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Risva M, Tsigoias S, Boghosian S, Kaziannis S, Kalampounias AG. Exploring the influence of urea on the proton-transfer reaction in aqueous amine solutions with Raman and ultrasonic relaxation spectroscopy. Mol Phys 2023. [DOI: 10.1080/00268976.2022.2163314] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- M. Risva
- Department of Chemistry, University of Ioannina, Ioannina, Greece
| | - S. Tsigoias
- Department of Chemistry, University of Ioannina, Ioannina, Greece
| | - S. Boghosian
- Department of Chemical Engineering, University of Patras, Patras, Greece
| | - S. Kaziannis
- Department of Physics, University of Ioannina, Ioannina, Greece
| | - A. G. Kalampounias
- Department of Chemistry, University of Ioannina, Ioannina, Greece
- Institute of Materials Science and Computing, University Research Center of Ioannina (URCI), Ioannina, Greece
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Moses Abraham B, Adivaiah B, Vaitheeswaran G. Microscopic origin of pressure-induced phase-transitions in urea: a detailed investigation through first principles calculations. Phys Chem Chem Phys 2019; 21:884-900. [PMID: 30560262 DOI: 10.1039/c8cp04827d] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
The potential crystal structures and properties of urea as a function of pressure were studied using ab initio based electronic structure calculations. The enthalpy-pressure behavior shows that urea undergoes a pressure induced structural phase transition from P4[combining macron]21m (phase I) → P212121 (phase III) at 0.66 GPa with a volume collapse of 4.83%, driven by softening of the acoustic mode along the Γ-X direction. Another phase transition from the P212121 → P21212 structure was identified at 3.09 GPa. The violation of Born stability criteria in the P212121 structure along with softening of the acoustic mode in the U-R direction was responsible for the pressure induced phase transition. Furthermore, the application of pressure led to the breaking and formation of N-HO bonds in the crystal structure of urea during the phase transition, i.e., the H-acceptor capacitance of the oxygen atoms was varied between phases I/IV and -III. Band structure calculations were performed using a hybrid functional (Heyd, Scuseria and Ernzerhof, HSE) which includes a part of exact Fock-exchange. The computed electronic band structure showed that the urea polymorphs are insulators with a direct band gap of 6.21, 6.85 and 6.99 eV for phase-I, -III and -IV, respectively, at selected pressures. We have also presented the dielectric functions (real (ε1(ω)) and imaginary (ε2(ω)) parts), refractive index and absorption coefficients to explore the optical characteristics of the urea phases. The geometric interpretation of intermolecular interactions were quantitatively visualized using Hirshfeld surface analysis. Our results provide a complete picture of various properties of urea polymorphs that lay the foundation for further understanding of structures and their applications.
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Affiliation(s)
- B Moses Abraham
- Advanced Centre of Research in High Energy Materials (ACRHEM), University of Hyderabad, Prof. C. R. Rao Road, Gachibowli, Hyderabad-500046, Telangana, India.
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Rapid and Quantitative Determination of Soil Water-Soluble Nitrogen Based on Surface-Enhanced Raman Spectroscopy Analysis. APPLIED SCIENCES-BASEL 2018. [DOI: 10.3390/app8050701] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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4
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Reconsideration of Dielectric Relaxation of Aqueous Urea Solutions at Different Temperatures. J SOLUTION CHEM 2016. [DOI: 10.1007/s10953-016-0458-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Joshi RM. Bond Energy Scheme for Estimating Heats of Formation of Monomers and Polymers. VII. Nitrogen Compounds. ACTA ACUST UNITED AC 2006. [DOI: 10.1080/00222338208077206] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Rousseau B, Van Alsenoy C, Keuleers R, Desseyn HO. Solids Modeled by Ab-Initio Crystal Field Methods. Part 17. Study of the Structure and Vibrational Spectrum of Urea in the Gas Phase and in Its P4̄21m Crystal Phase. J Phys Chem A 1998. [DOI: 10.1021/jp981008m] [Citation(s) in RCA: 75] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Bourke JP, Karu E, Cannon RD. Kinetics of Formation and Dissociation of [Cr(3)O(O(2)CCH(3))(6)(urea)(3)](+): An Example of Statistically Controlled Kinetics and Equilibrium. Inorg Chem 1996; 35:1577-1581. [PMID: 11666376 DOI: 10.1021/ic9505561] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Kinetics of the overall reaction [Cr(3)O(O(2)CCH(3))(6)(H(2)O)(3)](+) + 3 urea right harpoon over left harpoon [Cr(3)O(O(2)CCH(3))(6)(urea)(3)](+) + 3H(2)O have been studied spectrophotometrically. Monophasic kinetics were observed in both directions. The reverse steps, of urea dissociation, were monitored using an analytical technique which permits direct determination of the concentration of liberated urea and does not require knowledge of extinction coefficients of intermediate species. Results imply that consecutive steps occur with rate constants in close to the statistical ratios of k(1):k(2):k(3) = 3:2:1 and k(-)(1):k(-)(2):k(-)(3) = 1:2:3. Rates indicate strong labilization of urea, compared to the case of mononuclear complex [Cr(urea)(6)](3+).
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Affiliation(s)
- John P. Bourke
- School of Chemical Sciences, University of East Anglia, Norwich NR4 7TJ, U.K
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El-Eswed BI, Zughul MB, Derwish GAW. Crown ether molecular complexes with urea and thiourea. J INCL PHENOM MACRO 1996. [DOI: 10.1007/bf01041117] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Langer J, Schrader B, Bastian V, Jacob E. Infrared spectra and force constants of urea in the gaseous phase. ACTA ACUST UNITED AC 1995. [DOI: 10.1007/bf00323373] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Balfour WJ, Fougere SG, Klapstein D, Nau WM. The infrared and Raman spectra of carbonyl diisocyanate. ACTA ACUST UNITED AC 1994. [DOI: 10.1016/0584-8539(94)80025-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Ha TK, Puebla C. A theoretical study of conformations and vibrational frequencies in (NH2)2C=X compounds (X=O, S, and Se). Chem Phys 1994. [DOI: 10.1016/0301-0104(94)85013-5] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Vijay A, Sathyanarayana D. Ab initio study of the force field, geometry and vibrational assignment of urea. J Mol Struct 1993. [DOI: 10.1016/0022-2860(93)85024-o] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Byler D, Gerasimowicz WV, Stockette VM, Eberl DD. Infrared spectroscopic examination of the interaction of urea with the naturally occurring zeolite clinoptilolite. Microchem J 1991. [DOI: 10.1016/0026-265x(91)90090-c] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Derreumaux P, Vergoten G, Lagant P. A vibrational molecular force field of model compounds with biological interest. I. Harmonic dynamics of crystalline urea at 123 K. J Comput Chem 1990. [DOI: 10.1002/jcc.540110504] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Holze R, Schomaker S. New results on the electrosorption of urea and thiourea on gold electrodes. Electrochim Acta 1990. [DOI: 10.1016/0013-4686(90)87053-5] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Panja PK, Sankar Bala S, Ghosh PN. Vibrational spectra of thiourea and N-methyl thiourea at low temperature: effect of hydrogen bonding and methylation. J Mol Struct 1988. [DOI: 10.1016/0022-2860(88)80241-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Sankar Bala S, Panja PK, Ghosh PN. Vibrational spectra of acetamide and thioacetamide at low temperature: Fermi resonance and hydrogen bond studies. J Mol Struct 1987. [DOI: 10.1016/0022-2860(87)87042-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Li X, Stotesbury SJ, Jayasooriya UA. Infrared spectra of urea isolated in a solid argon matrix. ACTA ACUST UNITED AC 1987. [DOI: 10.1016/s0584-8539(87)80054-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Byler D, Susi H, Damert WC. Relation between force constant and bond length for carbon—nitrogen bonds. ACTA ACUST UNITED AC 1987. [DOI: 10.1016/0584-8539(87)80231-3] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Arenas J, Marquez F, Cardenet A. Force Field for out-of-plane B1 vibrations of urea and thiourea. ACTA ACUST UNITED AC 1984. [DOI: 10.1016/0584-8539(84)80131-2] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Annamalai A, Singh S. Force field calculations for formamide, acetamide, and urea using the CNDO/force method. J Chem Phys 1982. [DOI: 10.1063/1.443902] [Citation(s) in RCA: 24] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Espinosa-Müller A, Bravo A. An extended version of Boyd's force field method applicable to heteroatomic molecules. J Mol Struct 1982. [DOI: 10.1016/0022-2860(82)90219-8] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Geetharani K, Sathyanarayana D. Infrared spectral assignments for transition metal thioxanthates. ACTA ACUST UNITED AC 1974. [DOI: 10.1016/0584-8539(74)80067-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Walter W, Stäglich P. Ramanspektren und Normalkoordinatenanalysen von Thioacetamid und Thioacetamid-S-oxid. ACTA ACUST UNITED AC 1974. [DOI: 10.1016/0584-8539(74)80125-x] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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