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Doppler imaging detects bacterial infection of living tissue. Commun Biol 2021; 4:178. [PMID: 33568744 PMCID: PMC7876006 DOI: 10.1038/s42003-020-01550-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2020] [Accepted: 11/25/2020] [Indexed: 01/17/2023] Open
Abstract
Living 3D in vitro tissue cultures, grown from immortalized cell lines, act as living sentinels as pathogenic bacteria invade the tissue. The infection is reported through changes in the intracellular dynamics of the sentinel cells caused by the disruption of normal cellular function by the infecting bacteria. Here, the Doppler imaging of infected sentinels shows the dynamic characteristics of infections. Invasive Salmonella enterica serovar Enteritidis and Listeria monocytogenes penetrate through multicellular tumor spheroids, while non-invasive strains of Escherichia coli and Listeria innocua remain isolated outside the cells, generating different Doppler signatures. Phase distributions caused by intracellular transport display Lévy statistics, introducing a Lévy-alpha spectroscopy of bacterial invasion. Antibiotic treatment of infected spheroids, monitored through time-dependent Doppler shifts, can distinguish drug-resistant relative to non-resistant strains. This use of intracellular Doppler spectroscopy of living tissue sentinels opens a new class of microbial assay with potential importance for studying the emergence of antibiotic resistance. Honggu Choi et al. use biodynamic Doppler imaging to monitor bacterial infection of 3D living tissue and describe changes in the intracellular motions of living host tissue induced by early-stage infection. This work demonstrates the potential for the clinical use of this method to test for antibiotic-resistant infections.
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Li Z, Sun H, Turek J, Jalal S, Childress M, Nolte DD. Doppler fluctuation spectroscopy of intracellular dynamics in living tissue. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2019; 36:665-677. [PMID: 31044988 PMCID: PMC6791373 DOI: 10.1364/josaa.36.000665] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2018] [Accepted: 03/01/2019] [Indexed: 05/26/2023]
Abstract
Intracellular dynamics in living tissue are dominated by active transport driven by bioenergetic processes far from thermal equilibrium. Intracellular constituents typically execute persistent walks. In the limit of long mean free paths, the persistent walks are ballistic, exhibiting a "Doppler edge" in light scattering fluctuation spectra. At shorter transport lengths, the fluctuations are described by lifetime-broadened Doppler spectra. Dynamic light scattering from transport in the ballistic, diffusive, or the crossover regimes is derived analytically, including the derivation of autocorrelation functions through a driven damped harmonic oscillator analog for light scattering from persistent walks. The theory is validated through Monte Carlo simulations. Experimental evidence for the Doppler edge in three-dimensional (3D) living tissue is obtained using biodynamic imaging based on low-coherence interferometry and digital holography.
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Affiliation(s)
- Zhe Li
- Department of Physics and Astronomy, Purdue University, 525 Northwestern Ave, West Lafayette, Indiana 47907, USA
| | - Hao Sun
- Department of Physics and Astronomy, Purdue University, 525 Northwestern Ave, West Lafayette, Indiana 47907, USA
| | - John Turek
- Department of Basic Medical Sciences, Purdue University, 625 Harrison Street, West Lafayette, Indiana 47907, USA
| | - Shadia Jalal
- Department of Medicine, IU School of Medicine, 535 Barnhill Drive, Indianapolis, Indiana 46202, USA
| | - Michael Childress
- Department of Veterinary Clinical Sciences, Purdue University 625 Harrison Street, West Lafayette, Indiana 47907, USA
| | - David D. Nolte
- Department of Physics and Astronomy, Purdue University, 525 Northwestern Ave, West Lafayette, Indiana 47907, USA
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Choi H, Li Z, Sun H, Merrill D, Turek J, Childress M, Nolte D. Biodynamic digital holography of chemoresistance in a pre-clinical trial of canine B-cell lymphoma. BIOMEDICAL OPTICS EXPRESS 2018; 9:2214-2228. [PMID: 29760982 PMCID: PMC5946783 DOI: 10.1364/boe.9.002214] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2018] [Revised: 04/05/2018] [Accepted: 04/06/2018] [Indexed: 05/08/2023]
Abstract
Biodynamic digital holography was used to obtain phenotypic profiles of canine non-Hodgkin B-cell lymphoma biopsies treated with standard-of-care chemotherapy. Biodynamic signatures from the living 3D tissues were extracted using fluctuation spectroscopy from intracellular Doppler light scattering in response to the molecular mechanisms of action of therapeutic drugs that modify a range of internal cellular motions. The standard-of-care to treat B-cell lymphoma in both humans and dogs is a combination CHOP therapy that consists of doxorubicin, prednisolone, cyclophosphamide and vincristine. The proportion of dogs experiencing durable cancer remission following CHOP chemotherapy was 68%, with 13 out of 19 dogs responding favorably to therapy and 6 dogs failing to have progression-free survival times greater than 100 days. Biodynamic signatures were found that correlate with inferior survival times, and biomarker selection was optimized to identify specific Doppler signatures related to chemoresistance. A machine learning classifier was constructed based on feature vector correlations and linear separability in high-dimensional feature space. Hold-out validation predicted patient response to therapy with 84% accuracy. These results point to the potential for biodynamic profiling to contribute to personalized medicine by aiding the selection of chemotherapy for cancer patients.
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Affiliation(s)
- Honggu Choi
- Department of Physics and Astronomy, Purdue University, 525 Northwestern Ave, West Lafayette, IN 47907, USA
| | - Zhe Li
- Department of Physics and Astronomy, Purdue University, 525 Northwestern Ave, West Lafayette, IN 47907, USA
| | - Hao Sun
- Department of Physics and Astronomy, Purdue University, 525 Northwestern Ave, West Lafayette, IN 47907, USA
| | - Dan Merrill
- Department of Physics and Astronomy, Purdue University, 525 Northwestern Ave, West Lafayette, IN 47907, USA
| | - John Turek
- College of Veterinary Medicine Purdue University, 625 Harrison St, West Lafayette, IN 47907, USA
| | - Michael Childress
- College of Veterinary Medicine Purdue University, 625 Harrison St, West Lafayette, IN 47907, USA
| | - David Nolte
- Department of Physics and Astronomy, Purdue University, 525 Northwestern Ave, West Lafayette, IN 47907, USA
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Sun H, Merrill D, An R, Turek J, Matei D, Nolte DD. Biodynamic imaging for phenotypic profiling of three-dimensional tissue culture. JOURNAL OF BIOMEDICAL OPTICS 2017; 22:16007. [PMID: 28301634 PMCID: PMC5221565 DOI: 10.1117/1.jbo.22.1.016007] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2016] [Accepted: 11/28/2016] [Indexed: 05/04/2023]
Abstract
Three-dimensional (3-D) tissue culture represents a more biologically relevant environment for testing new drugs compared to conventional two-dimensional cancer cell culture models. Biodynamic imaging is a high-content 3-D optical imaging technology based on low-coherence interferometry and digital holography that uses dynamic speckle as high-content image contrast to probe deep inside 3-D tissue. Speckle contrast is shown to be a scaling function of the acquisition time relative to the persistence time of intracellular transport and hence provides a measure of cellular activity. Cellular responses of 3-D multicellular spheroids to paclitaxel are compared among three different growth techniques: rotating bioreactor (BR), hanging-drop (HD), and nonadherent (U-bottom, UB) plate spheroids, compared with ex vivo living tissues. HD spheroids have the most homogeneous tissue, whereas BR spheroids display large sample-to-sample variability as well as spatial heterogeneity. The responses of BR-grown tumor spheroids to paclitaxel are more similar to those of ex vivo biopsies than the responses of spheroids grown using HD or plate methods. The rate of mitosis inhibition by application of taxol is measured through tissue dynamics spectroscopic imaging, demonstrating the ability to monitor antimitotic chemotherapy. These results illustrate the potential use of low-coherence digital holography for 3-D pharmaceutical screening applications.
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Affiliation(s)
- Hao Sun
- Purdue University, Department of Physics, 525 Northwestern Avenue, West Lafayette, Indiana 47907, United States
| | - Daniel Merrill
- Purdue University, Department of Physics, 525 Northwestern Avenue, West Lafayette, Indiana 47907, United States
| | - Ran An
- Animated Dynamics, Inc., 5770 Decatur Boulevard Suite A, Indianapolis, Indiana 46241, United States
| | - John Turek
- Purdue University, Department of Basic Medical Sciences, West Lafayette, 625 Harrison Street, Indiana 47907, United States
| | - Daniela Matei
- Northwestern University School of Medicine, 303 East SuperiorChicago, Illinois 60611, United States
| | - David D. Nolte
- Purdue University, Department of Physics, 525 Northwestern Avenue, West Lafayette, Indiana 47907, United States
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Compressive stress induces dephosphorylation of the myosin regulatory light chain via RhoA phosphorylation by the adenylyl cyclase/protein kinase A signaling pathway. PLoS One 2015; 10:e0117937. [PMID: 25734240 PMCID: PMC4348516 DOI: 10.1371/journal.pone.0117937] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2014] [Accepted: 01/05/2015] [Indexed: 01/22/2023] Open
Abstract
Mechanical stress that arises due to deformation of the extracellular matrix (ECM) either stretches or compresses cells. The cellular response to stretching has been actively studied. For example, stretching induces phosphorylation of the myosin regulatory light chain (MRLC) via the RhoA/RhoA-associated protein kinase (ROCK) pathway, resulting in increased cellular tension. In contrast, the effects of compressive stress on cellular functions are not fully resolved. The mechanisms for sensing and differentially responding to stretching and compressive stress are not known. To address these questions, we investigated whether phosphorylation levels of MRLC were affected by compressive stress. Contrary to the response in stretching cells, MRLC was dephosphorylated 5 min after cells were subjected to compressive stress. Compressive loading induced activation of myosin phosphatase mediated via the dephosphorylation of myosin phosphatase targeting subunit 1 (Thr853). Because myosin phosphatase targeting subunit 1 (Thr853) is phosphorylated only by ROCK, compressive loading may have induced inactivation of ROCK. However, GTP-bound RhoA (active form) increased in response to compressive stress. The compression-induced activation of RhoA and inactivation of its effector ROCK are contradictory. This inconsistency was due to phosphorylation of RhoA (Ser188) that reduced affinity of RhoA to ROCK. Treatment with the inhibitor of protein kinase A that phosphorylates RhoA (Ser188) induced suppression of compression-stimulated MRLC dephosphorylation. Incidentally, stretching induced phosphorylation of MRLC, but did not affect phosphorylation levels of RhoA (Ser188). Together, our results suggest that RhoA phosphorylation is an important process for MRLC dephosphorylation by compressive loading, and for distinguishing between stretching and compressing cells.
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Fediuk J, Dakshinamurti S. A role for actin polymerization in persistent pulmonary hypertension of the newborn. Can J Physiol Pharmacol 2015; 93:185-94. [PMID: 25695400 DOI: 10.1139/cjpp-2014-0413] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Persistent pulmonary hypertension of the newborn (PPHN) is defined as the failure of normal pulmonary vascular relaxation at birth. Hypoxia is known to impede postnatal disassembly of the actin cytoskeleton in pulmonary arterial myocytes, resulting in elevation of smooth muscle α-actin and γ-actin content in elastic and resistance pulmonary arteries in PPHN compared with age-matched controls. This review examines the original histological characterization of PPHN with attention to cytoskeletal structural remodeling and actin isoform abundance, reviews the existing evidence for understanding the biophysical and biochemical forces at play during neonatal circulatory transition, and specifically addresses the role of the cortical actin architecture, primarily identified as γ-actin, in the transduction of mechanical force in the hypoxic PPHN pulmonary circuit.
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Affiliation(s)
- Jena Fediuk
- Biology of Breathing Group, Manitoba Institute of Child Health, 715 McDermot Avenue, Winnipeg, MB R3E 3P4, Canada., Department of Physiology, University of Manitoba, Winnipeg, Manitoba, Canada
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