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Takahashi K, Nakano H, Sato H. Accelerated constant-voltage quantum mechanical/molecular mechanical method for molecular systems at electrochemical interfaces. J Chem Phys 2022; 157:234107. [PMID: 36550044 DOI: 10.1063/5.0128358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/04/2022] Open
Abstract
The structure and electronic properties of a molecule at an electrochemical interface are changed by interactions with the electrode surface and the electrolyte solution, which can be significantly modulated by an applied voltage. We present an efficient self-consistent quantum mechanics/molecular mechanics (QM/MM) approach to study a physisorbed molecule at a metal electrode-electrolyte interface under the constant-voltage condition. The approach employs a classical polarizable double electrode model, which enables us to study the QM/MM system in the constant-voltage ensemble. A mean-field embedding approximation is further introduced in order to overcome the difficulties associated with statistical sampling of the electrolyte configurations. The results of applying the method to a test system indicate that the adsorbed molecule is no less or slightly more polarized at the interface than in the bulk electrolyte solution. The geometry of the horizontally adsorbed molecule is modulated by their electrostatic interactions with the polarizable electrode surfaces and also the interactions with cations attracted toward the interface when the adsorbate is reduced. We also demonstrate that the approach can be used to quantitatively evaluate the reorganization energy of a one electron reduction reaction of a molecule in an electrochemical cell.
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Affiliation(s)
- Ken Takahashi
- Department of Molecular Engineering, Kyoto University, Kyoto Daigaku Katsura, Kyoto 615-8246, Japan
| | - Hiroshi Nakano
- CD-FMat, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Umezono, Tsukuba Central 2, Tsukuba, Ibaraki 305-8568, Japan
| | - Hirofumi Sato
- Department of Molecular Engineering, Kyoto University, Kyoto Daigaku Katsura, Kyoto 615-8246, Japan
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Ramavath JN, Ramachandra C, Ramanujam K. Iron-Dicyano Dichloro Quinone Primary Battery. ChemistrySelect 2018. [DOI: 10.1002/slct.201801878] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Paul DK, Meng K, Omanovic D, Alvarez JC. Hydrogen Bonding and Proton Transfer in Aqueous Toluene Microdroplets Studied by Particle Collision Electrochemistry. ChemElectroChem 2018. [DOI: 10.1002/celc.201800542] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
- Dilip K. Paul
- Department of ChemistryVirginia Commonwealth University Richmond VA, 23284
| | - Kejie Meng
- Department of ChemistryVirginia Commonwealth University Richmond VA, 23284
| | - Dario Omanovic
- Department of Marine and Environmental ResearchRuder Boskovic Institute Zagreb Croatia
| | - Julio C. Alvarez
- Department of ChemistryVirginia Commonwealth University Richmond VA, 23284
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Li J, Bentley CL, Ueda T, Bond AM, Zhang J. Electrolyte cation dependence of the electron transfer kinetics associated with the [SVW11O40]3–/4– (VV/IV) and [SVW11O40]4–/5– (WVI/V) processes in propylene carbonate. J Electroanal Chem (Lausanne) 2018. [DOI: 10.1016/j.jelechem.2017.10.028] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Dadpou B, Nematollahi D, Sharafi-Kolkeshvandi M. Solvent effect on the electrochemical oxidation of N,N,N′,N′-tetramethyl-1,4-phenylenediamine. New insights into the correlation of electron transfer kinetics with dynamic solvent effects. J Mol Liq 2018. [DOI: 10.1016/j.molliq.2017.12.151] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Ghosh S, Horvath S, Soudackov AV, Hammes-Schiffer S. Electrochemical Solvent Reorganization Energies in the Framework of the Polarizable Continuum Model. J Chem Theory Comput 2014; 10:2091-102. [DOI: 10.1021/ct500051e] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Soumya Ghosh
- Department of Chemistry, University of Illinois at Urbana−Champaign, 600 South Mathews Avenue, Urbana, Illinois 61801, United States
| | - Samantha Horvath
- Department of Chemistry, University of Illinois at Urbana−Champaign, 600 South Mathews Avenue, Urbana, Illinois 61801, United States
| | - Alexander V. Soudackov
- Department of Chemistry, University of Illinois at Urbana−Champaign, 600 South Mathews Avenue, Urbana, Illinois 61801, United States
| | - Sharon Hammes-Schiffer
- Department of Chemistry, University of Illinois at Urbana−Champaign, 600 South Mathews Avenue, Urbana, Illinois 61801, United States
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Buda M. On calculating reorganization energies for electrochemical reactions using density functional theory and continuum solvation models. Electrochim Acta 2013. [DOI: 10.1016/j.electacta.2013.09.045] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Batchelor-McAuley C, Laborda E, Henstridge MC, Nissim R, Compton RG. Reply to comments contained in “Are the reactions of quinones on graphite adiabatic?”, by N.B. Luque, W. Schmickler [Electrochim. Acta xx (2012) yyy]. Electrochim Acta 2013. [DOI: 10.1016/j.electacta.2012.09.123] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Bao D, Ramu S, Contreras A, Upadhyayula S, Vasquez JM, Beran G, Vullev VI. Electrochemical Reduction of Quinones: Interfacing Experiment and Theory for Defining Effective Radii of Redox Moieties. J Phys Chem B 2010; 114:14467-79. [DOI: 10.1021/jp101730e] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Duoduo Bao
- Department of Bioengineering, University of California, Riverside, California 92521, Center for Bioengineering Research, University of California, Riverside, California 92521, and Department of Chemistry, University of California, Riverside, California 92521
| | - Sangeetha Ramu
- Department of Bioengineering, University of California, Riverside, California 92521, Center for Bioengineering Research, University of California, Riverside, California 92521, and Department of Chemistry, University of California, Riverside, California 92521
| | - Antonio Contreras
- Department of Bioengineering, University of California, Riverside, California 92521, Center for Bioengineering Research, University of California, Riverside, California 92521, and Department of Chemistry, University of California, Riverside, California 92521
| | - Srigokul Upadhyayula
- Department of Bioengineering, University of California, Riverside, California 92521, Center for Bioengineering Research, University of California, Riverside, California 92521, and Department of Chemistry, University of California, Riverside, California 92521
| | - Jacob M. Vasquez
- Department of Bioengineering, University of California, Riverside, California 92521, Center for Bioengineering Research, University of California, Riverside, California 92521, and Department of Chemistry, University of California, Riverside, California 92521
| | - Gregory Beran
- Department of Bioengineering, University of California, Riverside, California 92521, Center for Bioengineering Research, University of California, Riverside, California 92521, and Department of Chemistry, University of California, Riverside, California 92521
| | - Valentine I. Vullev
- Department of Bioengineering, University of California, Riverside, California 92521, Center for Bioengineering Research, University of California, Riverside, California 92521, and Department of Chemistry, University of California, Riverside, California 92521
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Costentin C, Robert M, Savéant JM. Reorganization energies and pre-exponential factors in the one-electron electrochemical and homogeneous oxidation of phenols coupled with an intramolecular amine-driven proton transfer. Phys Chem Chem Phys 2010; 12:13061-9. [DOI: 10.1039/c0cp00017e] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Pospíšil L, Teplý F, Gál M, Adriaenssens L, Horáček M, Severa L. Helquats, helical extended diquats, as fast electron transfer systems. Phys Chem Chem Phys 2010; 12:1550-6. [DOI: 10.1039/b915148f] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Comparison of fast scan voltammetry with microelectrode voltammetry of reduction of 1,4-benzoquinone. J Electroanal Chem (Lausanne) 2007. [DOI: 10.1016/j.jelechem.2007.07.021] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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VandeVondele J, Sulpizi M, Sprik M. From solvent fluctuations to quantitative redox properties of quinones in methanol and acetonitrile. Angew Chem Int Ed Engl 2007; 45:1936-8. [PMID: 16485311 DOI: 10.1002/anie.200503581] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Hammershøj P, Reenberg TK, Pittelkow M, Nielsen CB, Hammerich O, Christensen JB. Synthesis and Properties of 2,3-Dialkynyl-1,4-benzoquinones. European J Org Chem 2006. [DOI: 10.1002/ejoc.200600081] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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VandeVondele J, Sulpizi M, Sprik M. From Solvent Fluctuations to Quantitative Redox Properties of Quinones in Methanol and Acetonitrile. Angew Chem Int Ed Engl 2006. [DOI: 10.1002/ange.200503581] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Ossowski T, Pipka P, Liwo A, Jeziorek D. Electrochemical and UV-spectrophotometric study of oxygen and superoxide anion radical interaction with anthraquinone derivatives and their radical anions. Electrochim Acta 2000. [DOI: 10.1016/s0013-4686(00)00479-5] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Büschel M, Stadler C, Lambert C, Beck M, Daub J. Heterocyclic quinones as core units for redox switches: UV–vis/NIR, FTIR spectroelectrochemistry and DFT calculations on the vibrational and electronic structure of the radical anions. J Electroanal Chem (Lausanne) 2000. [DOI: 10.1016/s0022-0728(00)00037-1] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Moressi MB, Zón MA, Fernández H. Solvent effects on the heterogeneous kinetics of N,N,N′,N′-tetramethyl p-phenylendiamine (TMPD) in nonaqueous binary solvent mixtures. The role of the preferential solvation phenomenon. Electrochim Acta 2000. [DOI: 10.1016/s0013-4686(99)00317-5] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Chung TD, Kang SK, Kim J, Kim HS, Kim H. Interaction between various alkylammonium ions and quinone-derivatized calix[4]arenes in aprotic media. J Electroanal Chem (Lausanne) 1997. [DOI: 10.1016/s0022-0728(97)00100-9] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Standard electrode reaction rates of bis(biphenyl) chromium(I) in N,N-dimethylformamide. J Electroanal Chem (Lausanne) 1997. [DOI: 10.1016/s0022-0728(96)04858-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Crawford P, Carlos E, Ellegood J, Cheng C, Dong Q, Liu D, Luo Y. The electrochemistry of antineoplastic furanquinones: Electrochemical properties of benzo[b]naphtho[2,3-d]furan-6,11-dione derivatives. Electrochim Acta 1996. [DOI: 10.1016/0013-4686(96)00020-5] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Fawcett WR, Opallo M. Die Kinetik heterogener Elektronentransferreaktionen in polaren Lösungsmitteln. Angew Chem Int Ed Engl 1994. [DOI: 10.1002/ange.19941062105] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Posdorfer J, Olbrich-Stock M, Schindler R. Spatially resolved UV—VIS absorption measurements in planar, cylindrical and spherical diffusion layers. Kinetic investigations of a heterogeneous electron transfer reaction. Electrochim Acta 1994. [DOI: 10.1016/0013-4686(94)85081-x] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Fernández H, Zón MA. Solvent effects on the kinetics of heterogeneous electron transfer processes. The TMPD/TMPD·+ redox couple. J Electroanal Chem (Lausanne) 1992. [DOI: 10.1016/0022-0728(92)80353-6] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Fernandes JB, Zhang LQ, Schultz FA. Correlation of heterogeneous electron transfer rate with structural change and environmental factors in the two-electron oxidation of W2(CO)8(μ-SBz)22−. ACTA ACUST UNITED AC 1991. [DOI: 10.1016/0022-0728(91)85364-u] [Citation(s) in RCA: 28] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Study of the bielectronic electro-oxidation of N,N,N',N'-tetramethyl naphthidine (TMN) in non-aqueous medium. J Electroanal Chem (Lausanne) 1990. [DOI: 10.1016/0022-0728(90)85004-o] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Double layer effects on the enthalpy of activation of heterogeneous electron transfer reactions. ACTA ACUST UNITED AC 1990. [DOI: 10.1016/0022-0728(90)87324-d] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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The mercury-crown complexes and their interaction with quinone. J Electroanal Chem (Lausanne) 1990. [DOI: 10.1016/0022-0728(90)87426-k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Determination of the kinetic and activation parameters for the electro-oxidation of N,N,N', N'-tetramethyl-p-phenylenediamine (TMPD) in acetonitrile (ACN) by chronocoulometry and other electrochemical techniques. ACTA ACUST UNITED AC 1990. [DOI: 10.1016/0022-0728(90)87394-y] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Corrigan DA, H. Evans D. Solvent effects of heterogeneous electron transfer rates for organic redox couples: tert-nitrobutane reduction at mercury. ACTA ACUST UNITED AC 1987. [DOI: 10.1016/0022-0728(87)85013-1] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Grampp G, Jaenicke W. ESR-spectroscopic investigation of the parallel electron and proton exchange between quinones and their radicals. ACTA ACUST UNITED AC 1987. [DOI: 10.1016/0022-0728(87)85147-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Petersen RA, Evans DH. Heterogeneous electron transfer kinetics for a variety of organic electrode reactions at the mercury-acetonitrile interface using either tetraethylammonium perchlorate or tetraheptylammonium perchlorate electrolyte. ACTA ACUST UNITED AC 1987. [DOI: 10.1016/0022-0728(87)80282-6] [Citation(s) in RCA: 68] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Keita B, Nadjo L. Heterogeneous one-electron exchange of silicotungstic heteropolyanion in dimethylformamide. ACTA ACUST UNITED AC 1987. [DOI: 10.1016/0022-0728(87)85053-2] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Khoo S, Foley JK, Pons S. Electrolyte effects on the cyclic voltammetry of TCNQ and TCNE. ACTA ACUST UNITED AC 1986. [DOI: 10.1016/0022-0728(86)87021-8] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Rate constants of the electrode reactions of some quinones in hexamethylphosphoramide solutions at mercury electrodes. ACTA ACUST UNITED AC 1986. [DOI: 10.1016/0022-0728(86)90100-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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