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Dekir A, Berredjem M, Benzaid C, Djouad SE, Iqbal N, Laichi Y, Bachari K, Bhat AR, Bouzina A, Aissaoui M, Bouchareb F. Novel N-acylsulfonamides: Synthesis, in silico prediction, molecular docking dynamic simulation, antimicrobial and anti-inflammatory activities. J Biomol Struct Dyn 2023; 41:9232-9244. [PMID: 37897194 DOI: 10.1080/07391102.2022.2148751] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Accepted: 11/12/2022] [Indexed: 11/29/2022]
Abstract
Microbial resistance to drugs currently traded in the market is a serious problem in modern medicine. In this field of research, we synthesized a novel N-acylsulfonamides (NAS) derivatives starting from commercially available compounds; morpholine, isocyanate of chlorosulfonyl and alcohols. The in vitro antimicrobial potential of synthesized compounds was screened against 04 Gram-negative bacteria; Escherichia coli, Pseudomonas aeruginosa, Klebsiella pneumoniae, Acinetobacter baumannii, 02 Gram-positive bacteria: Streptococcus sp, Staphylococcus aureus and 07 yeasts and fungi: Candida albicans, Candida spp, Penicillum spp, Aspegillus sp, Aspergillus flavus, Fusarium sp, and Cladosporium spp. The results of inhibition growth were compared with standard antimicrobial drugs with the goal of exploring their potential antimicrobial activity. In addition, the anti-inflammatory activity of the synthesized compounds was determined in-vitro by protein denaturation method. The obtained bioactivity results were further validated by in silico DFT (Density Functional Theory), ADME (Absorption-Distribution-Métabolisation-Excrétion), molecular docking studies and molecular dynamics simulations.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Ali Dekir
- Laboratory of Applied Organic Chemistry LCOA, Synthesis of Biomolecules and Molecular Modelling Group, Badji-Mokhtar - Annaba University, Annaba, Algeria
| | - Malika Berredjem
- Laboratory of Applied Organic Chemistry LCOA, Synthesis of Biomolecules and Molecular Modelling Group, Badji-Mokhtar - Annaba University, Annaba, Algeria
| | - Chahrazed Benzaid
- Laboratory of Applied Organic Chemistry LCOA, Synthesis of Biomolecules and Molecular Modelling Group, Badji-Mokhtar - Annaba University, Annaba, Algeria
| | - Seif-Eddine Djouad
- Laboratory of Applied Organic Chemistry LCOA, Synthesis of Biomolecules and Molecular Modelling Group, Badji-Mokhtar - Annaba University, Annaba, Algeria
- Laboratory of Therapeutic Chemistry of Hospitalo-University Center Benflis Touhami Batna, Batna, Algeria
| | - Nasir Iqbal
- Department of Bioinformatics, The Islamia University of Bahawalpur, Bahawalpur, Pakistan
| | - Yacine Laichi
- Centre de Recherche Scientifique et Technique en Analyses Physico-chimiques (CRAPC), Bou-Ismail, Algeria
| | - Khaldoun Bachari
- Centre de Recherche Scientifique et Technique en Analyses Physico-chimiques (CRAPC), Bou-Ismail, Algeria
| | | | - Abdeslem Bouzina
- Laboratory of Applied Organic Chemistry LCOA, Synthesis of Biomolecules and Molecular Modelling Group, Badji-Mokhtar - Annaba University, Annaba, Algeria
| | - Mohamed Aissaoui
- Laboratory of Applied Organic Chemistry LCOA, Synthesis of Biomolecules and Molecular Modelling Group, Badji-Mokhtar - Annaba University, Annaba, Algeria
| | - Fouzia Bouchareb
- Laboratory of Applied Organic Chemistry LCOA, Synthesis of Biomolecules and Molecular Modelling Group, Badji-Mokhtar - Annaba University, Annaba, Algeria
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2
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Guerfi M, Berredjem M, Dekir A, Bahadi R, Djouad SE, Sothea TO, Redjemia R, Belhani B, Boussaker M. Anticancer activity, DFT study, ADMET prediction, and molecular docking of novel α-sulfamidophosphonates. Mol Divers 2023:10.1007/s11030-023-10630-w. [PMID: 37010709 DOI: 10.1007/s11030-023-10630-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2023] [Accepted: 03/09/2023] [Indexed: 04/04/2023]
Abstract
A series of novel α-sulfamidophosphonate derivatives (3a-3 g) were synthesized and evaluated for anticancer activity against different human cancer cell lines (PRI, K562, and JURKAT). The antitumor activity of all compounds using the MTT test remains moderate compared to the standard drug chlorambucil. Compounds 3c and 3 g were found to be more active anticancer agent against PRI and K562 cells with IC50 value 0.056-0.097 and 0.182-0.133 mM, respectively. Molecular docking study related to binding affinity and binding mode analysis showed that synthesized compounds had potential to inhibit glutamate carboxypeptidase II (GCPII). Furthermore, computational analysis was performed through Density Functional Theory (DFT) utilizing the B3LYP 6-31 G (d, p) basis set and the theoretical results were correlated with experimental data. The ADME/toxicity analyses carried out by Swiss ADME and OSIRIS software show that all synthesized molecules exhibited good pharmacokinetics, bioavailability, and had no toxicity profile.
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Affiliation(s)
- Meriem Guerfi
- Chemistry Department, Laboratory of Applied Organic Chemistry, Synthesis of Biomolecules and Molecular Modelling Group, Sciences Faculty, Badji-Mokhtar Annaba University, Box 12, 23000, Annaba, Algeria
| | - Malika Berredjem
- Chemistry Department, Laboratory of Applied Organic Chemistry, Synthesis of Biomolecules and Molecular Modelling Group, Sciences Faculty, Badji-Mokhtar Annaba University, Box 12, 23000, Annaba, Algeria.
| | - Ali Dekir
- Chemistry Department, Laboratory of Applied Organic Chemistry, Synthesis of Biomolecules and Molecular Modelling Group, Sciences Faculty, Badji-Mokhtar Annaba University, Box 12, 23000, Annaba, Algeria
| | - Rania Bahadi
- Chemistry Department, Laboratory of Applied Organic Chemistry, Synthesis of Biomolecules and Molecular Modelling Group, Sciences Faculty, Badji-Mokhtar Annaba University, Box 12, 23000, Annaba, Algeria
| | - Seif-Eddine Djouad
- Chemistry Department, Laboratory of Applied Organic Chemistry, Synthesis of Biomolecules and Molecular Modelling Group, Sciences Faculty, Badji-Mokhtar Annaba University, Box 12, 23000, Annaba, Algeria
- Laboratory of Therapeutic Chemistry of Hospitalo-University Center Benflis Touhami, Batna, Algeria
| | - Tan Ouk Sothea
- Laboratoire Peirene, EA7500 Université de Limoges, 123 Avenue Albert Thomas, 87000, Limoges Cedex, France
| | - Rayenne Redjemia
- Chemistry Department, Laboratory of Applied Organic Chemistry, Synthesis of Biomolecules and Molecular Modelling Group, Sciences Faculty, Badji-Mokhtar Annaba University, Box 12, 23000, Annaba, Algeria
| | - Billel Belhani
- Chemistry Department, Laboratory of Applied Organic Chemistry, Synthesis of Biomolecules and Molecular Modelling Group, Sciences Faculty, Badji-Mokhtar Annaba University, Box 12, 23000, Annaba, Algeria
| | - Meriem Boussaker
- Chemistry Department, Laboratory of Applied Organic Chemistry, Synthesis of Biomolecules and Molecular Modelling Group, Sciences Faculty, Badji-Mokhtar Annaba University, Box 12, 23000, Annaba, Algeria
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Bechlem K, Berredjem M, Djouad SE, Sothea TO, Bouacida S, Marminon C, Hadda TB, Lebreton J, Bouzina A. Novel N-acylsulfamoyl-oxazolidin-2ones: Synthesis, antitumor activity, X-ray crystallographic study, molecular docking and POM analyses. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.132935] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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4
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Yang W, Feng Q, Peng Z, Wang G. An overview on the synthetic urease inhibitors with structure-activity relationship and molecular docking. Eur J Med Chem 2022; 234:114273. [PMID: 35305460 DOI: 10.1016/j.ejmech.2022.114273] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Revised: 03/04/2022] [Accepted: 03/08/2022] [Indexed: 01/06/2023]
Abstract
Urease is a kind of enzyme which could be found in various bacteria, fungi, plants, and algae, which can quickly catalyze the hydrolysis of urea into ammonia and carbon dioxide. With the ammonia concentration increasing, the activity of Helicobacter pylori has got an obvious enhancement and leads to mucosal damage in the stomach, gastroduodenal infection, peptic ulcers, and gastric cancer. The infectious diseases caused by Helicobacter pylori can be controlled to a certain extent by inhibiting urease activity with urease inhibitors. Hence, studies of urease inhibitors have attracted great attention all over the world and a variety of effective urease inhibitors have been synthesized in recent years. In this review, we will draw summaries for these inhibitors including urease inhibitory activity, inhibition kinetics, structure-activity relationship, and molecular docking. The collected information is expected to provide rational guidance and effective strategy to develop novel, potent, and safe urease inhibitors for better practical applications in the future.
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Affiliation(s)
- Wei Yang
- State Key Laboratory of Functions and Applications of Medicinal Plants, Guizhou Provincial Key Laboratory of Pharmaceutics, Guizhou Medical University, Guiyang, China; Teaching and Research Section of Natural Medicinal Chemistry, School of Pharmacy, Guizhou Medical University, Guiyang, China
| | - Qianqian Feng
- State Key Laboratory of Functions and Applications of Medicinal Plants, Guizhou Provincial Key Laboratory of Pharmaceutics, Guizhou Medical University, Guiyang, China; Teaching and Research Section of Natural Medicinal Chemistry, School of Pharmacy, Guizhou Medical University, Guiyang, China
| | - Zhiyun Peng
- Office of Drug Clinical Trial Institutions, The Affiliated Hospital of Guizhou Medical University, Guiyang, China.
| | - Guangcheng Wang
- State Key Laboratory of Functions and Applications of Medicinal Plants, Guizhou Provincial Key Laboratory of Pharmaceutics, Guizhou Medical University, Guiyang, China; Engineering Research Center for the Development and Application of Ethnic Medicine and TCM (Ministry of Education), Guizhou Medical University, Guiyang, China.
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Antitumor activity, X-Ray crystallography, in silico study of some-sulfamido-phosphonates. Identification of pharmacophore sites. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.131886] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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Othman IM, Mahross MH, Gad-Elkareem MA, Rudrapal M, Gogoi N, Chetia D, Aouadi K, Snoussi M, Kadri A. Toward a treatment of antibacterial and antifungal infections: Design, synthesis and in vitro activity of novel arylhydrazothiazolylsulfonamides analogues and their insight of DFT, docking and molecular dynamic simulations. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.130862] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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Guerfi M, Berredjem M, Bahadi R, Djouad SE, Bouzina A, Aissaoui M. An efficient synthesis, characterization, DFT study and molecular docking of novel sulfonylcycloureas. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.130327] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
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8
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Shershov VE, Kuznetsova VE, Miftakhov RA, Lapa SA, Stomahin AA, Timofeev EN, Grechishnikova IV, Zasedatelev AS, Chudinov AV. Derivatization of a rigid meso-substituted heptamethine cyanine dye. MENDELEEV COMMUNICATIONS 2021. [DOI: 10.1016/j.mencom.2021.01.021] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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9
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Novel α-sulfamidophosphonate analogues of fotemustine: efficient synthesis using ultrasound under solvent-free conditions. MONATSHEFTE FUR CHEMIE 2020. [DOI: 10.1007/s00706-020-02711-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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Bouzina A, Grib I, Bechlem K, Belhani B, Aouf NE, Berredjem M. Efficient synthesis of novel N-acylsulfonamide oxazolidin-2-ones derivatives. KARBALA INTERNATIONAL JOURNAL OF MODERN SCIENCE 2016. [DOI: 10.1016/j.kijoms.2016.02.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022] Open
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BOUCHAREB FOUZIA, BERREDJEM MALIKA, KAKI SAMIRAAIT, BOUARICHA AMEL, BOUZINA ABDESLEM, BELHANI BILLEL, AOUF NOUREDDINE. Synthesis and antibacterial activity of new chiral N-sulfamoyloxazolidin-2-ones. J CHEM SCI 2015. [DOI: 10.1007/s12039-015-1004-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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12
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Noreen M, Rasool N, Gull Y, Zubair M, Mahmood T, Ayub K, Nasim FUH, Yaqoob A, Zia-Ul-Haq M, de Feo V. Synthesis, Density Functional Theory (DFT), Urease Inhibition and Antimicrobial Activities of 5-Aryl Thiophenes Bearing Sulphonylacetamide Moieties. Molecules 2015; 20:19914-28. [PMID: 26556326 PMCID: PMC6332040 DOI: 10.3390/molecules201119661] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2015] [Revised: 10/15/2015] [Accepted: 10/23/2015] [Indexed: 11/24/2022] Open
Abstract
A variety of novel 5-aryl thiophenes 4a–g containing sulphonylacetamide (sulfacetamide) groups were synthesized in appreciable yields via Pd[0] Suzuki cross coupling reactions. The structures of these newly synthesized compounds were determined using spectral data and elemental analysis. Density functional theory (DFT) studies were performed using the B3LYP/6-31G (d, p) basis set to gain insight into their structural properties. Frontier molecular orbital (FMOs) analysis of all compounds 4a–g was computed at the same level of theory to get an idea about their kinetic stability. The molecular electrostatic potential (MEP) mapping over the entire stabilized geometries of the molecules indicated the reactive sites. First hyperpolarizability analysis (nonlinear optical response) were simulated at the B3LYP/6-31G (d, p) level of theory as well. The compounds were further evaluated for their promising antibacterial and anti-urease activities. In this case, the antibacterial activities were estimated by the agar well diffusion method, whereas the anti-urease activities of these compounds were determined using the indophenol method by quantifying the evolved ammonia produced. The results revealed that all the sulfacetamide derivatives displayed antibacterial activity against Bacillus subtiles, Escherichia coli, Staphylococcus aureus, Shigella dysenteriae, Salmonella typhae, Pseudomonas aeruginosa at various concentrations. Furthermore, the compound 4gN-((5-(4-chlorophenyl)thiophen-2-yl)sulfonyl) acetamide showed excellent urease inhibition with percentage inhibition activity ~46.23 ± 0.11 at 15 µg/mL with IC50 17.1 µg/mL. Moreover, some other compounds 4a–f also exhibited very good inhibition against urease enzyme.
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Affiliation(s)
- Mnaza Noreen
- Department of Chemistry, Government College University Faisalabad, Faisalabad 38000, Pakistan.
| | - Nasir Rasool
- Department of Chemistry, Government College University Faisalabad, Faisalabad 38000, Pakistan.
| | - Yasmeen Gull
- Department of Chemistry, Government College University Faisalabad, Faisalabad 38000, Pakistan.
| | - Muhammad Zubair
- Department of Chemistry, Government College University Faisalabad, Faisalabad 38000, Pakistan.
| | - Tariq Mahmood
- Department of Chemistry, COMSATS Institute of Information Technology, University Road, Tobe Camp, Abbottabad 22060, Pakistan.
| | - Khurshid Ayub
- Department of Chemistry, COMSATS Institute of Information Technology, University Road, Tobe Camp, Abbottabad 22060, Pakistan.
| | - Faiz-Ul-Hassan Nasim
- Department of Chemistry, The Islamia University of Bahawalpur, Bahawalpur 63000, Pakistan.
| | - Asma Yaqoob
- Department of Chemistry, The Islamia University of Bahawalpur, Bahawalpur 63000, Pakistan.
| | | | - Vincenzo de Feo
- Department of Pharmaceutical and Biomedical Sciences, University of Salerno, Via Ponte don Melillo, Fisciano (Salerno) I-84084, Italy.
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Belhani B, Berredjem M, Le Borgne M, Bouaziz Z, Lebreton J, Aouf NE. A one-pot three-component synthesis of novel α-sulfamidophosphonates under ultrasound irradiation and catalyst-free conditions. RSC Adv 2015. [DOI: 10.1039/c5ra03473f] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
A one-pot synthesis of novel α-sulfamidophosphonates is described via a three-component reaction under ultrasound irradiation, catalyst-free and solvent-free conditions. The synthesis has mild conditions, short reaction times, good yields and simple work-up procedures.
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Affiliation(s)
- Billel Belhani
- Laboratory of Applied Organic Chemistry
- Synthesis of Biomolecules and Molecular Modelling Group
- Sciences Faculty
- Chemistry Department
- BadjiMokhtar – Annaba University
| | - Malika Berredjem
- Laboratory of Applied Organic Chemistry
- Synthesis of Biomolecules and Molecular Modelling Group
- Sciences Faculty
- Chemistry Department
- BadjiMokhtar – Annaba University
| | - Marc Le Borgne
- Université de Lyon
- Université Lyon 1
- Faculté de Pharmacie e ISPB
- EA 4446 Biomolécules Cancer et Chimiorésistances
- SFR Santé Lyon-Est
| | - Zouhair Bouaziz
- Université de Lyon
- Université Lyon 1
- Faculté de Pharmacie e ISPB
- EA 4446 Biomolécules Cancer et Chimiorésistances
- SFR Santé Lyon-Est
| | - Jacques Lebreton
- Université de Nantes
- UMR CNRS 6230
- Chimie Et Interdisciplinarité: Synthèse, Analyse, Modélisation (CEISAM)
- UFR des Sciences et des Techniques
- 44322 Nantes Cedex 3
| | - Nour-Eddine Aouf
- Laboratory of Applied Organic Chemistry
- Synthesis of Biomolecules and Molecular Modelling Group
- Sciences Faculty
- Chemistry Department
- BadjiMokhtar – Annaba University
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14
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Bouzina A, Belhani B, Aouf NE, Berredjem M. A novel, rapid and green method of phosphorylation under ultrasound irradiation and catalyst free conditions. RSC Adv 2015. [DOI: 10.1039/c5ra06380a] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Phosphorylation of N-acylamines, N-acylaminoesters, N-acylaminoalcohols and N-acylsulfonamides with trialkylphosphite was promoted under ultrasound irradiation using solvent and catalyst free conditions to afford amidophosponates with 75–90% yield in 5–15 min.
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Affiliation(s)
- Abdeslem Bouzina
- Laboratory of Applied Organic Chemistry
- Synthesis of Biomolecules and Molecular Modelling Group
- Sciences Faculty
- Chemistry Department
- Badji-Mokhtar – Annaba University
| | - Billel Belhani
- Laboratory of Applied Organic Chemistry
- Synthesis of Biomolecules and Molecular Modelling Group
- Sciences Faculty
- Chemistry Department
- Badji-Mokhtar – Annaba University
| | - Nour-Eddine Aouf
- Laboratory of Applied Organic Chemistry
- Synthesis of Biomolecules and Molecular Modelling Group
- Sciences Faculty
- Chemistry Department
- Badji-Mokhtar – Annaba University
| | - Malika Berredjem
- Laboratory of Applied Organic Chemistry
- Synthesis of Biomolecules and Molecular Modelling Group
- Sciences Faculty
- Chemistry Department
- Badji-Mokhtar – Annaba University
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