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Apostolopoulos ID, Papandrianos NI, Papathanasiou ND, Papageorgiou EI. Fuzzy Cognitive Map Applications in Medicine over the Last Two Decades: A Review Study. Bioengineering (Basel) 2024; 11:139. [PMID: 38391626 PMCID: PMC10886348 DOI: 10.3390/bioengineering11020139] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2023] [Revised: 01/18/2024] [Accepted: 01/27/2024] [Indexed: 02/24/2024] Open
Abstract
Fuzzy Cognitive Maps (FCMs) have become an invaluable tool for healthcare providers because they can capture intricate associations among variables and generate precise predictions. FCMs have demonstrated their utility in diverse medical applications, from disease diagnosis to treatment planning and prognosis prediction. Their ability to model complex relationships between symptoms, biomarkers, risk factors, and treatments has enabled healthcare providers to make informed decisions, leading to better patient outcomes. This review article provides a thorough synopsis of using FCMs within the medical domain. A systematic examination of pertinent literature spanning the last two decades forms the basis of this overview, specifically delineating the diverse applications of FCMs in medical realms, including decision-making, diagnosis, prognosis, treatment optimisation, risk assessment, and pharmacovigilance. The limitations inherent in FCMs are also scrutinised, and avenues for potential future research and application are explored.
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Affiliation(s)
| | - Nikolaos I Papandrianos
- Department of Energy Systems, University of Thessaly, Gaiopolis Campus, 41500 Larisa, Greece
| | | | - Elpiniki I Papageorgiou
- Department of Energy Systems, University of Thessaly, Gaiopolis Campus, 41500 Larisa, Greece
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Dogu E, Albayrak YE, Tuncay E. Length of hospital stay prediction with an integrated approach of statistical-based fuzzy cognitive maps and artificial neural networks. Med Biol Eng Comput 2021; 59:483-496. [PMID: 33544271 DOI: 10.1007/s11517-021-02327-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2020] [Accepted: 01/24/2021] [Indexed: 10/22/2022]
Abstract
Chronic obstructive pulmonary disease (COPD) is a global burden, which is estimated to be the third leading cause of death worldwide by 2030. The economic burden of COPD grows continuously because it is not a curable disease. These conditions make COPD an important research field of artificial intelligence (AI) techniques in medicine. In this study, an integrated approach of the statistical-based fuzzy cognitive maps (SBFCM) and artificial neural networks (ANN) is proposed for predicting length of hospital stay of patients with COPD, who admitted to the hospital with an acute exacerbation. The SBFCM method is developed to determine the input variables of the ANN model. The SBFCM conducts statistical analysis to prepare preliminary information for the experts and then collects expert opinions accordingly, to define a conceptual map of the system. The integration of SBFCM and ANN methods provides both statistical data and expert opinion in the prediction model. In the numerical application, the proposed approach outperformed the conventional approach and other machine learning algorithms with 79.95% accuracy, revealing the power of expert opinion involvement in medical decisions. A medical decision support framework is constructed for better prediction of length of hospital stay and more effective hospital management.
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Affiliation(s)
- Elif Dogu
- Industrial Engineering Dept., Galatasaray University, Ciragan Cad. No.: 36, Ortakoy, 34349, Istanbul, Turkey.
| | - Y Esra Albayrak
- Industrial Engineering Dept., Galatasaray University, Ciragan Cad. No.: 36, Ortakoy, 34349, Istanbul, Turkey
| | - Esin Tuncay
- Yedikule Chest Diseases & Thoracic Surgery Training & Research Hospital, Belgrad Kapi Yolu Cad. No.: 1 34020 Zeytinburnu, Istanbul, Turkey
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Abstract
AbstractFuzzy cognitive maps (FCMs) have been widely applied to analyze complex, causal-based systems in terms of modeling, decision making, analysis, prediction, classification, etc. This study reviews the applications and trends of FCMs in the field of systems risk analysis to the end of August 2020. To this end, the concepts of failure, accident, incident, hazard, risk, error, and fault are focused in the context of the conventional risks of the systems. After reviewing risk-based articles, a bibliographic study of the reviewed articles was carried out. The survey indicated that the main applications of FCMs in the systems risk field were in management sciences, engineering sciences and industrial applications, and medical and biological sciences. A general trend for potential FCMs’ applications in the systems risk field is provided by discussing the results obtained from different parts of the survey study.
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Jahangoshai Rezaee M, Sadatpour M, Ghanbari-Ghoushchi N, Fathi E, Alizadeh A. Analysis and decision based on specialist self-assessment for prognosis factors of acute leukemia integrating data-driven Bayesian network and fuzzy cognitive map. Med Biol Eng Comput 2020; 58:2845-2861. [PMID: 32970270 DOI: 10.1007/s11517-020-02267-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2020] [Accepted: 09/08/2020] [Indexed: 01/16/2023]
Abstract
The purpose of the present study is to analyze the prognostic factors of acute leukemia and to construct a decision model based on a causal relationship between the factors of this disease to assist medical specialists. In medical decisions, to reach effective, quick, and reliable results, there is a need for a simple decision-making model based on a specialist's self-assessment. It may help the medical team before final diagnosis by costly and time-consuming procedures such as bone marrow sampling and pathological test as well as provide an appropriate prognosis and diagnosis tool. Because of the complex and not the well-defined structure of medical data, the use of intelligent methods must be considered. For this purpose, first, a data-driven Bayesian network (BN) and Greedy algorithm are employed to determine causal relationships and probability between nodes using the real set of data. Then, these causal relationships will form based on the fuzzy cognitive map (FCM). Finally, according to scenarios defined, the results are analyzed. These analyses are also repeated for each type of acute leukemia including acute lymphocytic leukemia (ALL) and acute myelocytic leukemia (AML). Graphical abstract.
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Affiliation(s)
| | - Maryam Sadatpour
- Faculty of Industrial Engineering, Urmia University of Technology, Urmia, Iran
| | | | - Ehsan Fathi
- Faculty of Industrial Engineering, Urmia University of Technology, Urmia, Iran
| | - Azra Alizadeh
- Department of Internal Medicine, Urmia University of Medical Sciences, Urmia, Iran
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Dogu E, Albayrak YE, Tuncay E. Multidrug-resistant tuberculosis risk factors assessment with intuitionistic fuzzy cognitive maps. JOURNAL OF INTELLIGENT & FUZZY SYSTEMS 2020. [DOI: 10.3233/jifs-179470] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Affiliation(s)
- Elif Dogu
- Industrial Engineering Department, Galatasaray University, Besiktas, Istanbul, Turkey
| | - Y. Esra Albayrak
- Industrial Engineering Department, Galatasaray University, Besiktas, Istanbul, Turkey
| | - Esin Tuncay
- Yedikule Chest Diseases & Thoracic Surgery Training & Research Hospital, Zeytinburnu, Istanbul, Turkey
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A fuzzy scenario-based approach to analyzing neuromarketing technology evaluation factors. Soft comput 2019. [DOI: 10.1007/s00500-019-03770-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Efe B. Fuzzy cognitive map based quality function deployment approach for dishwasher machine selection. Appl Soft Comput 2019. [DOI: 10.1016/j.asoc.2019.105660] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Proposing an Integrated Method based on Fuzzy Tuning and ICA Techniques to Identify the Most Influencing Features in Breast Cancer. IRANIAN RED CRESCENT MEDICAL JOURNAL 2019. [DOI: 10.5812/ircmj.92077] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Efe B, Kurt M. A novel approach recommendation for hazard analysis. INTERNATIONAL JOURNAL OF OCCUPATIONAL SAFETY AND ERGONOMICS 2019; 27:805-816. [PMID: 31370755 DOI: 10.1080/10803548.2019.1648738] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Abstract
Hazard evaluation generally defines the ranking of hazards in the work environment and ignores the interaction of hazards. This article aims to overcome this drawback using a fuzzy cognitive map (FCM) approach to analyze the interaction of hazards related to sheathing tasks in a construction firm. The FCM approach can be insufficient for hazard evaluation over the long term due to certain budget and time restrictions allocated by the firm. When the firm allocates more time and budget for a process, the firm must limit the allocated time and budget for the other processes. This article aims to overcome this problem so linear programming is used to optimize the goal and resources of the firm. The article contributes to hazard evaluation of sheathing tasks in a construction firm considering the interaction of the hazards and the capacity of the firm.
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Affiliation(s)
- Burak Efe
- Department of Industrial Engineering, Necmettin Erbakan University, Turkey
| | - Mustafa Kurt
- Department of Industrial Engineering, Gazi University, Turkey
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Paz MFCJ, Sobral ALP, Picada JN, Grivicich I, Júnior ALG, da Mata AMOF, de Alencar MVOB, de Carvalho RM, da Conceição Machado K, Islam MT, de Carvalho Melo Cavalcante AA, da Silva J. Persistent Increased Frequency of Genomic Instability in Women Diagnosed with Breast Cancer: Before, during, and after Treatments. OXIDATIVE MEDICINE AND CELLULAR LONGEVITY 2018; 2018:2846819. [PMID: 30013718 PMCID: PMC6022262 DOI: 10.1155/2018/2846819] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/19/2017] [Accepted: 02/13/2018] [Indexed: 12/12/2022]
Abstract
This study aimed to evaluate DNA damage in patients with breast cancer before treatment (background) and after chemotherapy (QT) and radiotherapy (RT) treatment using the Comet assay in peripheral blood and the micronucleus test in buccal cells. We also evaluated repair of DNA damage after the end of RT, as well as the response of patient's cells before treatment with an oxidizing agent (H2O2; challenge assay). Fifty women with a mammographic diagnosis negative for cancer (control group) and 100 women with a diagnosis of breast cancer (followed up during the treatment) were involved in this study. The significant DNA damage was observed by increasing in the index and frequency of damage along with the increasing of the frequency of micronuclei in peripheral blood and cells of the buccal mucosa, respectively. Despite the variability of the responses of breast cancer patients, the individuals presented lesions on the DNA, detected by the Comet assay and micronucleus Test, from the diagnosis until the end of the oncological treatment and were more susceptible to oxidative stress. We can conclude that the damages were due to clastogenic and/or aneugenic effects related to the neoplasia itself and that they increased, especially after RT.
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Affiliation(s)
- Márcia Fernanda Correia Jardim Paz
- Laboratory of Genetic Toxicology, PPGBioSaúde and PPGGTA, Lutheran University of Brazil (ULBRA), Av. Farroupilha 8001, Prédio 22, Sala 22 (4° Andar), 92425-900 Canoas, RS, Brazil
- Laboratory of Genetic Toxicology, PPGCF, Federal University of Piauí, Av. Universitária S/N, Ininga, 64049-550 Teresina, PI, Brazil
- Post-Graduation Program in Biotechnology, RENORBIO, Federal University of Piauí, Av. Universitária, S/N, Ininga, 64049-550 Teresina, PI, Brazil
| | - André Luiz Pinho Sobral
- University Hospital of Piauí, Av. Universitária, S/N, Ininga, 64049-550 Teresina, PI, Brazil
| | - Jaqueline Nascimento Picada
- Laboratory of Genetic Toxicology, PPGBioSaúde and PPGGTA, Lutheran University of Brazil (ULBRA), Av. Farroupilha 8001, Prédio 22, Sala 22 (4° Andar), 92425-900 Canoas, RS, Brazil
| | - Ivana Grivicich
- Laboratory of Cancer Biology, PPGBioSaúde and PPGGTA, Lutheran University of Brazil (ULBRA), Av. Farroupilha 8001, Prédio 22, Sala 22 (4° Andar), 92425-900 Canoas, RS, Brazil
| | - Antonio Luiz Gomes Júnior
- Laboratory of Genetic Toxicology, PPGCF, Federal University of Piauí, Av. Universitária S/N, Ininga, 64049-550 Teresina, PI, Brazil
- Post-Graduation Program in Biotechnology, RENORBIO, Federal University of Piauí, Av. Universitária, S/N, Ininga, 64049-550 Teresina, PI, Brazil
- Biomedicine Department, UNINOVAFAPI University, Teresina, Brazil
| | - Ana Maria Oliveira Ferreira da Mata
- Laboratory of Genetic Toxicology, PPGCF, Federal University of Piauí, Av. Universitária S/N, Ininga, 64049-550 Teresina, PI, Brazil
- Post-Graduation Program in Biotechnology, RENORBIO, Federal University of Piauí, Av. Universitária, S/N, Ininga, 64049-550 Teresina, PI, Brazil
| | - Marcus Vinícius Oliveira Barros de Alencar
- Laboratory of Genetic Toxicology, PPGCF, Federal University of Piauí, Av. Universitária S/N, Ininga, 64049-550 Teresina, PI, Brazil
- Department of Biochemistry and Pharmacology, Federal University of Piauí, Av. Universitária, S/N, Ininga, 64049-550 Teresina, PI, Brazil
| | - Rodrigo Mendes de Carvalho
- Central Laboratory of Public Health of Piauí, Rua Dezenove de Novembro 1945, Bairro Primavera, 64002-570 Teresina, PI, Brazil
| | - Kátia da Conceição Machado
- Laboratory of Genetic Toxicology, PPGCF, Federal University of Piauí, Av. Universitária S/N, Ininga, 64049-550 Teresina, PI, Brazil
- Post-Graduation Program in Biotechnology, RENORBIO, Federal University of Piauí, Av. Universitária, S/N, Ininga, 64049-550 Teresina, PI, Brazil
| | - Muhammad Torequl Islam
- Department for Management of Science and Technology Development, Ton Duc Thang University, Ho Chi Minh City 700000, Vietnam
- Faculty of Pharmacy, Ton Duc Thang University, Ho Chi Minh City 700000, Vietnam
| | - Ana Amélia de Carvalho Melo Cavalcante
- Laboratory of Genetic Toxicology, PPGCF, Federal University of Piauí, Av. Universitária S/N, Ininga, 64049-550 Teresina, PI, Brazil
- Post-Graduation Program in Biotechnology, RENORBIO, Federal University of Piauí, Av. Universitária, S/N, Ininga, 64049-550 Teresina, PI, Brazil
| | - Juliana da Silva
- Laboratory of Genetic Toxicology, PPGBioSaúde and PPGGTA, Lutheran University of Brazil (ULBRA), Av. Farroupilha 8001, Prédio 22, Sala 22 (4° Andar), 92425-900 Canoas, RS, Brazil
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Paz MFCJ, de Alencar MVOB, Gomes Junior AL, da Conceição Machado K, Islam MT, Ali ES, Shill MC, Ahmed MI, Uddin SJ, da Mata AMOF, de Carvalho RM, da Conceição Machado K, Sobral ALP, da Silva FCC, de Castro e Souza JM, Arcanjo DDR, Ferreira PMP, Mishra SK, da Silva J, de Carvalho Melo-Cavalcante AA. Correlations between Risk Factors for Breast Cancer and Genetic Instability in Cancer Patients-A Clinical Perspective Study. Front Genet 2018; 8:236. [PMID: 29503660 PMCID: PMC5821102 DOI: 10.3389/fgene.2017.00236] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2017] [Accepted: 12/27/2017] [Indexed: 11/18/2022] Open
Abstract
Molecular epidemiological studies have identified several risk factors linking to the genes and external factors in the pathogenesis of breast cancer. In this sense, genetic instability caused by DNA damage and DNA repair inefficiencies are important molecular events for the diagnosis and prognosis of therapies. Therefore, the objective of this study was to analyze correlation between sociocultural, occupational, and lifestyle risk factors with levels of genetic instability in non-neoplastic cells of breast cancer patients. Total 150 individuals were included in the study that included 50 breast cancer patients submitted to chemotherapy (QT), 50 breast cancer patients submitted to radiotherapy (RT), and 50 healthy women without any cancer. Cytogenetic biomarkers for apoptosis and DNA damage were evaluated in samples of buccal epithelial and peripheral blood cells through micronuclei and comet assay tests. Elder age patients (61-80 years) had higher levels of apoptosis (catriolysis by karyolysis) and DNA damage at the diagnosis (baseline damage) with increased cell damage during QT and especially during RT. We also reported the increased frequencies of cytogenetic biomarkers in patients who were exposed to ionizing radiation as well as for alcoholism and smoking. QT and RT induced high levels of fragmentation (karyorrhexis) and nuclear dissolution (karyolysis) and DNA damage. Correlations were observed between age and karyorrhexis at diagnosis; smoking and karyolysis during RT; and radiation and karyolysis during QT. These correlations indicate that risk factors may also influence the genetic instability in non-neoplastic cells caused to the patients during cancer therapies.
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Affiliation(s)
| | | | - Antonio Luiz Gomes Junior
- Postgraduate Program in Pharmaceutical Sciences, Federal University of Piauí, Teresina, Brazil
- Biomedicine Department, UNINOVAFAPI University, Teresina, Brazil
| | | | - Muhammad Torequl Islam
- Postgraduate Program in Pharmaceutical Sciences, Federal University of Piauí, Teresina, Brazil
- Department of Pharmacy, Southern University Bangladesh, Chittagong, Bangladesh
| | - Eunus S. Ali
- School of Medicine, Flinders University, Adelaide, SA, Australia
| | - Manik Chandra Shill
- Department of Pharmaceutical Sciences, North South University, Dhaka, Bangladesh
| | - Md. Iqbal Ahmed
- Pharmacy Discipline, Life Science School, Khulna University, Khulna, Bangladesh
| | - Shaikh Jamal Uddin
- Pharmacy Discipline, Life Science School, Khulna University, Khulna, Bangladesh
| | | | | | | | | | | | | | | | - Paulo Michel Pinheiro Ferreira
- Postgraduate Program in Pharmaceutical Sciences, Federal University of Piauí, Teresina, Brazil
- Department of Biophysics and Physiology, Universidade Federal do Piauí, Teresina, Brazil
| | - Siddhartha Kumar Mishra
- Cancer Biology Laboratory, School of Biological Sciences (Zoology), Dr. Harisingh Gour Central University, Sagar, India
| | - Juliana da Silva
- Program in Cellular and Molecular Biology Applied to Health Sciences, Universidade Luterana do Brasil, Canoas, Brazil
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Amirkhani A, Papageorgiou EI, Mohseni A, Mosavi MR. A review of fuzzy cognitive maps in medicine: Taxonomy, methods, and applications. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2017; 142:129-145. [PMID: 28325441 DOI: 10.1016/j.cmpb.2017.02.021] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2016] [Revised: 02/11/2017] [Accepted: 02/17/2017] [Indexed: 06/06/2023]
Abstract
BACKGROUND AND OBJECTIVE A high percentage of medical errors, committed because of physician's lack of experience, huge volume of data to be analyzed, and inaccessibility to medical records of previous patients, can be reduced using computer-aided techniques. Therefore, designing more efficient medical decision-support systems (MDSSs) to assist physicians in decision-making is crucially important. Through combining the properties of fuzzy logic and neural networks, fuzzy cognitive maps (FCMs) are among the latest, most efficient, and strongest artificial intelligence techniques for modeling complex systems. This review study is conducted to identify different FCM structures used in MDSS designs. The best structure for each medical application can be introduced by studying the properties of FCM structures. METHODS This paper surveys the most important decision- making methods and applications of FCMs in the medical field in recent years. To investigate the efficiency and capability of different FCM models in designing MDSSs, medical applications are categorized into four key areas: decision-making, diagnosis, prediction, and classification. Also, various diagnosis and decision support problems addressed by FCMs in recent years are reviewed with the goal of introducing different types of FCMs and determining their contribution to the improvements made in the fields of medical diagnosis and treatment. RESULTS In this survey, a general trend for future studies in this field is provided by analyzing various FCM structures used for medical purposes, and the results from each category. CONCLUSIONS Due to the unique specifications of FCMs in integrating human knowledge and experience with computer-aided techniques, they are among practical instruments for MDSS design. In the not too distant future, they will have a significant role in medical sciences.
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Affiliation(s)
- Abdollah Amirkhani
- Dept. of Electrical Engineering, Iran University of Science and Technology, Tehran 16846-13114, Iran.
| | - Elpiniki I Papageorgiou
- Dept. of Computer Engineering, Technological Educational Institute of Central Greece, Lamia 35100, Greece.
| | - Akram Mohseni
- Dept. of Electrical Engineering, Iran University of Science and Technology, Tehran 16846-13114, Iran.
| | - Mohammad R Mosavi
- Dept. of Electrical Engineering, Iran University of Science and Technology, Tehran 16846-13114, Iran.
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