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Marchalonis JJ, Adelman MK, Robey IF, Schluter SF, Edmundson AB. Exquisite specificity and peptide epitope recognition promiscuity, properties shared by antibodies from sharks to humans. J Mol Recognit 2001; 14:110-21. [PMID: 11301481 DOI: 10.1002/jmr.527] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
This review considers definitions of the specificity of antibodies including the development of recent concepts of recognition polyspecificity and epitope promiscuity. Using sets of homologous and unrelated peptides derived from the sequences of immunoglobulin and T cell receptor chains we offer operational definitions of cross-reactivity by investigating correlations of either identities in amino acid sequence, or in hydrophobicity/hydrophilicity profiles with degree of binding in enzyme-linked immunosorbent assays. Polyreactivity, or polyspecificity, are terms used to denote binding of a monoclonal antibody or purified antibody preparation to large complex molecules that are structurally unrelated, such as thyroglobulin and DNA. As a first approximation, there is a linear correlation between degree of sequence identity or hydrophobicity/hydrophilicity and antigenic cross-binding. However, catastrophic interchanges of amino acids can occur where changing of one amino acid out of 16 in a synthetic peptide essentially eliminates binding to certain antibodies. An operational definition of epitope promiscuity for peptides is the case where two peptides show little or no identity in amino acid sequence but bind strongly to the same antibody as shown by either direct binding or competitive inhibition. Analysis of antibodies of humans and sharks, the two most divergent species in evolution to express antibodies and the combinatorial immune response, indicates that the capacity for both exquisite specificity and epitope recognition promiscuity are essential conserved features of individual vertebrate antibodies.
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Affiliation(s)
- J J Marchalonis
- Microbiology and Immunology, College of Medicine, University of Arizona, Tucson, Arizona, USA.
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2
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Accumulation of unusual sterile transcripts of TCRβ in mouse hybridoma, murine tumour and non-human primate marmoset tumour. J Biosci 1999. [DOI: 10.1007/bf02942654] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Cone RE, Wang Y, O'Rourke J, Malley A. Extracellular (soluble) antigen-specific T cell proteins related to the T cell receptor for antigen (sTCRr): serologic and primary amino acid sequence similarity to T cell receptor alpha chains and association with cytokines. J Interferon Cytokine Res 1998; 18:55-67. [PMID: 9475668 DOI: 10.1089/jir.1998.18.55] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
Abstract
Antigen-specific-effected immunoregulation by T lymphocytes is mediated by extracellular proteins produced by T lymphocytes. These immunoproteins bind specifically to nonprocessed antigen and either induce antigen-specific immunoregulatory T cells (tsfi) or effect regulation (tsfe). T cell proteins that bind specifically to nonprocessed antigen have ben termed "T cell antigen-binding molecules" (TABM), and by definition, tsfe and tsfi are, in part, TABM. To characterize tsfi, tsfe, and TABM and understand the relationships and function of these immunoproteins, we have combined the efforts of two laboratories to compare tsfi, tsfe, and TABM isolated by each laboratory. Data obtained in one laboratory were reproduced by the other, and all reagents prepared by each laboratory were exchanged. TABM, tsfi, and tsfe were found to express TCRCalpha epitopes but not TCRCbeta epitopes. The amino acid sequence of a tryptic peptide of a T cell hybridoma TABM specific for nitrophenylhydroxy acetate (NP) is similar to a TCRalpha chain and TCR pre-alpha chain amino acid sequence. ELISA and immunoblotting demonstrated that Mr 77,000 T cell hybrid-derived tsfi, tsfe, and TABM are noncovalently associated with Mr 15,000-16,000 interleukin-10 (IL-10). ELISA also demonstrated that tsfi and tsfe are associated with I-J. The ability of tsfi and tsfe to suppress a mixed lymphocyte reaction was prevented by anti-IL-10 or anti-I-J antibodies, suggesting that antigen-specific immunoregulatory T cell proteins function by an antigen-specific focusing of immunoregulatory cytokines.
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MESH Headings
- Amino Acid Sequence
- Animals
- Antibodies/pharmacology
- Antigens/immunology
- Antigens/metabolism
- Blood Proteins/immunology
- Blood Proteins/isolation & purification
- Blood Proteins/metabolism
- Cytokines/immunology
- Epitopes/chemistry
- Epitopes/immunology
- Immunity, Cellular/drug effects
- Immunoblotting
- Interleukin-10/analysis
- Interleukin-10/immunology
- Mice
- Mice, Inbred C57BL
- Mice, Inbred CBA
- Nitrophenols/immunology
- Nitrophenols/isolation & purification
- Peptide Fragments/chemistry
- Phenylacetates
- Protein Binding
- Receptors, Antigen, T-Cell/immunology
- Receptors, Antigen, T-Cell/isolation & purification
- Receptors, Antigen, T-Cell/metabolism
- Receptors, Antigen, T-Cell, alpha-beta/chemistry
- Receptors, Antigen, T-Cell, alpha-beta/immunology
- Sequence Homology, Amino Acid
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Affiliation(s)
- R E Cone
- Vision-Immunology Center, Department of Pathology, University of Connecticut Health Center, Farmington 06030-3105, USA
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Cone RE, Malley A. Soluble, antigen-specific T-cell proteins: T-cell-based humoral immunity? IMMUNOLOGY TODAY 1996; 17:318-22. [PMID: 8763817 DOI: 10.1016/0167-5699(96)10021-9] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Affiliation(s)
- R E Cone
- Dept of Pathology, University of Connecticut Health Center, Farmington 06030-3105, USA.
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Cone RE, Marchalonis JJ. Partial amino acid sequence of monoclonal extracellular antigen-specific T cell proteins. Immunol Invest 1993; 22:541-52. [PMID: 8300161 DOI: 10.3109/08820139309084182] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Antigen-specific molecules secreted by murine T cell hybrids (TABM) specific for 4-hydroxy 3-nitrophenyl (NP) or azobenzenearsonate (ABA) were purified from ascitic fluid by ion exchange chromatography and/or affinity for antigen. Partial amino acid sequence of reduced Mr 72,000 NP-specific polypeptides and Mr 20,000 peptides prepared by treatment of the ABA-specific immunoprotein with cyanogen bromide was obtained and a septapeptide of the NP-specific TABM shared 3/7 residues with the ABA-specific TABM. Both TABM shared residues present in 95% T cell receptor for antigen (TCR) V alpha subgroup I and 83-96% murine immunoglobulin V kappa Fr3. These results provide evidence that extracellular antigen-specific T cell proteins are soluble analogues of TCR alpha chains and belong to the immunoglobulin supergene family.
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Affiliation(s)
- R E Cone
- Department of Pathology, University of Connecticut Health Center, Farmington 06030-3105
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Marchalonis JJ, Hohman VS, Kaymaz H, Schluter SF. Shared antigenic determinants of immunoglobulins in phylogeny and in comparison with T-cell receptors. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. B, COMPARATIVE BIOCHEMISTRY 1993; 105:423-41. [PMID: 8365100 DOI: 10.1016/0305-0491(93)90071-c] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
1. Immunoglobulins are a complex multigene family of proteins specified by genes encoding variable (V), sometimes diversity (D), joining (J), and constant (C) domains. 2. Cross-reactions involving conformational determinants related to the VHa system of rabbits occur on heavy chains of vertebrate species ranging from elasmobranchs to man. 3. Serological markers characteristic of mu chains, the heavy chain of the IgM macroglobulins, occur on homologous heavy chains of species representing all vertebrate classes. 4. Serological markers characteristic of gamma type heavy chains, the major isotype in man, are restricted to the mammals, but are found on representatives of even the most primitive mammals, the egg-laying monotremes. 5. Variable region markers characteristic of lambda light chains are shared by light chains of shark and man. 6. Certain idiotypic markers defined by combining site V region sequences are broadly distributed in evolution. 7. Use of synthetic peptides as antigens and in epitope mapping show that amino acid sequences from the third framework region of the variable domain are broadly shared among light chain in phylogeny and between light chains and T-cell receptor beta chains. 8. The "switch peptides" linking the V and C domains of light chains and T-cell receptors, specified by the C-terminal portion of the J segment and the N-terminus of the constant region, are exposed in the three-dimensional structure of immunoglobulin or Tcrs, show striking homology, and form broadly shared antigenic determinants characteristic of immunoglobulins. 9. Although the multigene nature of the immunoglobulins and the complexity of antigenic determinants expressed by these large proteins renders comparison among molecules difficult, serum immunoglobulins and the closely related T-cell receptors express numerous shared determinants defined on the basis of amino acid sequence homology and three-dimensional conformations.
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Affiliation(s)
- J J Marchalonis
- Department of Microbiology and Immunology, University of Arizona, Tucson 85724
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Cone RE, Weischedel AK, Urbanski M, Kristie J. Specific antigen binding by proteins secreted by an antigen-specific T cell hybrid. Mol Immunol 1992; 29:689-96. [PMID: 1584234 DOI: 10.1016/0161-5890(92)90206-d] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Antigen-specific molecules secreted by a murine T cell hybrid specific for azobenzene arsonate (ABA) were purified from ascites fluid by ion exchange chromatography and affinity for antigen. The antigen-specific proteins were purified 250 fold and were resolved predominantly as Mr 110,000 polypeptides by reduction and SDS-polyacrylamide gel electrophoresis. The ability of these molecules to bind antigen was analyzed by an ELISA using antigen-coated microtiter trays. Binding of the T cell proteins to antigen was detected with antisera specific for the proteins. Antigen binding to ABA-ovalbumin but not ovalbumin was optimal at 37 degrees C and protein derived from another T cell hybrid did not bind ABA-ovalbumin. Solid phase antigen binding was inhibited specifically by soluble ABA-ovalbumin, indicating that these T cell-derived proteins bind nominal antigen in the solid or liquid phase. It is suggested that these proteins represent a soluble, antigen specific manifestation of some T cell function.
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Affiliation(s)
- R E Cone
- Department of Pathology, University of Connecticut Health Center, Farmington 06030
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Cone RE, Clark RB, Kristie J, Wong R, Rellahan BL. T cell non-MHC-restricted antigen-binding molecules secreted or associated with the cell membrane are antigenically distinct. Cell Immunol 1991; 137:529-38. [PMID: 1893408 DOI: 10.1016/0008-8749(91)90099-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Some T cells produce membrane-associated or soluble molecules which bind nominal antigen specifically (TABM) and effect immunoregulation or events similar to cell-mediated hypersensitivity. We have used polyclonal antisera raised against an azobenzene arsonate (ABA)-specific TABM secreted by an ABA-specific T cell hybrid or against TNP-specific polypeptides produced by immunoregulatory T cells to identify the expression of soluble (secreted) or membrane-associated TABM. Ascites fluid or culture medium containing a T cell hybrid or T cell lines, respectively, contain TABM recognized only by an antiserum specific for the secreted T cell hybrid (ABA-specific) derived TABM. Conversely, an antiserum that recognized the TNP-specific polypeptides detected cell-membrane associated TABM but did not bind TABM secreted by the T cell hybrid or cell lines.
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Affiliation(s)
- R E Cone
- Department of Pathology, University of Connecticut Health Center, Farmington 06030
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DiBrino M, Ravindran B, Cone RE. T cell derived proteins from normal human sera and their relationship to T cell antigen binding molecules. CLINICAL IMMUNOLOGY AND IMMUNOPATHOLOGY 1991; 59:271-87. [PMID: 2009645 DOI: 10.1016/0090-1229(91)90024-5] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
We have used procedures which have been developed to isolate murine T cell antigen binding molecules (TABM) in order to isolate TABM from normal human sera. To begin purification, ammonium sulfate (NH4)2SO4 was added to human serum and precipitated protein was dissolved in low salt buffer and resolved by ion-exchange chromatography on carboxymethylcellulose (CM). The most strongly CM nonadherent fraction was absorbed with anti-human albumin and anti-human immunoglobulin (Ig) antibodies conjugated to Sepharose beads. The resulting nonadsorbed 110,000, 70,000 and 45,000 Mr polypeptides were reactive in ELISA with a rabbit antiserum produced against non-Ig, anti-specific molecules of rhesus monkeys. These proteins possess alpha mobility upon immunoelectrophoresis and represent 0.02 to 0.05% of total serum protein. In addition, these proteins are bound by an antiserum made against a synthetic peptide corresponding to the J region of the TcR beta chain. We have made R28, a rabbit antiserum against these serum proteins which binds specifically to tetanus-specific polypeptides obtained from the culture supernatant of human T cell lines specific for tetanus. This antiserum also binds to proteins isolated from T cell but not B cell lines, and T cell proteins are able to inhibit the binding of R28 to the human serum polypeptides. The results suggest that the proteins isolated from normal human sera are T cell antigen binding molecules.
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Affiliation(s)
- M DiBrino
- Department of Pathology, University of Connecticut Health Center, Farmington 06030
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Lee C, Ghoshal K, Beaman KD. Cloning of a cDNA for a T cell produced molecule with a putative immune regulatory role. Mol Immunol 1990; 27:1137-44. [PMID: 2247090 DOI: 10.1016/0161-5890(90)90102-6] [Citation(s) in RCA: 43] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
An expression cDNA library was constructed from the helper T cell hybridoma, A.1.1, which has been shown to produce constitutively proteins involved in the down regulation of the immune response. From this library we identified and characterized a cDNA clone, J6B7, by screening with a polyclonal antibody specific for secreted immune regulatory proteins. The mRNA for J6B7 is expressed specifically in some T cells, but not in the thymoma BW5147 or liver cells. J6B7 is 2937 nucleotides in length and contains one open reading frame encoding for a peptide of predicted Mr of 98,042. The nucleotide and deduced amino acid sequences of J6B7 did not reveal significant homology to any published sequences. Hybridization and translation experiments reveal that the J6B7 can hybrid select mRNA from total RNA isolated from either A.1.1 cells or thymic tissue which can be translated in vitro to a peptide which is bound by a monoclonal antibody (mAb) specific for antigenic determinant(s) shared by immune regulatory proteins. Furthermore, the in vitro translated proteins obtained from A.1.1 cells and thymus showed significant suppression of a mixed lymphocyte reaction (MLR) in a dose dependent manner, reaching maximum suppression of 71% and 89%, respectively. These results suggest that the cDNA, J6B7, codes for an immune regulatory protein.
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Affiliation(s)
- C Lee
- Department of Microbiology and Immunology, University of Health Sciences, Chicago Medical School, IL 60064
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Rellahan BL, Cone RE. Expression of non-MHC-restricted T cell antigen-binding molecules by thymic lymphocytes. Cell Immunol 1989; 123:166-76. [PMID: 2476242 DOI: 10.1016/0008-8749(89)90277-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Heterologous antisera which recognize non-major histocompatibility complex (MHC)-restricted T cell antigen-binding molecules (TABM) were used to characterize the expression and structure of TABM on thymic lymphocytes. Approximately 70% of thymocytes express membrane molecules bound by anti-TABM antibodies (mTABM). Antibody activity for thymocyte TABM could be removed by adsorption to splenic T cells, but not by adsorption to splenic B cells. Similarly, adsorption of the antiserum to thymocytes or splenic T cells removed antibody activity to a purified TABM whereas adsorption with B cells had no effect. Radioiodinated thymic and splenic T cell mTABM were resolved by 2D-polyacrylamide gel electrophoresis and when reduced, both populations of mTABM migrated primarily as Mr 23,000 proteins with an isoelectric point range of 6.8-7.8. Multimers of this protein were also observed at Mr 85-97,000 and 130-150,000 on both thymocytes and splenic T cells. These data indicate that MHC-unrestricted antigen-binding molecules are expressed by a majority of thymocytes and these thymic TABM are structurally and antigenically similar to mTABM on peripheral cells. This suggests an ontogenic relationship between thymic TABM and peripheral TABM.
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Affiliation(s)
- B L Rellahan
- Department of Pathology, University of Connecticut Health Center, Farmington 06032
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