Partial primary structure of the immunoglobulin light chain constant region of a single rabbit of b5 allotype

A genomic gene encoding the b5 rabbit immunoglobulin kappa constant region: implications for latent allotype phenomenon

We previously reported that domestic rabbits of five immunoglobulin kappa allotype strains (b4v, b4, b5, b6, and b9) harbor at least two DNA sequences that hybridize strongly to kappa constant region probes in Southern blots. One of these sequences ("type A") has been identified as encoding the constant region of the kappa 2 isotype, an immunoglobulin chain that most rabbits express only at low levels, if at all. We identified the second sequence--for rabbits of the b4 allotype--as encoding the nominal b4 kappa chain (or kappa 1 isotype), but for rabbits of other allotypes no definite identification for this "type B" sequence could be made. Here we suggest that the type B sequence in rabbits of the other domestic allotypes also encodes the nominal kappa 1 immunoglobulin chain. We show this directly for the b5 allotype; a type B sequence cloned from b5 DNA has been found to contain an apparently functional gene encoding the b5 constant region sequence. Indirect arguments suggest the corresponding conclusion for the b4v, b6, and b9 allotypes. We have considered the implications of these results for the phenomenon of "latent allotype" expression.

Mouse monoclonal antibodies against rabbit b6 allotype and their use for characterization of light-chain subpopulations

Mouse anti-allotypic hybridomas directed against different antigenic determinants of the b6 rabbit allotype have been raised. The fine specificity of these monoclonal antibodies (mAbs) was determined by radioimmunoassay and it was possible to classify them into three groups, each directed against distinct epitopes of the b6 allotype. Hare "b6" IgG were tested with anti-b6 mAb and no reaction was found indicating that the number of allotopes present on b6 molecules is greater than the three detected by the mAb. Comparative analysis by precipitation in gel of IgG from homozygous b6/b6 rabbits using mouse mAb and rabbit anti-b6 antibodies suggested that at least two categories of molecules can be discriminated. The observation of b6 subpopulations was confirmed by isolation of a minor subpopulation of IgG on a mouse monoclonal immunoadsorbent.

The sequences of rabbit kappa light chains of b4 and b5 allotypes differ more in their constant regions than in their 3' untranslated regions

We report the sequence of a cDNA clone encoding the entire variable and constant regions of a rabbit kappa light chain of b5 allotype. The deduced amino acid sequence of the variable region (positions 1-95) is 86% homologous to that of a b4 light chain protein [BS-1) (1) but the b4 and b5 constant regions are only 74% homologous. Comparison of this DNA sequence to that of a cDNA clone encoding a b4 constant region shows that the kappa allotypes b4 and b5 have diverged significantly more in their coding region than in the 3' untranslated regions (86% vs 96% nucleotide sequence homologies). This implies either a function for the 3' untranslated region with evolutionary pressures to conserve or an accelerated divergence of the coding regions.

Rabbit immunoglobulin kappa genes: structure of a germline b4 allotype J-C locus and evidence for several b4-related sequences in the rabbit genome

To investigate the genetic mechanism by which certain rabbits can express immunoglobulins unexpected on the basis of their pedigree (i.e., "latent" allotypes), we have begun a study of the rabbit immunoglobulin kappa gene locus. Here we report the structure of a germline genomic clone that encodes the b4 allotype of rabbit kappa immunoglobulin and corresponds to the kappa gene expressed by the rabbit-mouse hybridoma 12F2. The nucleotide sequences of the joining (J) and constant (C) regions reveal structures generally similar to the homologous mouse and human loci, although only one of the five J-like sequences of this rabbit gene is apparently expressed. Southern blotting analysis of DNA from several rabbit allotypic strains by using probes derived from the cloned b4 gene demonstrates that, in contrast to mouse and human, rabbits possess multiple kappa-related sequences. Rabbits of the nominal b4, b5, b6, and b9 allotypes each contain at least two b4-related sequences that are associated with their own J regions and that are highly homologous to the cloned b4 gene in both coding and flanking regions.

Partial amino acid sequence of a rabbit immunoglobulin light chain of allotype b5

The amino acid sequence of a rabbit immunoglobulin light chain of allotype b5 has been nearly completed. A comparison of its structure with that of light chains of allotypes b4, b6, and b9 confirms that the constant regions of these various kappa chains differ by 20-35%. The substitutions are clustered in parts of the second half of the chain, and the b5 form bears more resemblance to the b6 chain than to any other, in good agreement with previous serological data. The analysis of the variable region reveals the existence of certain allotype-associated residues which have also been reported in other b5 chains, but not in proteins of the other allotypes. An examination of the rabbit light chain sequences between positions 96 and 107 suggests that this portion of the chain may be encoded separately by a joining "J" DNA segment, as has been described previously for murine and human immunoglobulins. In the rabbit, however, these J kappa regions appear to differ from one allotype to another. Together with the extensive variations of the constant regions, these data suggest that the rabbit kappa gene organization more closely resembles the murine gamma system (four different C gamma genes each flanked by its J segment) than the murine kappa system (a single C kappa gene).

Structural studies of a wild rabbit immunoglobulin light chain constant region

The amino acid sequence of a wild rabbit light chain constant region of allotype b95 was nearly completely determined by manual and automated Edman degradation procedures. The comparison of the b95 primary structure with the other b allotypes reveals about 20% substitutions between b95 and b4, b5 and b6, and 36% between b95 and b9. The substitutions are clustered in parts of the chain in agreement with our sequence data for b5 and b6. The presence in b95 of the characteristic cysteine residue at position 170 and the tryptophane residue at position 147 is in agreement with the serological similarity of these various rabbit kappa light chains. The examination of the rate of amino acid substitutions between the b95 chains and the other b allotypes shows that b95 is closer to b4, b5 and b6 than to b9.

Monoclonal antibodies specific for the b5 allotype of rabbit kappa light chains

The mouse monoclonal antibodies (mAb), 3B5 and 4B5, which recognize rabbit kappa light chains bearing the b5 allotype, were produced from separate fusions. The specificity of the mAbs was determined by solid-phase inhibition radioimmunoassay. Nonimmune sera of 15 b5b5 rabbits of various heavy chain haplotypes inhibited the binding of both mAbs to b5 IgG, whereas 20 sera from rabbits not expressing the b5 allotype were not inhibitory. In addition, the binding of both mAbs was inhibited by purified b5 light chains, but not by b4 light chains. The b5 epitope recognized by the mAbs was shown by sequential precipitation to be present on all b5-bearing molecules that are defined by an alloantiserum produced in a b4b4 rabbit. Antibody 4B5 forms strong precipitin bands with b5 serum and Ig in gel diffusion assays. An anomalous reaction of nonidentity was observed when mAb was compared to rabbit anti-b5 antiserum and a hypothesis to explain this phenomenon is proposed.

Construction of a partial rabbit spleen cDNA library and identification of immunoglobulin clones

A partial cDNA library was constructed from total poly A(+)-RNA isolated from the spleen of a rabbit (kappa allotype b5; heavy chain allotypes a3d12e15) that had been hyperimmunized with Streptococcus pneumoniae (type III). In spite of the absence of either specific DNA probes for rabbit immunoglobulin (Ig) sequences or cross-hybridizing mouse Ig DNA probes, recombinant clones containing cDNA sequences of rabbit gamma heavy chain and kappa light chains were identified by a combination of screening techniques: (a) colony hybridization using labeled mRNA; (b) mRNA hybridization selection and translation and (c) hybridization to electrophoretically fractionated poly A(+)-RNA ("Northern" analysis). Sequencing of three kappa light chain recombinant DNA sequences, including part of the 3' untranslated (UT) region, has confirmed the fact that recombinant DNA for kappa light chain mRNA has been identified. An unexpectedly high degree of homology between the 3' UT region sequence of this DNA from a rabbit of b5 allotype and the published 3' UT sequence from a b4 rabbit was found. It appears that 3' UT sequences from b4 and b5 alleles have diverged less than the coding sequences for the constant regions. The functional significance of this conservation of 3' UT sequences remains to be elucidated.

Messenger RNA from allotype-defined rabbits directing the cell-free synthesis of immunoglobulin heavy and light chains

In vitro synthesis studies were performed utilizing polyA(+)-RNA and lymphocytes from the spleens of rabbits hyperimmunized with Micrococcus luteus or Streptococcus pneumoniae (type III). PolyA(+)-RNA isolated after 4 M guanidinium thiocyanate extraction and oligo(dT)-selection appeared to be undegraded on CH3HgOH-agarose gel electrophoresis and demonstrated biological activity when translated in a rabbit reticulocyte cell-free system. The electrophoretic patterns of the specifically immunoprecipitated cell-free products were compared with those of Nonidet-P40 extracts (lysates) and secretions (supernatants) from rabbit spleen lymphocyte cultures and serum proteins. Kappa light chains with specific b allotypes, as well as immunoglobulin heavy chains, were identified. The efficient translation of mRNA of defined allotypes was a necessary prerequisite for production of characterized cDNA clones and identification of genomic sequences for rabbit immunoglobulin heavy and light chains.

Rabbit immunoglobulin allotypes: cross-reactivities of the b95 and b96 allotypic specificities with the allotypes of the b series present in domestic rabbits

In a population of wild rabbits originating from the Island of Zembra (Tunisia), several unknown allotypic specificities of the b series have been detected and two of them, b95 and b96, have already been described. In order to learn about their relationship with other allotypes of the same series and present in the domestic rabbit, a study of b95 and b96 cross-reactions with heterologous antisera was undertaken. From the data presented in this paper, it can be concluded that the b96 allotype is very closely related to the b6 allotype, which suggests that they are encoded by real structural genes at the b locus as presumed for b4 and b4var allotypes; the b95 allotype, which behaves as an intermediate form, can be considered as an ancestral allotype.

Nucleotide sequence of constant and 3' untranslated regions of a kappa immunoglobulin light chain mRNA of a homozygous b4 rabbit

A homozygous a2/a2 and b4/b4 rabbit has been hyperimmunized with Micrococcus lysodeikticus. Poly(A)-containing RNA has been isolated from the spleen and translated in vitro, and translation products have been analyzed by NaDodSO4/polyacrylamide gel electrophoresis. Double-stranded cDNA has been synthesized from poly(A)-containing RNA template and inserted in the Pst I endonuclease site of plasmid pBR322 by using the oligo(dC).oligo(dG) tailing procedure. Tetracycline-resistant ampicillin-sensitive clones containing cDNA complementary to a kappa light chain mRNA have been selected by differential screening and their ability to hybridize to a spleen mRNA having the same size as a mouse kappa light chain mRNA. Two clones, pRk-15 and pRk-32, have been selected to determine the nucleotide sequence of the constant and 3' untranslated regions of kappa light chain mRNA, by the Maxam and Gilbert partial degradation method. Comparison of homologous regions of mouse kappa chain mRNA and b4 rabbit kappa chain mRNA reveals 61% homology in the constant region and 59% homology in the 3' untranslated region.