ATR-FTIR spectroscopy probing of structural alterations in the cellular membrane of abscopal liver cells

Optical biomarker analysis for renal cell carcinoma obtained from preoperative and postoperative patients using ATR-FTIR spectroscopy

Renal cell carcinoma (RCC) is the most common malignant tumor in the urinary system, accounting for 80 % to 90 % for all renal malignancies. Traditional diagnostic methods like magnetic resonance imaging (MRI) and computed tomography (CT) lack the sensitivity and specificity as they lack specific biomarkers. These limitations impede effective monitoring of tumor recurrence. This study aims to employ Attenuated Total Reflection (ATR)-Fourier transform infrared (FTIR) spectroscopy, an optical technology sensitive to molecular groups, to analyze the potential optical biomarkers in urine and plasma samples from RCC patients pre- and post-surgery. The results reveal distinctive spectral information from both plasma and urine samples. Post-surgery urine spectra exhibit complexity compared to plasma, showing reduced content at 1072 cm-1, 1347 cm-1 and 1654 cm-1 bands, while increased content at 1112 cm-1, 1143 cm-1, 1447 cm-1, 3334 cm-1 and 3420 cm-1 bands. Utilizing machine learning models such as eXtreme Gradient Boosting (XGBoost), support vector machine (SVM), partial least squares (PLS), and artificial neural network (ANN), the study evaluated plasma and urine samples pre- and post-surgery. Remarkably, the XGBoost method excelled in distinguishing between tumor conditions and recovery, achieving an impressive AUC value of 0.99. These results underscore the potential of ATR-FTIR technology in identifying RCC optical biomarkers, with XGBoost showing promise as a valuable screening tool for RCC recurrence diagnosis.

Fabrication, Characterization and Adsorption Investigation of Nano Zinc Oxide–Sodium Alginate Beads for Effective Removal of Chromium (VI) from Aqueous Solution

Alginate–zinc oxide (Alg–ZnO) biocomposite was synthesized and tested as a chromium ions Cr(VI) adsorbent for environmental applications. Alg–ZnO biocomposite was prepared by the interaction between sodium alginate biopolymer and zinc oxide nanoparticles (ZnO–NPs), prepared by modified wet chemical method. The solid adsorption characteristics of the synthesized Alg–ZnO biocomposite were characterized by Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD), transmission electron microscopy (TEM), and UV–Vis spectroscopy. Adsorption isotherms of chromium ions on the prepared Alg–ZnO biocomposite were investigated with varying the initial concentration of Cr(VI) under different application conditions such as pH, contact time, adsorbent dosage, and temperature. Adsorption of Cr(VI) was investigated by different isotherm models such as Langmuir, Freundlich, Temkin and Dubinin–Radushkevich models. Maximum adsorption capacities (31.09 and 34.63 mg/g) were achieved by ZnO–NPs and Alg–ZnO, respectively at 25 °C. The results of isotherm models indicate the perfect applicability of Langmuir and Dubinin–Radushkevich models, revealing the dominance of monolayer and the physisorption of chromium ions onto the studied adsorbents.

A Brief Review of FT-IR Spectroscopy Studies of Sphingolipids in Human Cells

In recent years, sphingolipids have attracted significant attention due to their pivotal role in cellular functions and physiological diseases. A valuable tool for investigating the characteristics of sphingolipids can be represented via FT-IR spectroscopy, generally recognized as a very powerful technique that provides detailed biochemical information on the examined sample with the unique properties of sensitivity and accuracy. In the present paper, some fundamental aspects of sphingolipid components of human cells are summarized, and the most relevant articles devoted to the FT-IR spectroscopic studies of sphingolipids are revised. A short description of different FT-IR experimental approaches adopted for investigating sphingolipids is also given, with details about the most commonly used data analysis procedures. The present overview of FT-IR investigations, although not exhaustive, attests to the relevant role this vibrational technique has played in giving significant insight into many aspects of this fascinating class of lipids.

Modification of protein secondary structure as an indicator of radiation-induced abscopal effect: A spectroscopic investigation

In this study, we investigate the abscopal effect induced in the brain, lung and kidney as a result of partial irradiation of experimental animals with 2 Gy γ-rays. Modifications in the protein secondary structure were used as indicator for the abscopal effect. FTIR spectroscopy and analysis of the amide I and amide II absorption bands suggested possible modifications in the protein secondary structure in the brain and kidney following irradiation. Significant shift in the amide I band was recorded only in the brain. However, the amide I/amide II band area ratio for the three organs examined varied differentially in the irradiated groups as compared with the sham-irradiated group. Employing the lorentzian model to analyze the amide I band of the FTIR spectra, we dissected the amide I band into its components, each component represents one form of the protein secondary structure. Calculation of the weight percentage contribution of each of the protein secondary structure revealed decrease in the α-helix contribution associated with equivalent increase in β-sheets and turns/random coils contributions in the brain and kidney, however the response was more evident in the brain. No change in the α-helix or β-sheets contributions was reported in the lung following irradiation. The data suggest the induction of abscopal effect in the brain and kidney rather than the lung in the form of protein conformation modification. The data also indicate that the abscopal effect is comparable to the effect of direct irradiation in both of the brain and kidney.