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Bolivar JM, Eisl I, Nidetzky B. Advanced characterization of immobilized enzymes as heterogeneous biocatalysts. Catal Today 2016. [DOI: 10.1016/j.cattod.2015.05.004] [Citation(s) in RCA: 129] [Impact Index Per Article: 16.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Physico-mathematical simulation of a homogeneous thermal field of multichannel raster matrixes for sensors of oxygen. SENSORS 2015; 15:1404-16. [PMID: 25591170 PMCID: PMC4327084 DOI: 10.3390/s150101404] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/29/2014] [Accepted: 12/25/2014] [Indexed: 01/09/2023]
Abstract
In the paper, an opportunity for the development of multichannel transcutaneous raster matrixes for sensors of oxygen on the basis of an electrochemical cell sensor is described. An analysis of the influence of heat sources on the distribution of the temperature pattern of a raster matrix for sensors of oxygen had been carried out, and their optimum configuration had been found. The application of such matrixes will enable one to obtain information about the distribution of the partial pressure of oxygen from the skin cover of the object of research in dynamics, to assess its functional health pattern in a more comprehensive way and to control the effect of possible remedial actions.
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Bolivar JM, Schelch S, Mayr T, Nidetzky B. Dissecting Physical and Biochemical Factors of Catalytic Effectiveness in Immobilized D
-Amino Acid Oxidase by Real-Time Sensing of O2
Availability Inside Porous Carriers. ChemCatChem 2014. [DOI: 10.1002/cctc.201301026] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Bolivar JM, Consolati T, Mayr T, Nidetzky B. Quantitating intraparticle O2gradients in solid supported enzyme immobilizates: Experimental determination of their role in limiting the catalytic effectiveness of immobilized glucose oxidase. Biotechnol Bioeng 2013; 110:2086-95. [DOI: 10.1002/bit.24873] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2012] [Revised: 01/29/2013] [Accepted: 02/06/2013] [Indexed: 12/12/2022]
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Bolivar JM, Consolati T, Mayr T, Nidetzky B. Shine a light on immobilized enzymes: real-time sensing in solid supported biocatalysts. Trends Biotechnol 2013; 31:194-203. [PMID: 23384504 DOI: 10.1016/j.tibtech.2013.01.004] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2012] [Revised: 01/06/2013] [Accepted: 01/07/2013] [Indexed: 01/01/2023]
Abstract
Enzyme immobilization on solid supports has been key to biotransformation development. Although technologies for immobilization have largely reached maturity, the resulting biocatalysts are not well understood mechanistically. One limitation is that their internal environment is usually inferred from external data. Therefore, biological consequences of the immobilization remain masked by physical effects of mass transfer, obstructing further development. Work reviewed herein shows that opto-chemical sensing performed directly within the solid support enables the biocatalyst's internal environment to be uncovered quantitatively and in real time. Non-invasive methods of intraparticle pH and O2 determination are presented, and their use as process analytical tools for development of heterogeneous biocatalysts is described. Method diversification to other analytes remains a challenging task for the future.
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Affiliation(s)
- Juan M Bolivar
- Institute of Biotechnology and Biochemical Engineering, Graz University of Technology, Petersgasse 12, A-8010 Graz, Austria
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Pilkington PH, Margaritis A, Mensour NA, Russell I. FUNDAMENTALS OF IMMOBILISED YEAST CELLS FOR CONTINUOUS BEER FERMENTATION: A REVIEW. JOURNAL OF THE INSTITUTE OF BREWING 2013. [DOI: 10.1002/j.2050-0416.1998.tb00970.x] [Citation(s) in RCA: 92] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Pilkington H, Margaritis A, Mensour N, Sobczak J, Hancock I, Russell I. Kappa-Carrageenan Gel Immobilisation of Lager Brewing Yeast. JOURNAL OF THE INSTITUTE OF BREWING 2012. [DOI: 10.1002/j.2050-0416.1999.tb00032.x] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Xu X, Stewart PS, Chen X. Transport limitation of chlorine disinfection of Pseudomonas aeruginosa entrapped in alginate beads. Biotechnol Bioeng 2009; 49:93-100. [PMID: 18623558 DOI: 10.1002/(sici)1097-0290(19960105)49:1<93::aid-bit12>3.0.co;2-c] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
An artificial biofilm system consisting of Pseudomonas aeruginosa entrapped in alginate and agarose beads was used to demonstrate transport limitation of the rate of disinfection of entrapped bacteria by chlorine. Alginate gel beads with or without entrapped bacteria consumed chlorine. The specific rate of chlorine consumption increased with increasing cell loading in the gel beads and decreased with increasing bead radius. The value of an observable modulus comparing the rates of reaction and diffusion ranged from less than 0.1 to 8 depending on the bead radius and cell density. The observable modulus was largest for large (3-mm-diameter) beads with high cell loading (1.8 x 10(9) cfu/cm(3)) and smallest for small beads (0.5 mm diameter) with no cells added. A chlorine microelectrode was used to measure chlorine concentration profiles in agarose beads (3.0 mm diameter). Chlorine fully penetrated cell-free agarose beads rapidly; the concentration of chlorine at the bead center reached 50% of the bulk concentration within approximately 10 min after immersion in chlorine solution. When alginate and bacteria were incorporated into an agarose bead, pronounced chlorine concentration gradients persisted within the gel bead. Chlorine did gradually penetrate the bead, but at a greatly retarded rate; the time to reach 50% of the bulk concentration at the bead center was approximately 46 h. The overall rate of disinfection of entrapped bacteria was strongly dependent on cell density and bead radius. Small beads with low initial cell loading (0.5 mm diameter, 1.1 x 10(7) cfu/cm(3)) experienced rapid killing; viable cells could not be detected (<1.6 x 10(5) cfu/cm(3)) after 15 min of treatment in 2.5 mg/L chlorine. In contrast, the number of viable cells in larger beads with a higher initial cell density (3.0 mm diameter, 2.2 x 10(9) cfu/cm(3)) decreased only about 20% after 6 h of treatment in the same solution. Spatially nonuniform killing of bacteria within the beads was demonstrated by measuring the transient release of viable cells during dissolution of the beads. Bacteria were killed preferentially near the bead surface. Experimental results were consistent with transport limitation of the penetration of chlorine into the artificial biofilm arising from a reaction-diffusion interaction. The methods reported here provide tools for diagnosing the mechanism of biofilm resistance to reactive antimicrobial agents in such applications as the treatment of drinking and cooling waters.
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Affiliation(s)
- X Xu
- Center for Biofilm Engineering, Montana Bozeman, Montana 59717, USA
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Verschuren PG, Cardona TD, Nout MJ, De Gooijer KD, Van den Heuvel JC. Location and limitation of cellulose production by Acetobacter xylinum established from oxygen profiles. J Biosci Bioeng 2000; 89:414-9. [PMID: 16232770 DOI: 10.1016/s1389-1723(00)89089-1] [Citation(s) in RCA: 44] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/1999] [Accepted: 12/30/1999] [Indexed: 11/30/2022]
Abstract
The static fermentation of coconut water sucrose by Acetobacter xylinum was carried out at initial pH's of 3.0, 4.0, 5.0 or 6.0. Cellulose was produced at the surface, and its production was most favourable at pH's 4.0 and 5.0. These pH values also allowed for optimal bacterial growth. Oxygen concentration profiles were measured with microelectrodes at different cultivation stages, and steep profiles were obtained with penetration depths between 50 and 100 microm. A substrate penetration depth analysis confirmed the hypothesis that the first stage of the fermentation is entirely oxygen controlled. Diffusion calculations showed, however, that at a later stage sucrose becomes a limiting substrate also, which was confirmed by the decrease in cellulose production rate over time. The effective diffusion coefficient of oxygen in deactivated cellulose pellicles was measured with microelectrodes, and a value of 1.4 x 10(-9) m2/s was obtained under all investigated conditions. The oxygen flux was 5.9 x 10(-6) mol/m2.s, while a significantly higher value of 9.1 x 10(-6) mol/m2.s was obtained at pH 4.0.
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Affiliation(s)
- P G Verschuren
- Department of Chemical Engineering, University of Amsterdam, Nieuwe Achtergracht 166, 1018 WV Amsterdam, The Netherlands
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The magic-bead concept: an integrated approach to nitrogen removal with co-immobilized micro-organisms. Appl Microbiol Biotechnol 1996. [DOI: 10.1007/bf00578454] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Wijffels R, Eekhof MR, de Beer D, van den Heuvel JC, Tramper J. Pseudo-steady state oxygen-concentration profiles in an agar slab containing growing Nitrobacter agilis. ACTA ACUST UNITED AC 1995. [DOI: 10.1016/0922-338x(95)94086-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
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Schlosser D, Irrgang S, Schmauder HP. Fermentation kinetics of free and immobilizedPenicillium raistrickii able perform the 15?-hydroxylation of 13-ethyl-gon-4-ene-3,17-dione. ACTA ACUST UNITED AC 1995. [DOI: 10.1002/abio.370150205] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Massen F, Lacroix C, Paquin C. Direct measurement of pH profiles in gel beads immobilizing Lactobacillus helveticus using a pH sensitive microelectrode. ACTA ACUST UNITED AC 1994. [DOI: 10.1007/bf00152144] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Irrgang S, Baumgärtl H, Schlosser D, Zimelka W, Schmauder HP. Investigations of the oxygen supply in Ca-alginate beads and microcapsules loaded with Penicillium raistrickii using a microelectrode. J Basic Microbiol 1993; 33:311-21. [PMID: 8229673 DOI: 10.1002/jobm.3620330506] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
The oxygen supply of free, Ca-alginate entrapped and microencapsulated mycelia of Penicillium raistrickii i 477 capable of 15 alpha-hydroxylation of 13-ethyl-gon-4-en-3,17-dione was investigated. Using an oxygen microelectrode distinct gradients of oxygen within the Ca-alginate beads as well as the microcapsules were detected. Slope and width of the gradients were investigated in dependence on the kind of immobilization, the culture age and the cell density on or in the carrier as well as the different forms of the oxygen supply in the medium. So it could be shown that large parts of immobilizates, approximately 96% of the diameter of both types, were oxygen-free. In comparison with free mycelia, the lower oxygen supply of the immobilized mycelia led to a metabolic shift to fermentative catabolism.
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Affiliation(s)
- S Irrgang
- Institut für Mikrobiologie, Universität Jena, Dortmund, Germany
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Hooijmans CM, Stoop ML, Boon M, Luyben KCAM. Comparison of two experimental methods for the determination of Michaelis-Menten kinetics of an immobilized enzyme. Biotechnol Bioeng 1992; 40:16-24. [DOI: 10.1002/bit.260400104] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Hooijmans CM, Geraats SGM, van Neil EWJ, Robertson LA, Heijnen JJ, Luyben KCAM. Determination of growth and coupled nitrification/denitrification by immobilizedThiosphaera pantotropha using measurement and modeling of oxygen profiles. Biotechnol Bioeng 1990; 36:931-9. [DOI: 10.1002/bit.260360908] [Citation(s) in RCA: 32] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Huang J, Hooijmans CM, Briasco CA, Geraats SG, Luyben KC, Thomas D, Barbotin JN. Effect of free-cell growth parameters on oxygen concentration profiles in gel-immobilized recombinantEscherichia coli. Appl Microbiol Biotechnol 1990; 33:619-23. [PMID: 1366942 DOI: 10.1007/bf00604925] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Abstract
Oxygen concentration profiles in immobilized recombinant cells were measured using a microsensor. Experimental results showed that the final depth of oxygen penetration in the carrageenan gel was always in the range 80-100 microns for the strains and media used, although profiles of oxygen concentration during the early stages of cell growth depended on the strain and nutrient medium used. Variations in the oxygen profiles corresponded to differences in kinetic parameters measured for the same strains and media in free-cell experiments.
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Affiliation(s)
- J Huang
- Laboratoire de Technologie Enzymatique, U.R.A. no. 523 du CNRS, Université de Technologie de Compiègne, France
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Hooijmans CM, Briasco CA, Huang J, Geraats BG, Barbotin JN, Thomas D, Luyben KC. Measurement of oxygen concentration gradients in gel-immobilized recombinantEscherichia coli. Appl Microbiol Biotechnol 1990; 33:611-8. [PMID: 1366941 DOI: 10.1007/bf00604924] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
In this study, an oxygen microsensor was used to measure oxygen concentration profiles in carrageenan gel particles containing growing, immobilized Escherichia coli B (pTG201). Profiles, which were measured at intervals during continuous culture of gel slabs and beads, became increasingly steep with time. The oxygen penetration depth in the gel decreased with time, eventually reaching a steady state value of approximately 100 microns for both gel beads and slabs. A reaction-diffusion model employing zero-order cell growth kinetics was found to provide an excellent fit to the experimental concentration data. Growth rates estimated from profiles obtained during the first few hours of culture were 0.24h-1 (gel slabs) and 0.18h-1 (beads), compared to a value of 0.30 h-1 measured in free-cell suspensions at 25 degrees C.
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Affiliation(s)
- C M Hooijmans
- Department of Biochemical Engineering, Delft University of Technology, The Netherlands
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Experimental determination of the mass transfer boundary layer around a spherical biocatalyst particle. ACTA ACUST UNITED AC 1990. [DOI: 10.1016/0300-9467(90)80065-k] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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