Application of rumen microorganisms for an enhanced anaerobic degradation of solid organic waste materials

Potential Valorization of Organic Waste Streams to Valuable Organic Acids through Microbial Conversion: A South African Case Study

The notion of a “biobased economy” in the context of a developing country such as South Africa (SA) necessitates the development of technologies that utilize sustainable feedstocks, have simple and robust operations, are feasible at small scale and produce a variety of valuable bioproducts, thus fitting the biorefinery concept. This case study focuses on the microbial production of higher-value products from selected organic waste streams abundant in the South African agricultural sector using microbes adapted to utilize different parts of biomass waste streams. A ruminant-based carboxylate platform based on mixed or undefined anaerobic co-cultures of rumen microorganisms can convert the carbohydrate polymers in the lignocellulosic part of organic waste streams to carboxylic acids that can be upgraded to biofuels or green chemicals. Furthermore, yeast and fungi can convert the simpler carbohydrates (such as the sugars and malic acid in grape and apple pomace) to ethanol and high-value carboxylic acids, such as lactic, fumaric, succinic and citric acid. This review will discuss the combinational use of the ruminal carboxylate platform and native or recombinant yeasts to valorize biomass waste streams through the production of higher-value organic acids with various applications.

Together Is Better: The Rumen Microbial Community as Biological Toolbox for Degradation of Synthetic Polyesters

Identfication of plastics degradation and microbial community analysis of Rumen.

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Elucidating the microbial community associated with the protein preference of sludge-degrading worms

Sludge predation by aquatic worms results in an increased sludge reduction rate, which is mainly due to the specific removal of a protein fraction from the sludge. As microorganisms play an essential role in sludge hydrolysis a better understanding of the microbial community involved in the worm predation process will provide more insight into the relations between the aquatic worms, their associated microbiome and the efficient sludge reduction. In this study, the microbial community associated with predation by the Tubifex tubifex was investigated. The microbial diversity in the samples of the worm faeces (WF), predated activated sludge and protein-rich substrates were compared. The results indicated that predation on sludge resulted in a microbial change from Actinobacteria (44%) in the sludge, to Proteobacteria (64%) and Bacteriodites (36%) in the WF. Interestingly, the faecal microbial community was more related to the community in (predated) protein-rich substrates than to the community in predated or endogenously respirated activated sludge samples. This similar microbial community could be due to microbial utilisation of protein hydrolysis products. Alternatively, conditions in the worm gut could facilitate a protein hydrolysing community which assists in protein hydrolysis. The genera Burkholderiales, Chryseobacterium and Flavobacterium were found to be associated with predation by T. tubifex.

Unravelling the protein preference of aquatic worms during waste activated sludge degradation

Worm predation (WP) by Tubifex tubifex was investigated using waste activated sludge (WAS) as the substrate. In order to better understand the sludge degradation mechanisms during WP, the activity of five common hydrolytic enzymes was determined and compared among the initial feed activated sludge, endogenous respirated sludge and worm predated sludge. The results showed that the enzymatic activity decreased upon aerobic (worm) treatment of WAS and that this activity was predominantly associated with the removed solids fraction of the sludge. Interestingly, the protease activity showed a smaller decrease in activity when the worms were present. Flow cell cytometry revealed the release of intestinal bacteria from the worms, which are presumed to be largely responsible for the observed protease activity. Additionally, experiments in which T. tubifex were treated with antibiotics showed that the worms are responsible for a maximum of 73% of the observed proteolytic activity. The remaining 27% is attributed to the intestinal bacteria that exhibit a synergistic relationship with T. tubifex towards protein hydrolysis.

Anaerobic fermentation of biogas liquid pretreated maize straw by rumen microorganisms in vitro

This study intended to investigate the effect of pretreatment of maize straw with biogas liquid on followed fermentation by rumen microorganisms in vitro. The multiple effects including treated time, temperature and dosage of biogas liquid in pretreatment on the followed fermentation performance were analyzed by orthogonal array. The optimum conditions of pretreatment were 9days, 25°C and 50% (v/w) dosage of biogas liquid, which were indicated by the corresponding crystallinity index, dry matter digestibility (DMD) and acetate limiting-step concentration were 57.5%, 73.76% and 1756mg/L, respectively. The ordering sequence of the influential factors for pretreatment was treated time > temperature > dosage of biogas liquid. The results of fermentation showed that the maize straw pretreated by biogas liquid was an efficient and economic pretreatment method of maize straw.

Two-stage anaerobic digestion of biodegradable municipal solid waste using a rotating drum mesh filter bioreactor and anaerobic filter

A rotating drum mesh filter bioreactor (RDMFBR) with a 100 microm mesh coupled to an anaerobic filter was used for the anaerobic digestion of biodegradable municipal solid waste (BMW). Duplicate systems were operated for 72 days at an organic loading rate (OLR) of 7.5 g VS l(-1) d(-1). Early in the experiment most of the methane was produced in the 2nd stage. This situation gradually reversed as methanogenesis became established in the 1st stage digester, which eventually produced 86-87% of the total system methane. The total methane production was 0.2 l g(-1) VS(added) with 60-62% volatile solids destruction. No fouling was experienced during the experiment at a transmembrane flux rate of 3.5 l m(-2) h(-1). The system proved to be robust and stably adjusted to a shock loading increase to 15 g VS l(-1) d(-1), although this reduced the overall methane production to 0.15 l g(-1) VS(added).

The effect of biomass density on cellulose solubilisation rates

The aim of this work was to compare the impact of inoculation density on the rate of cellulose hydrolysis by a rumen derived culture with that of a microbial enrichment from an organic waste anaerobic digester. The results showed a linear relationship between the mass of biomass at the start of the first order degradation phase (Xo) and the first order hydrolysis rate (r) for both rumen inoculated and leachate inoculated cellulose digestions and that the slopes of these relationships were not distinguishable. This suggested that differences in the microbial community, media and other environmental factors had a lesser impact on the hydrolysis rate compared to the effect of the number of cells in the system. This could be of great importance to industrial applications of anaerobic digestion technologies as it suggested that if cells densities in the waste treatment digesters could be boosted to match those seen in the rumen, then the rates of the cellulose hydrolysis would rise.

The effect of media changes on the rate of cellulose solubilisation by rumen and digester derived microbial communities

The aim of this study was to investigate the effect of rumen fluid and leachate-based media on the ability of rumen and anaerobic digester derived microorganisms to degrade cellulose. The results demonstrated that rumen microorganisms are not capable of solubilising cellulose, or generating biomass, at an optimal rate when grown in leachate-based media when compared to the rates achieved when grown in rumen-based media. In contrast, the rate of biomass generation and cellulose solubilisation by digester microorganisms was not strongly affected by a change in media type. Several authors have theorised that cellulose degradation rates in anaerobic digesters can be increased by inoculation with rumen-derived microorganisms. The results from this study show that this approach is unlikely to be successful, because the rumen microorganisms would likely be unable to solubilise and out-compete native solid waste microorganisms for the cellulose in a foreign (leachate based) medium.

Comparison of cellulose solubilisation rates in rumen and landfill leachate inoculated reactors

The aim of this study was to conduct a number of controlled digestions to obtain easily comparable cellulose solubilisation rates and to compare these rates to those found in the literature to see which operational differences were significant in affecting cellulose degradation during anaerobic digestion. The results suggested that differences in volumetric cellulose solubilisation rates were not indicative of the true performance of cellulose digestion systems. When cellulose solubilisation rates were normalised by the mass of cellulose in the reactor at each time step, the comparison of the rates became more meaningful. Cellulose solubilisation was surface area limited. Therefore, changes in the loading rate of cellulose to the reactor altered the volumetric solubilisation rate without changing the mass normalised rate. Comparison of mass normalised solubilisation rates from this study and the literature demonstrated that differences in reactor configuration and operational conditions did not significantly impact on the solubilisation rate whereas the difference in composition of the microbial communities showed a marked effect. This work highlights the importance of using appropriately normalised data when making comparisons between systems with differing operational conditions.