ transpososome structure sheds light on DDE recombinase evolution. Nature 2012;491:413-7. [PMID: 23135398 PMCID: PMC3536463 DOI: 10.1038/nature11602] [Citation(s) in RCA: 111] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2012] [Accepted: 09/19/2012] [Indexed: 12/11/2022]
14
Interactions of host proteins with the murine leukemia virus integrase. Viruses 2012;2:1110-45. [PMID: 21637732 PMCID: PMC3104679 DOI: 10.3390/v2051110] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
15
Rasila TS, Vihinen M, Paulin L, Haapa-Paananen S, Savilahti H. Flexibility in MuA transposase family protein structures: functional mapping with scanning mutagenesis and sequence alignment of protein homologues. PLoS One 2012;7:e37922. [PMID: 22666413 PMCID: PMC3362531 DOI: 10.1371/journal.pone.0037922] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2012] [Accepted: 04/26/2012] [Indexed: 12/13/2022]  Open
16
Peletskaya E, Andrake M, Gustchina A, Merkel G, Alexandratos J, Zhou D, Bojja RS, Satoh T, Potapov M, Kogon A, Potapov V, Wlodawer A, Skalka AM. Localization of ASV integrase-DNA contacts by site-directed crosslinking and their structural analysis. PLoS One 2011;6:e27751. [PMID: 22145019 PMCID: PMC3228729 DOI: 10.1371/journal.pone.0027751] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2011] [Accepted: 10/24/2011] [Indexed: 01/26/2023]  Open
17
Lewis LA, Astatke M, Umekubo PT, Alvi S, Saby R, Afrose J. Soluble expression, purification and characterization of the full length IS2 Transposase. Mob DNA 2011;2:14. [PMID: 22032517 PMCID: PMC3219604 DOI: 10.1186/1759-8753-2-14] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2011] [Accepted: 10/27/2011] [Indexed: 11/10/2022]  Open
18
Sabogal A, Rio DC. A green fluorescent protein solubility screen in E. coli reveals domain boundaries of the GTP-binding domain in the P element transposase. Protein Sci 2011;19:2210-8. [PMID: 20842711 DOI: 10.1002/pro.499] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
19
Nesmelova IV, Hackett PB. DDE transposases: Structural similarity and diversity. Adv Drug Deliv Rev 2010;62:1187-95. [PMID: 20615441 PMCID: PMC2991504 DOI: 10.1016/j.addr.2010.06.006] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2010] [Accepted: 06/29/2010] [Indexed: 01/24/2023]
20
Nucleases: diversity of structure, function and mechanism. Q Rev Biophys 2010;44:1-93. [PMID: 20854710 DOI: 10.1017/s0033583510000181] [Citation(s) in RCA: 454] [Impact Index Per Article: 32.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
21
Structure and inhibition of herpesvirus DNA packaging terminase nuclease domain. Proc Natl Acad Sci U S A 2010;107:16078-83. [PMID: 20805464 DOI: 10.1073/pnas.1007144107] [Citation(s) in RCA: 97] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
22
Crystal structure of a novel non-Pfam protein PF2046 solved using low resolution B-factor sharpening and multi-crystal averaging methods. Protein Cell 2010;1:453-8. [PMID: 21203960 DOI: 10.1007/s13238-010-0045-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2010] [Accepted: 03/18/2010] [Indexed: 10/19/2022]  Open
23
Hickman AB, Chandler M, Dyda F. Integrating prokaryotes and eukaryotes: DNA transposases in light of structure. Crit Rev Biochem Mol Biol 2010;45:50-69. [PMID: 20067338 DOI: 10.3109/10409230903505596] [Citation(s) in RCA: 98] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
24
Fitzkee NC, Masse JE, Shen Y, Davies DR, Bax A. Solution conformation and dynamics of the HIV-1 integrase core domain. J Biol Chem 2010;285:18072-84. [PMID: 20363759 DOI: 10.1074/jbc.m110.113407] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]  Open
25
ORF157 from the archaeal virus Acidianus filamentous virus 1 defines a new class of nuclease. J Virol 2010;84:5025-31. [PMID: 20200253 DOI: 10.1128/jvi.01664-09] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
26
Hobaika Z, Zargarian L, Boulard Y, Maroun RG, Mauffret O, Fermandjian S. Specificity of LTR DNA recognition by a peptide mimicking the HIV-1 integrase {alpha}4 helix. Nucleic Acids Res 2010;37:7691-700. [PMID: 19808934 PMCID: PMC2794180 DOI: 10.1093/nar/gkp824] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]  Open
27
McColl DJ, Chen X. Strand transfer inhibitors of HIV-1 integrase: bringing IN a new era of antiretroviral therapy. Antiviral Res 2009;85:101-18. [PMID: 19925830 DOI: 10.1016/j.antiviral.2009.11.004] [Citation(s) in RCA: 132] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2009] [Revised: 11/05/2009] [Accepted: 11/10/2009] [Indexed: 01/16/2023]
28
Chung CC, Hwang SPL, Chang J. The identification of three novel genes involved in the rapid-growth regulation in a marine diatom, Skeletonema costatum. MARINE BIOTECHNOLOGY (NEW YORK, N.Y.) 2009;11:356-367. [PMID: 18841415 DOI: 10.1007/s10126-008-9150-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2008] [Accepted: 09/20/2008] [Indexed: 05/26/2023]
29
Tadokoro T, Kanaya S. Ribonuclease H: molecular diversities, substrate binding domains, and catalytic mechanism of the prokaryotic enzymes. FEBS J 2009;276:1482-93. [PMID: 19228197 DOI: 10.1111/j.1742-4658.2009.06907.x] [Citation(s) in RCA: 150] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
30
Nowotny M. Retroviral integrase superfamily: the structural perspective. EMBO Rep 2009;10:144-51. [PMID: 19165139 DOI: 10.1038/embor.2008.256] [Citation(s) in RCA: 158] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2008] [Accepted: 12/15/2008] [Indexed: 11/09/2022]  Open
31
Zhang D, Xiong H, Shan J, Xia X, Trudeau VL. Functional insight into Maelstrom in the germline piRNA pathway: a unique domain homologous to the DnaQ-H 3'-5' exonuclease, its lineage-specific expansion/loss and evolutionarily active site switch. Biol Direct 2008;3:48. [PMID: 19032786 PMCID: PMC2628886 DOI: 10.1186/1745-6150-3-48] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2008] [Accepted: 11/25/2008] [Indexed: 11/10/2022]  Open
32
Klenchin VA, Czyz A, Goryshin IY, Gradman R, Lovell S, Rayment I, Reznikoff WS. Phosphate coordination and movement of DNA in the Tn5 synaptic complex: role of the (R)YREK motif. Nucleic Acids Res 2008;36:5855-62. [PMID: 18790806 PMCID: PMC2566895 DOI: 10.1093/nar/gkn577] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
33
Dissecting the roles of MuB in Mu transposition: ATP regulation of DNA binding is not essential for target delivery. Proc Natl Acad Sci U S A 2008;105:12101-7. [PMID: 18719126 DOI: 10.1073/pnas.0805868105] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
34
Keith JH, Schaeper CA, Fraser TS, Fraser MJ. Mutational analysis of highly conserved aspartate residues essential to the catalytic core of the piggyBac transposase. BMC Mol Biol 2008;9:73. [PMID: 18694512 PMCID: PMC2533014 DOI: 10.1186/1471-2199-9-73] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2008] [Accepted: 08/11/2008] [Indexed: 01/08/2023]  Open
35
Sun PD, Foster CE, Boyington JC. Overview of protein structural and functional folds. ACTA ACUST UNITED AC 2008;Chapter 17:Unit 17.1. [PMID: 18429251 PMCID: PMC7162418 DOI: 10.1002/0471140864.ps1701s35] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
36
De Palmenaer D, Siguier P, Mahillon J. IS4 family goes genomic. BMC Evol Biol 2008;8:18. [PMID: 18215304 PMCID: PMC2266710 DOI: 10.1186/1471-2148-8-18] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2007] [Accepted: 01/23/2008] [Indexed: 01/29/2023]  Open
37
The dynamic Mu transpososome: MuB activation prevents disintegration. J Mol Biol 2007;374:1158-71. [PMID: 17988683 DOI: 10.1016/j.jmb.2007.09.079] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2007] [Revised: 09/25/2007] [Accepted: 09/26/2007] [Indexed: 11/20/2022]
38
Liang R, Liu X, Pei D, Liu J. Biochemical characterization and functional complementation of ribonuclease HII and ribonuclease HIII from Chlamydophila pneumoniae AR39. Microbiology (Reading) 2007;153:787-793. [PMID: 17322199 DOI: 10.1099/mic.0.2006/003434-0] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
39
Baranova S, Tuzikov FV, Zakharova OD, Tuzikova NA, Calmels C, Litvak S, Tarrago-Litvak L, Parissi V, Nevinsky GA. Small-angle X-ray characterization of the nucleoprotein complexes resulting from DNA-induced oligomerization of HIV-1 integrase. Nucleic Acids Res 2007;35:975-87. [PMID: 17259219 PMCID: PMC1807944 DOI: 10.1093/nar/gkl1111] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2006] [Revised: 11/28/2006] [Accepted: 12/28/2006] [Indexed: 11/12/2022]  Open
40
Lee H, Diavatis T, Tennakoon S, Yu P, Gao X. Solution structure of DNA/RNA hybrid duplex with C8-propynyl 2'-deoxyadenosine modifications: Implication of RNase H and DNA/RNA duplex interaction. BIOCHIMICA ET BIOPHYSICA ACTA 2007;1769:20-8. [PMID: 17196678 DOI: 10.1016/j.bbaexp.2006.11.004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2006] [Revised: 10/10/2006] [Accepted: 11/06/2006] [Indexed: 05/13/2023]
41
Adams CD, Schnurr B, Marko JF, Reznikoff WS. Pulling apart catalytically active Tn5 synaptic complexes using magnetic tweezers. J Mol Biol 2006;367:319-27. [PMID: 17257617 DOI: 10.1016/j.jmb.2006.12.064] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2006] [Revised: 12/19/2006] [Accepted: 12/20/2006] [Indexed: 10/01/2022]
42
Babu MM, Iyer LM, Balaji S, Aravind L. The natural history of the WRKY-GCM1 zinc fingers and the relationship between transcription factors and transposons. Nucleic Acids Res 2006;34:6505-20. [PMID: 17130173 PMCID: PMC1702500 DOI: 10.1093/nar/gkl888] [Citation(s) in RCA: 120] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]  Open
43
Lim D, Gregorio GG, Bingman C, Martinez-Hackert E, Hendrickson WA, Goff SP. Crystal structure of the moloney murine leukemia virus RNase H domain. J Virol 2006;80:8379-89. [PMID: 16912289 PMCID: PMC1563865 DOI: 10.1128/jvi.00750-06] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
44
Chon H, Tadokoro T, Ohtani N, Koga Y, Takano K, Kanaya S. Identification of RNase HII from psychrotrophic bacterium, Shewanella sp. SIB1 as a high-activity type RNase H. FEBS J 2006;273:2264-75. [PMID: 16650002 DOI: 10.1111/j.1742-4658.2006.05241.x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
45
Saariaho AH, Savilahti H. Characteristics of MuA transposase-catalyzed processing of model transposon end DNA hairpin substrates. Nucleic Acids Res 2006;34:3139-49. [PMID: 16757579 PMCID: PMC1475752 DOI: 10.1093/nar/gkl405] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]  Open
46
Richardson JM, Dawson A, O'hagan N, Taylor P, Finnegan DJ, Walkinshaw MD. Mechanism of Mos1 transposition: insights from structural analysis. EMBO J 2006;25:1324-34. [PMID: 16511570 PMCID: PMC1422158 DOI: 10.1038/sj.emboj.7601018] [Citation(s) in RCA: 81] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2005] [Accepted: 02/01/2006] [Indexed: 11/09/2022]  Open
47
Knizewski Ł, Ginalski K. Bacillus subtilis YkuK protein is distantly related to RNase H. FEMS Microbiol Lett 2006;251:341-6. [PMID: 16165328 DOI: 10.1016/j.femsle.2005.08.020] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2005] [Revised: 08/12/2005] [Accepted: 08/16/2005] [Indexed: 11/22/2022]  Open
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Lee HH, Yoon JY, Kim HS, Kang JY, Kim KH, Kim DJ, Ha JY, Mikami B, Yoon HJ, Suh SW. Crystal structure of a metal ion-bound IS200 transposase. J Biol Chem 2005;281:4261-6. [PMID: 16340015 DOI: 10.1074/jbc.m511567200] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
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Ronning DR, Guynet C, Ton-Hoang B, Perez ZN, Ghirlando R, Chandler M, Dyda F. Active site sharing and subterminal hairpin recognition in a new class of DNA transposases. Mol Cell 2005;20:143-54. [PMID: 16209952 DOI: 10.1016/j.molcel.2005.07.026] [Citation(s) in RCA: 63] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2005] [Revised: 06/22/2005] [Accepted: 07/18/2005] [Indexed: 11/28/2022]
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Chon H, Matsumura H, Koga Y, Takano K, Kanaya S. Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus. J Mol Biol 2005;356:165-78. [PMID: 16343535 DOI: 10.1016/j.jmb.2005.11.017] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2005] [Revised: 11/02/2005] [Accepted: 11/06/2005] [Indexed: 10/25/2022]
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