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Kasper JB, Saisaha P, de Roo M, Groen MJ, Vicens L, Borrell M, de Boer JW, Hage R, Costas M, Browne WR. A Common Active Intermediate in the Oxidation of Alkenes, Alcohols and Alkanes with H 2O 2 and a Mn(II)/Pyridin-2-Carboxylato Catalyst. ChemCatChem 2023; 15:e202201072. [PMID: 37082112 PMCID: PMC10108234 DOI: 10.1002/cctc.202201072] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Received: 08/29/2022] [Revised: 11/03/2022] [Indexed: 11/09/2022]
Abstract
The mechanism and the reactive species involved in the oxidation of alkenes, and alcohols with H2O2, catalysed by an in situ prepared mixture of a MnII salt, pyridine-2-carboxylic acid and a ketone is elucidated using substrate competition experiments, kinetic isotope effect (KIE) measurements, and atom tracking with 18O labelling. The data indicate that a single reactive species engages in the oxidation of both alkenes and alcohols. The primary KIE in the oxidation of benzyl alcohols is ca. 3.5 and shows the reactive species to be selective despite a zero order dependence on substrate concentration, and the high turnover frequencies (up to 30 s-1) observed. Selective 18O labelling identifies the origin of the oxygen atoms transferred to the substrate during oxidation, and is consistent with a highly reactive, e. g., [MnV(O)(OH)] or [MnV(O)2], species rather than an alkylperoxy or hydroperoxy species.
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Affiliation(s)
- Johann B. Kasper
- Molecular Inorganic ChemistryStratingh Institute for ChemistryFaculty of Science and EngineeringUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| | - Pattama Saisaha
- Molecular Inorganic ChemistryStratingh Institute for ChemistryFaculty of Science and EngineeringUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| | - Maurits de Roo
- Molecular Inorganic ChemistryStratingh Institute for ChemistryFaculty of Science and EngineeringUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| | - Mitchell J. Groen
- Molecular Inorganic ChemistryStratingh Institute for ChemistryFaculty of Science and EngineeringUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| | - Laia Vicens
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de QuímicaUniversitat de GironaCampus MontiliviGironaE-17071, CataloniaSpain
| | - Margarida Borrell
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de QuímicaUniversitat de GironaCampus MontiliviGironaE-17071, CataloniaSpain
| | - Johannes W. de Boer
- Molecular Inorganic ChemistryStratingh Institute for ChemistryFaculty of Science and EngineeringUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| | - Ronald Hage
- Molecular Inorganic ChemistryStratingh Institute for ChemistryFaculty of Science and EngineeringUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
- Catexel B.V.BioPartner Center LeidenGalileiweg 82333BDLeidenThe Netherlands
| | - Miquel Costas
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de QuímicaUniversitat de GironaCampus MontiliviGironaE-17071, CataloniaSpain
| | - Wesley R. Browne
- Molecular Inorganic ChemistryStratingh Institute for ChemistryFaculty of Science and EngineeringUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
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Weerawardene KLDM, Aikens CM. Theoretical Investigation of Water Oxidation Mechanism on Pure Manganese and Ca-Doped Bimetal Oxide Complexes. J Phys Chem A 2019; 123:6152-6159. [DOI: 10.1021/acs.jpca.9b02652] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 11/30/2022]
Affiliation(s)
| | - Christine M. Aikens
- Department of Chemistry, Kansas State University, Manhattan, Kansas 66506, United States
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3
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Vogiatzis KD, Polynski MV, Kirkland JK, Townsend J, Hashemi A, Liu C, Pidko EA. Computational Approach to Molecular Catalysis by 3d Transition Metals: Challenges and Opportunities. Chem Rev 2019; 119:2453-2523. [PMID: 30376310 PMCID: PMC6396130 DOI: 10.1021/acs.chemrev.8b00361] [Citation(s) in RCA: 233] [Impact Index Per Article: 38.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Academic Contribution Register] [Received: 06/07/2018] [Indexed: 12/28/2022]
Abstract
Computational chemistry provides a versatile toolbox for studying mechanistic details of catalytic reactions and holds promise to deliver practical strategies to enable the rational in silico catalyst design. The versatile reactivity and nontrivial electronic structure effects, common for systems based on 3d transition metals, introduce additional complexity that may represent a particular challenge to the standard computational strategies. In this review, we discuss the challenges and capabilities of modern electronic structure methods for studying the reaction mechanisms promoted by 3d transition metal molecular catalysts. Particular focus will be placed on the ways of addressing the multiconfigurational problem in electronic structure calculations and the role of expert bias in the practical utilization of the available methods. The development of density functionals designed to address transition metals is also discussed. Special emphasis is placed on the methods that account for solvation effects and the multicomponent nature of practical catalytic systems. This is followed by an overview of recent computational studies addressing the mechanistic complexity of catalytic processes by molecular catalysts based on 3d metals. Cases that involve noninnocent ligands, multicomponent reaction systems, metal-ligand and metal-metal cooperativity, as well as modeling complex catalytic systems such as metal-organic frameworks are presented. Conventionally, computational studies on catalytic mechanisms are heavily dependent on the chemical intuition and expert input of the researcher. Recent developments in advanced automated methods for reaction path analysis hold promise for eliminating such human-bias from computational catalysis studies. A brief overview of these approaches is presented in the final section of the review. The paper is closed with general concluding remarks.
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Affiliation(s)
| | | | - Justin K. Kirkland
- Department
of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Jacob Townsend
- Department
of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Ali Hashemi
- Inorganic
Systems Engineering group, Department of Chemical Engineering, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
| | - Chong Liu
- Inorganic
Systems Engineering group, Department of Chemical Engineering, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
| | - Evgeny A. Pidko
- TheoMAT
group, ITMO University, Lomonosova 9, St. Petersburg 191002, Russia
- Inorganic
Systems Engineering group, Department of Chemical Engineering, Delft University of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
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Abstract
The kinetics and mechanisms of thermal and photochemical oxidation of water with homogeneous and heterogeneous catalysts, including conversion from homogeneous to heterogeneous catalysts in the course of water oxidation, are discussed in this review article. Molecular and homogeneous catalysts have the advantage to clarify the catalytic mechanisms by detecting active intermediates in catalytic water oxidation. On the other hand, heterogeneous nanoparticle catalysts have advantages for practical applications due to high catalytic activity, robustness and easier separation of catalysts by filtration as compared with molecular homogeneous precursors. Ligand oxidation of homogeneous catalysts sometimes results in the dissociation of ligands to form nanoparticles, which act as much more efficient catalysts for water oxidation. Since it is quite difficult to identify active intermediates on the heterogeneous catalyst surface, the mechanism of water oxidation has hardly been clarified under heterogeneous catalytic conditions. This review focuses on the kinetics and mechanisms of catalytic water oxidation with homogeneous catalysts, which may be converted to heterogeneous nanoparticle catalysts depending on various reaction conditions.
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Affiliation(s)
- Shunichi Fukuzumi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea.
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Guo Y, Li H, He LL, Zhao DX, Gong LD, Yang ZZ. Theoretical reflections on the structural polymorphism of the oxygen-evolving complex in the S2 state and the correlations to substrate water exchange and water oxidation mechanism in photosynthesis. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2017; 1858:833-846. [DOI: 10.1016/j.bbabio.2017.08.001] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 02/02/2017] [Revised: 06/25/2017] [Accepted: 08/02/2017] [Indexed: 11/29/2022]
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6
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Najafpour MM. From manganese complexes to nano-sized manganese oxides as water-oxidizing catalysts for artificial photosynthetic systems: Insights from the Zanjan team. CR CHIM 2017. [DOI: 10.1016/j.crci.2015.12.009] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 01/17/2023]
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7
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Cross-Sectional TEM Analysis of an ITO Surface Coated with Photosystem I and Molecular Wires. J Inorg Organomet Polym Mater 2016. [DOI: 10.1007/s10904-016-0396-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Academic Contribution Register] [Indexed: 11/27/2022]
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Nath K, Najafpour MM, Voloshin RA, Balaghi SE, Tyystjärvi E, Timilsina R, Eaton-Rye JJ, Tomo T, Nam HG, Nishihara H, Ramakrishna S, Shen JR, Allakhverdiev SI. Photobiological hydrogen production and artificial photosynthesis for clean energy: from bio to nanotechnologies. PHOTOSYNTHESIS RESEARCH 2015; 126:237-247. [PMID: 25899392 DOI: 10.1007/s11120-015-0139-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 02/09/2015] [Accepted: 04/02/2015] [Indexed: 06/04/2023]
Abstract
Global energy demand is increasing rapidly and due to intensive consumption of different forms of fuels, there are increasing concerns over the reduction in readily available conventional energy resources. Because of the deleterious atmospheric effects of fossil fuels and the uncertainties of future energy supplies, there is a surge of interest to find environmentally friendly alternative energy sources. Hydrogen (H2) has attracted worldwide attention as a secondary energy carrier, since it is the lightest carbon-neutral fuel rich in energy per unit mass and easy to store. Several methods and technologies have been developed for H2 production, but none of them are able to replace the traditional combustion fuel used in automobiles so far. Extensively modified and renovated methods and technologies are required to introduce H2 as an alternative efficient, clean, and cost-effective future fuel. Among several emerging renewable energy technologies, photobiological H2 production by oxygenic photosynthetic microbes such as green algae and cyanobacteria or by artificial photosynthesis has attracted significant interest. In this short review, we summarize the recent progress and challenges in H2-based energy production by means of biological and artificial photosynthesis routes.
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Affiliation(s)
- K Nath
- Research Institute for Next Generation (RING), Kalanki, Kathmandu-14, Kathmandu, Nepal
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI, 49006, USA
| | - M M Najafpour
- Department of Chemistry, Institute for Advanced Studies in Basic Sciences (IASBS), 45137-66731, Zanjan, Iran
- Center of Climate Change and Global Warming, Institute for Advanced Studies in Basic Sciences (IASBS), 45137-66731, Zanjan, Iran
| | - R A Voloshin
- Controlled Photobiosynthesis Laboratory, Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya Street 35, Moscow, 127276, Russia
| | - S E Balaghi
- Young Researchers and Elite Club, Shiraz Branch, Islamic Azad University, Shiraz, Iran
| | - E Tyystjärvi
- Department of Biochemistry / Molecular Plant Biology, University of Turku, 20014, Turku, Finland
| | - R Timilsina
- Center for Plant Aging Research, Institute for Basic Science, and Department of New Biology, DGIST, Daegu, 711-873, Republic of Korea
| | - J J Eaton-Rye
- Department of Biochemistry, University of Otago, P.O. Box 56, Dunedin, 9054, New Zealand
| | - T Tomo
- Department of Biology, Faculty of Science, Tokyo University of Science, Kagurazaka 1-3, Shinjuku-Ku, Tokyo, 162-8601, Japan
- PRESTO, Japan Science and Technology Agency (JST), Saitama, 332-0012, Japan
| | - H G Nam
- Center for Plant Aging Research, Institute for Basic Science, and Department of New Biology, DGIST, Daegu, 711-873, Republic of Korea
| | - H Nishihara
- Department of Chemistry, School of Science, The University of Tokyo, 7-3-1 Hongo Bunkyo-ku, Tokyo, 113-0033, Japan
| | - S Ramakrishna
- Department of Mechanical Engineering, Center for Nanofibers and Nanotechnology, National University of Singapore, Singapore, 117576, Singapore
| | - J-R Shen
- Photosynthesis Research Center, Graduate School of Natural Science and Technology, Faculty of Science, Okayama University, Okayama, 700-8530, Japan
| | - S I Allakhverdiev
- Controlled Photobiosynthesis Laboratory, Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya Street 35, Moscow, 127276, Russia.
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino, Moscow Region, 142290, Russia.
- Department of Plant Physiology, Faculty of Biology, M.V. Lomonosov Moscow State University, Leninskie Gory 1-12, Moscow, 119991, Russia.
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9
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Chemical, electrochemical and photochemical molecular water oxidation catalysts. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2015; 152:71-81. [DOI: 10.1016/j.jphotobiol.2014.10.022] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 08/07/2014] [Revised: 09/08/2014] [Accepted: 10/27/2014] [Indexed: 11/19/2022]
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10
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Najafpour MM, Ghobadi MZ, Larkum AW, Shen JR, Allakhverdiev SI. The biological water-oxidizing complex at the nano-bio interface. TRENDS IN PLANT SCIENCE 2015; 20:559-68. [PMID: 26183174 DOI: 10.1016/j.tplants.2015.06.005] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Academic Contribution Register] [Received: 09/22/2014] [Revised: 05/30/2015] [Accepted: 06/16/2015] [Indexed: 05/03/2023]
Abstract
Photosynthesis is one of the most important processes on our planet, providing food and oxygen for the majority of living organisms on Earth. Over the past 30 years scientists have made great strides in understanding the central photosynthetic process of oxygenic photosynthesis, whereby water is used to provide the hydrogen and reducing equivalents vital to CO2 reduction and sugar formation. A recent crystal structure at 1.9-1.95Å has made possible an unparalleled map of the structure of photosystem II (PSII) and particularly the manganese-calcium (Mn-Ca) cluster, which is responsible for splitting water. Here we review how knowledge of the water-splitting site provides important criteria for the design of artificial Mn-based water-oxidizing catalysts, allowing the development of clean and sustainable solar energy technologies.
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Affiliation(s)
- Mohammad Mahdi Najafpour
- Department of Chemistry, Institute for Advanced Studies in Basic Sciences (IASBS), Zanjan 45137-66731, Iran; Center of Climate Change and Global Warming, Institute for Advanced Studies in Basic Sciences (IASBS), Zanjan 45137-66731, Iran.
| | - Mohadeseh Zarei Ghobadi
- Department of Chemistry, Institute for Advanced Studies in Basic Sciences (IASBS), Zanjan 45137-66731, Iran
| | - Anthony W Larkum
- Plant Functional Biology and Climate Change Cluster, University of Technology Sydney, Sydney, Australia
| | - Jian-Ren Shen
- Photosynthesis Research Center, Graduate School of Natural Science and Technology, Faculty of Science, Okayama University, Okayama 700-8530, Japan
| | - Suleyman I Allakhverdiev
- Controlled Photobiosynthesis Laboratory, Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya Street 35, Moscow 127276, Russia; Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russia; Department of Plant Physiology, Faculty of Biology, M.V. Lomonosov Moscow State University, Leninskie Gory 1-12, Moscow 119991, Russia.
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