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Møller MS. Impact of Modular Architecture on Activity of Glycoside Hydrolase Family 5 Subfamily 8 Mannanases. Molecules 2022; 27:molecules27061915. [PMID: 35335278 PMCID: PMC8952944 DOI: 10.3390/molecules27061915] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Revised: 03/08/2022] [Accepted: 03/14/2022] [Indexed: 11/25/2022] Open
Abstract
Glycoside hydrolase family 5 subfamily 8 (GH5_8) mannanases belong to Firmicutes, Actinomycetia, and Proteobacteria. The presence or absence of carbohydrate-binding modules (CBMs) present a striking difference. While various GH5_8 mannanases need a CBM for binding galactomannans, removal of the CBM did not affect activity of some, whereas it in other cases reduced the catalytic efficiency due to increased KM. Here, monomodular GH5_8 mannanases from Eubacterium siraeum (EsGH5_8) and Xanthomonas citri pv. aurantifolii (XcGH5_8) were produced and characterized to clarify if GH5_8 mannanases from Firmicutes and Proteobacteria without CBM(s) possess distinct properties. EsGH5_8 showed a remarkably high temperature optimum of 55 °C, while XcGH5_8 had an optimum at 30 °C. Both enzymes were highly active on carob galactomannan and konjac glucomannan. Notably, EsGH5_8 was equally active on both substrates, whereas XcGH5_8 preferred galactomannan. The KM values were comparable with those of catalytic domains of truncated GH5_8s, while the turn-over numbers (kcat) were in the higher end. Notably, XcGH5_8 bound to but did not degrade insoluble ivory nut mannan. The findings support the hypothesis that GH5_8 mannanases with CBMs target insoluble mannans found in plant cell walls and seeds, while monomodular GH5_8 members have soluble mannans and mannooligosaccharides as primary substrates.
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Affiliation(s)
- Marie Sofie Møller
- Applied Molecular Enzyme Chemistry, Department of Biotechnology and Biomedicine, Technical University of Denmark, DK-2800 Kgs. Lyngby, Denmark
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2
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Erkan SB, Ozcan A, Yilmazer C, Gurler HN, Karahalil E, Germec M, Yatmaz E, Kucukcetin A, Turhan I. The effects of mannanase activity on viscosity in different gums. J FOOD PROCESS PRES 2021. [DOI: 10.1111/jfpp.14820] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Selime Benemir Erkan
- Faculty of Engineering Department of Food Engineering Akdeniz University Antalya Turkey
| | - Ali Ozcan
- Faculty of Engineering Department of Food Engineering Akdeniz University Antalya Turkey
| | - Cansu Yilmazer
- Faculty of Engineering Department of Food Engineering Akdeniz University Antalya Turkey
| | - Hilal Nur Gurler
- Faculty of Engineering Department of Food Engineering Akdeniz University Antalya Turkey
| | - Ercan Karahalil
- Faculty of Engineering Department of Food Engineering Akdeniz University Antalya Turkey
| | - Mustafa Germec
- Faculty of Engineering Department of Food Engineering Akdeniz University Antalya Turkey
| | - Ercan Yatmaz
- Faculty of Engineering Department of Food Engineering Akdeniz University Antalya Turkey
- Göynük Culinary Arts Vocational School Akdeniz University Antalya Turkey
| | - Ahmet Kucukcetin
- Faculty of Engineering Department of Food Engineering Akdeniz University Antalya Turkey
| | - Irfan Turhan
- Faculty of Engineering Department of Food Engineering Akdeniz University Antalya Turkey
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3
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Møller MS, El Bouaballati S, Henrissat B, Svensson B. Functional diversity of three tandem C-terminal carbohydrate-binding modules of a β-mannanase. J Biol Chem 2021; 296:100638. [PMID: 33838183 PMCID: PMC8121702 DOI: 10.1016/j.jbc.2021.100638] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Revised: 03/29/2021] [Accepted: 04/05/2021] [Indexed: 11/16/2022] Open
Abstract
Carbohydrate active enzymes, such as those involved in plant cell wall and storage polysaccharide biosynthesis and deconstruction, often contain repeating noncatalytic carbohydrate-binding modules (CBMs) to compensate for low-affinity binding typical of protein–carbohydrate interactions. The bacterium Saccharophagus degradans produces an endo-β-mannanase of glycoside hydrolase family 5 subfamily 8 with three phylogenetically distinct family 10 CBMs located C-terminally from the catalytic domain (SdGH5_8-CBM10x3). However, the functional roles and cooperativity of these CBM domains in polysaccharide binding are not clear. To learn more, we studied the full-length enzyme, three stepwise CBM family 10 (CBM10) truncations, and GFP fusions of the individual CBM10s and all three domains together by pull-down assays, affinity gel electrophoresis, and activity assays. Only the C-terminal CBM10-3 was found to bind strongly to microcrystalline cellulose (dissociation constant, Kd = 1.48 μM). CBM10-3 and CBM10-2 bound galactomannan with similar affinity (Kd = 0.2–0.4 mg/ml), but CBM10-1 had 20-fold lower affinity for this substrate. CBM10 truncations barely affected specific activity on carob galactomannan and konjac glucomannan. Full-length SdGH5_8-CBM10x3 was twofold more active on the highly galactose-decorated viscous guar gum galactomannan and crystalline ivory nut mannan at high enzyme concentrations, but the specific activity was fourfold to ninefold reduced at low enzyme and substrate concentrations compared with the enzyme lacking CBM10-2 and CBM10-3. Comparison of activity and binding data for the different enzyme forms indicates unproductive and productive polysaccharide binding to occur. We conclude that the C-terminal-most CBM10-3 secures firm binding, with contribution from CBM10-2, which with CBM10-1 also provides spatial flexibility.
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Affiliation(s)
- Marie Sofie Møller
- Department of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark.
| | - Souad El Bouaballati
- Department of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark
| | - Bernard Henrissat
- Architecture et Fonction des Macromolécules Biologiques, CNRS, Aix-Marseille Université, Marseille, France; Department of Biological Sciences, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Birte Svensson
- Department of Biotechnology and Biomedicine, Technical University of Denmark, Lyngby, Denmark
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Rahmani N, Kashiwagi N, Lee J, Niimi-Nakamura S, Matsumoto H, Kahar P, Lisdiyanti P, Yopi, Prasetya B, Ogino C, Kondo A. Mannan endo-1,4-β-mannosidase from Kitasatospora sp. isolated in Indonesia and its potential for production of mannooligosaccharides from mannan polymers. AMB Express 2017; 7:100. [PMID: 28532122 PMCID: PMC5438323 DOI: 10.1186/s13568-017-0401-6] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2017] [Accepted: 05/10/2017] [Indexed: 11/10/2022] Open
Abstract
Mannan endo-1,4-β-mannosidase (commonly known as β-mannanase) catalyzes a random cleavage of the β-D-1,4-mannopyranosyl linkage in mannan polymers. The enzyme has been utilized in biofuel production from lignocellulose biomass, as well as in production of mannooligosaccharides (MOS) for applications in feed and food industries. We aimed to obtain a β-mannanase, for such mannan polymer utilization, from actinomycetes strains isolated in Indonesia. Strains exhibiting high mannanase activity were screened, and one strain belonging to the genus Kitasatospora was selected. We obtained a β-mannanase from this strain, and an amino acid sequence of this Kitasatospora β-mannanase showed a 58-71% similarity with the amino acid sequences of Streptomyces β-mannanases. The Kitasatospora β-mannanase showed a significant level of activity (944 U/mg) against locust bean gum (0.5% w/v) and a potential for oligosaccharide production from various mannan polymers. The β-mannanase might be beneficial particularly in the enzymatic production of MOS for applications of mannan utilization.
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Sakai K, Kimoto S, Shinzawa Y, Minezawa M, Suzuki K, Jindou S, Kato M, Shimizu M. Characterization of pH-tolerant and thermostable GH 134 β-1,4-mannanase SsGH134 possessing carbohydrate binding module 10 from Streptomyces sp. NRRL B-24484. J Biosci Bioeng 2017; 125:287-294. [PMID: 29153955 DOI: 10.1016/j.jbiosc.2017.10.009] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2017] [Revised: 09/25/2017] [Accepted: 10/15/2017] [Indexed: 10/18/2022]
Abstract
A GH 134 β-1,4-mannanase SsGH134 from Streptomyces sp. NRRL B-24484 possesses a carbohydrate binding module (CBM) 10 and a glycoside hydrolase 134 domain at the N- and C-terminal regions, respectively. Recombinant SsGH134 expressed in Escherichia coli. SsGH134 was maximally active within a pH range of 4.0-6.5 and retained >80% of this maximum after 90 min at 30°C within a pH range of 3.0-10.0. The β-1,4-mannanase activity of SsGH134 towards glucomannan was 30% of the maximal activity after an incubation at 100°C for 120 min, indicating that SsGH134 is pH-tolerant and thermostable β-1,4-mannanase. SsGH134, SsGH134-ΔCBM10 (CBM10-linker-truncated SsGH134) and SsGH134-G34W (substitution of Gly34 to Trp) bound to microcrystalline cellulose, β-mannan and chitin, regardless of the presence or absence of CBM10. These indicate that GH 134 domain strongly bind to the polysaccharides. Although deleting CBM10 increased the catalytic efficiency of the β-1,4-mannanase, its disruption decreased the pH, solvent and detergent stability of SsGH134. These findings indicate that CBM10 inhibits the β-1,4-mannanase activity of SsGH134, but it is involved in stabilizing its enzymatic activity within a neutral-to-alkaline pH range, and in the presence of various organic solvents and detergents. We believe that SsGH134 could be useful to a diverse range of industries.
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Affiliation(s)
- Kiyota Sakai
- Faculty of Agriculture, Meijo University, Nagoya, Aichi 468-8502, Japan
| | - Saran Kimoto
- Faculty of Agriculture, Meijo University, Nagoya, Aichi 468-8502, Japan
| | - Yuta Shinzawa
- Faculty of Agriculture, Meijo University, Nagoya, Aichi 468-8502, Japan
| | - Miho Minezawa
- Faculty of Agriculture, Meijo University, Nagoya, Aichi 468-8502, Japan
| | - Kengo Suzuki
- Faculty of Agriculture, Meijo University, Nagoya, Aichi 468-8502, Japan
| | - Sadanari Jindou
- Faculty of Science and Technology, Department of Culture Education, Meijo University, Nagoya, Aichi 468-8502, Japan
| | - Masashi Kato
- Faculty of Agriculture, Meijo University, Nagoya, Aichi 468-8502, Japan
| | - Motoyuki Shimizu
- Faculty of Agriculture, Meijo University, Nagoya, Aichi 468-8502, Japan.
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Production, properties, and applications of endo-β-mannanases. Biotechnol Adv 2017; 35:1-19. [DOI: 10.1016/j.biotechadv.2016.11.001] [Citation(s) in RCA: 85] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2015] [Revised: 10/12/2016] [Accepted: 11/07/2016] [Indexed: 12/27/2022]
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Ladevèze S, Laville E, Despres J, Mosoni P, Potocki-Véronèse G. Mannoside recognition and degradation by bacteria. Biol Rev Camb Philos Soc 2016; 92:1969-1990. [PMID: 27995767 DOI: 10.1111/brv.12316] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2016] [Revised: 11/01/2016] [Accepted: 11/11/2016] [Indexed: 11/29/2022]
Abstract
Mannosides constitute a vast group of glycans widely distributed in nature. Produced by almost all organisms, these carbohydrates are involved in numerous cellular processes, such as cell structuration, protein maturation and signalling, mediation of protein-protein interactions and cell recognition. The ubiquitous presence of mannosides in the environment means they are a reliable source of carbon and energy for bacteria, which have developed complex strategies to harvest them. This review focuses on the various mannosides that can be found in nature and details their structure. It underlines their involvement in cellular interactions and finally describes the latest discoveries regarding the catalytic machinery and metabolic pathways that bacteria have developed to metabolize them.
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Affiliation(s)
- Simon Ladevèze
- LISBP, Université de Toulouse, CNRS, INRA, INSA, 31077, Toulouse, France
| | - Elisabeth Laville
- LISBP, Université de Toulouse, CNRS, INRA, INSA, 31077, Toulouse, France
| | - Jordane Despres
- INRA, UR454 Microbiologie, F-63122, Saint-Genès Champanelle, France
| | - Pascale Mosoni
- INRA, UR454 Microbiologie, F-63122, Saint-Genès Champanelle, France
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8
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Kumagai Y, Uraji M, Wan K, Okuyama M, Kimura A, Hatanaka T. Molecular insights into the mechanism of thermal stability of actinomycete mannanase. FEBS Lett 2016; 590:2862-9. [DOI: 10.1002/1873-3468.12322] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2016] [Revised: 07/12/2016] [Accepted: 07/13/2016] [Indexed: 11/11/2022]
Affiliation(s)
- Yuya Kumagai
- Okayama Prefectural Technology Center for Agriculture, Forestry and Fisheries; Research Institute for Biological Sciences (RIBS); Okayama Japan
- Research Faculty of Agriculture; Hokkaido University; Sapporo Japan
| | - Misugi Uraji
- Okayama Prefectural Technology Center for Agriculture, Forestry and Fisheries; Research Institute for Biological Sciences (RIBS); Okayama Japan
| | - Kun Wan
- Okayama Prefectural Technology Center for Agriculture, Forestry and Fisheries; Research Institute for Biological Sciences (RIBS); Okayama Japan
| | - Masayuki Okuyama
- Research Faculty of Agriculture; Hokkaido University; Sapporo Japan
| | - Atsuo Kimura
- Research Faculty of Agriculture; Hokkaido University; Sapporo Japan
| | - Tadashi Hatanaka
- Okayama Prefectural Technology Center for Agriculture, Forestry and Fisheries; Research Institute for Biological Sciences (RIBS); Okayama Japan
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9
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Srivastava PK, Appu Rao G. AR, Kapoor M. Metal-dependent thermal stability of recombinant endo-mannanase (ManB-1601) belonging to family GH 26 from Bacillus sp. CFR1601. Enzyme Microb Technol 2016; 84:41-9. [DOI: 10.1016/j.enzmictec.2015.12.010] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2015] [Revised: 11/25/2015] [Accepted: 12/17/2015] [Indexed: 10/22/2022]
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Wang Y, Azhar S, Gandini R, Divne C, Ezcurra I, Aspeborg H. Biochemical characterization of the novel endo-β-mannanase AtMan5-2 from Arabidopsis thaliana. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2015; 241:151-163. [PMID: 26706067 DOI: 10.1016/j.plantsci.2015.10.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2015] [Revised: 09/08/2015] [Accepted: 10/02/2015] [Indexed: 06/05/2023]
Abstract
Plant mannanases are enzymes that carry out fundamentally important functions in cell wall metabolism during plant growth and development by digesting manno-polysaccharides. In this work, the Arabidopsis mannanase 5-2 (AtMan5-2) from a previously uncharacterized subclade of glycoside hydrolase family 5 subfamily 7 (GH5_7) has been heterologously produced in Pichia pastoris. Purified recombinant AtMan5-2 is a glycosylated protein with an apparent molecular mass of 50kDa, a pH optimum of 5.5-6.0 and a temperature optimum of 25°C. The enzyme exhibits high substrate affinity and catalytic efficiency on mannan substrates with main chains containing both glucose and mannose units such as konjac glucomannan and spruce galactoglucomannan. Product analysis of manno-oligosaccharide hydrolysis shows that AtMan5-2 requires at least six substrate-binding subsites. No transglycosylation activity for the recombinant enzyme was detected in the present study. Our results demonstrate diversification of catalytic function among members in the Arabidopsis GH5_7 subfamily.
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Affiliation(s)
- Yang Wang
- From KTH Royal Institute of Technology, School of Biotechnology, Division of Industrial Biotechnology, AlbaNova University Center, 106 91 Stockholm, Sweden
| | - Shoaib Azhar
- From Wallenberg Wood Science Center, Department of Fiber and Polymer Technology, KTH Royal Institute of Technology, 100 44 Stockholm, Sweden
| | - Rosaria Gandini
- From KTH Royal Institute of Technology, School of Biotechnology, Division of Industrial Biotechnology, AlbaNova University Center, 106 91 Stockholm, Sweden; From Karolinska Institute, Department of Medical Biochemistry and Biophysics, Scheelelaboratoriet, Scheeles väg 2, 17177 Stockholm, Sweden
| | - Christina Divne
- From KTH Royal Institute of Technology, School of Biotechnology, Division of Industrial Biotechnology, AlbaNova University Center, 106 91 Stockholm, Sweden; From Karolinska Institute, Department of Medical Biochemistry and Biophysics, Scheelelaboratoriet, Scheeles väg 2, 17177 Stockholm, Sweden
| | - Ines Ezcurra
- From KTH Royal Institute of Technology, School of Biotechnology, Division of Industrial Biotechnology, AlbaNova University Center, 106 91 Stockholm, Sweden
| | - Henrik Aspeborg
- From KTH Royal Institute of Technology, School of Biotechnology, Division of Industrial Biotechnology, AlbaNova University Center, 106 91 Stockholm, Sweden.
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Morrill J, Kulcinskaja E, Sulewska AM, Lahtinen S, Stålbrand H, Svensson B, Abou Hachem M. The GH5 1,4-β-mannanase from Bifidobacterium animalis subsp. lactis Bl-04 possesses a low-affinity mannan-binding module and highlights the diversity of mannanolytic enzymes. BMC BIOCHEMISTRY 2015; 16:26. [PMID: 26558435 PMCID: PMC4642672 DOI: 10.1186/s12858-015-0055-4] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/24/2015] [Accepted: 10/29/2015] [Indexed: 12/18/2022]
Abstract
Background β-Mannans are abundant and diverse plant structural and storage polysaccharides. Certain human gut microbiota members including health-promoting Bifidobacterium spp. catabolize dietary mannans. Little insight is available on the enzymology of mannan deconstruction in the gut ecological niche. Here, we report the biochemical properties of the first family 5 subfamily 8 glycoside hydrolase (GH5_8) mannanase from the probiotic bacterium Bifidobacterium animalis subsp. lactis Bl-04 (BlMan5_8). Results BlMan5_8 possesses a novel low affinity carbohydrate binding module (CBM) specific for soluble mannan and displays the highest catalytic efficiency reported to date for a GH5 mannanase owing to a very high kcat (1828 ± 87 s-1) and a low Km (1.58 ± 0.23 g · L-1) using locust bean galactomannan as substrate. The novel CBM of BlMan5_8 mediates increased binding to soluble mannan based on affinity electrophoresis. Surface plasmon resonance analysis confirmed the binding of the CBM10 to manno-oligosaccharides, albeit with slightly lower affinity than the catalytic module of the enzyme. This is the first example of a low-affinity mannan-specific CBM, which forms a subfamily of CBM10 together with close homologs present only in mannanases. Members of this new subfamily lack an aromatic residue mediating binding to insoluble cellulose in canonical CBM10 members consistent with the observed low mannan affinity. Conclusion BlMan5_8 is evolved for efficient deconstruction of soluble mannans, which is reflected by an exceptionally low Km and the presence of an atypical low affinity CBM, which increases binding to specifically to soluble mannan while causing minimal decrease in catalytic efficiency as opposed to enzymes with canonical mannan binding modules. These features highlight fine tuning of catalytic and binding properties to support specialization towards a preferred substrate, which is likely to confer an advantage in the adaptation to competitive ecological niches. Electronic supplementary material The online version of this article (doi:10.1186/s12858-015-0055-4) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Johan Morrill
- Department of Biochemistry and Structural Biology, Center for Chemistry and Chemical Engineering, Lund University, P.O. Box 124, S-221 00, Lund, Sweden
| | - Evelina Kulcinskaja
- Department of Biochemistry and Structural Biology, Center for Chemistry and Chemical Engineering, Lund University, P.O. Box 124, S-221 00, Lund, Sweden
| | - Anna Maria Sulewska
- Enzyme and Protein Chemistry (EPC), Department of Systems Biology, Technical University of Denmark (DTU), Søltofts Plads, building 224, DK-2800, Kgs Lyngby, Denmark.,Current address: Biochemistry and Bioprocessing, Department of Food Science, University of Copenhagen, Rolighedsvej 30, DK-1958, Fredriksberg C, Denmark
| | - Sampo Lahtinen
- Active Nutrition, DuPont Nutrition & Health, Sokeritehtaantie 20, 02460, Kantvik, Finland
| | - Henrik Stålbrand
- Department of Biochemistry and Structural Biology, Center for Chemistry and Chemical Engineering, Lund University, P.O. Box 124, S-221 00, Lund, Sweden
| | - Birte Svensson
- Enzyme and Protein Chemistry (EPC), Department of Systems Biology, Technical University of Denmark (DTU), Søltofts Plads, building 224, DK-2800, Kgs Lyngby, Denmark
| | - Maher Abou Hachem
- Enzyme and Protein Chemistry (EPC), Department of Systems Biology, Technical University of Denmark (DTU), Søltofts Plads, building 224, DK-2800, Kgs Lyngby, Denmark.
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Chen CY, Huang YC, Yang TY, Jian JY, Chen WL, Yang CH. Degradation of konjac glucomannan by Thermobifida fusca thermostable β-mannanase from yeast transformant. Int J Biol Macromol 2015; 82:1-6. [PMID: 26476245 DOI: 10.1016/j.ijbiomac.2015.10.008] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2015] [Revised: 10/01/2015] [Accepted: 10/03/2015] [Indexed: 11/19/2022]
Abstract
Native konjac glucomannan was used as the substrate for thermophilic actinomycetes, Thermobifida fusca BCRC19214, to produce β-mannanase. The β-mannanase was purified and five internal amino acid sequences were determined by LC-MS/MS. These sequences had high homology with the β-mannanase from T. fusca YX. The tfm gene which encoded the β-mannanase was cloned, sequenced and heterologous expressed in Yarrowia lipolytica P01 g expression system. Recombinant heterologous expression resulted in extracellular β-mannanase production at levels as high as 3.16 U/ml in the culture broth within 48 h cultivation. The recombinant β-mannanase from Y. lipolytica transformant had superior thermal property. The optimal temperature of the recombinant β-mannanase from Y. lipolytica transformant (pYLSC1-tfm) was 80°C. When native konjac glucomannan was incubated with the recombinant β-mannanase from Y. lipolytica transformant (pYLSC1-tfm) at 50°C, there was a fast decrease of viscosity happen during the initial phase of reaction. This viscosity reduction was accompanied by an increase of reducing sugars. The surface of konjac glucomannan film became smooth. After 24h of treatment, the DPw of native konjac glucomannan decreased from 6,435,139 to 3089.
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Affiliation(s)
- Cheng-Yu Chen
- Department of Cosmetic Science, Providence University, Taichung 43301, Taiwan; Graduate Institute of Biotechnology, National Chung Hsing University, Taichung 40227, Taiwan
| | - Yu-Chun Huang
- Department of Cosmetic Science, Providence University, Taichung 43301, Taiwan
| | - Ting-Ya Yang
- Department of Cosmetic Science, Providence University, Taichung 43301, Taiwan
| | - Jhen-Yi Jian
- Department of Cosmetic Science, Providence University, Taichung 43301, Taiwan
| | - Wei-Lin Chen
- Department of Cosmetic Science, Providence University, Taichung 43301, Taiwan; Department of Applied Chemistry, Providence University, Taichung 43301, Taiwan
| | - Chao-Hsun Yang
- Department of Cosmetic Science, Providence University, Taichung 43301, Taiwan; Department of Applied Chemistry, Providence University, Taichung 43301, Taiwan.
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13
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Kumagai Y, Yamashita K, Tagami T, Uraji M, Wan K, Okuyama M, Yao M, Kimura A, Hatanaka T. The loop structure of Actinomycete glycoside hydrolase family 5 mannanases governs substrate recognition. FEBS J 2015; 282:4001-14. [PMID: 26257335 DOI: 10.1111/febs.13401] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2015] [Revised: 07/23/2015] [Accepted: 08/05/2015] [Indexed: 02/01/2023]
Abstract
Endo-β-1,4-mannanases from Streptomyces thermolilacinus (StMan) and Thermobifida fusca (TfMan) demonstrated different substrate specificities. StMan hydrolyzed galactosylmannooligosaccharide (GGM5; 6(III) ,6(IV) -α-d-galactosyl mannopentaose) to GGM3 and M2, whereas TfMan hydrolyzed GGM5 to GGM4 and M1. To determine the region involved in the substrate specificity, we constructed chimeric enzymes of StMan and TfMan and evaluated their substrate specificities. Moreover, the crystal structure of the catalytic domain of StMan (StMandC) and the complex structure of the inactive mutant StE273AdC with M6 were solved at resolutions of 1.60 and 1.50 Å, respectively. Structural comparisons of StMandC and the catalytic domain of TfMan lead to the identification of a subsite around -1 in StMandC that could accommodate a galactose branch. These findings demonstrate that the two loops (loop7 and loop8) are responsible for substrate recognition in GH5 actinomycete mannanases. In particular, Trp281 in loop7 of StMan, which is located in a narrow and deep cleft, plays an important role in its affinity toward linear substrates. Asp310 in loop8 of StMan specifically bound to the galactosyl unit in the -1 subsite.
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Affiliation(s)
- Yuya Kumagai
- Okayama Prefectural Technology Center for Agriculture, Forestry and Fisheries, Research Institute for Biological Sciences (RIBS), Okayama, Japan.,Research Faculty of Agriculture, Hokkaido University, Sapporo, Japan
| | - Keitaro Yamashita
- Graduate School of Life Science, Hokkaido University, Sapporo, Japan
| | - Takayoshi Tagami
- Research Faculty of Agriculture, Hokkaido University, Sapporo, Japan
| | - Misugi Uraji
- Okayama Prefectural Technology Center for Agriculture, Forestry and Fisheries, Research Institute for Biological Sciences (RIBS), Okayama, Japan
| | - Kun Wan
- Okayama Prefectural Technology Center for Agriculture, Forestry and Fisheries, Research Institute for Biological Sciences (RIBS), Okayama, Japan
| | - Masayuki Okuyama
- Research Faculty of Agriculture, Hokkaido University, Sapporo, Japan
| | - Min Yao
- Graduate School of Life Science, Hokkaido University, Sapporo, Japan.,Faculty of Advanced Life Science, Hokkaido University, Sapporo, Japan
| | - Atsuo Kimura
- Research Faculty of Agriculture, Hokkaido University, Sapporo, Japan
| | - Tadashi Hatanaka
- Okayama Prefectural Technology Center for Agriculture, Forestry and Fisheries, Research Institute for Biological Sciences (RIBS), Okayama, Japan
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Srivastava PK, Kapoor M. COST-EFFECTIVE ENDO-MANNANASE FROMBacillussp. CFR1601 AND ITS APPLICATION IN GENERATION OF OLIGOSACCHARIDES FROM GUAR GUM AND AS DETERGENT ADDITIVE. Prep Biochem Biotechnol 2013; 44:392-417. [DOI: 10.1080/10826068.2013.833108] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Kumagai Y, Kawakami K, Uraji M, Hatanaka T. Effect of the binding of bivalent ion to the calcium-binding site responsible for the thermal stability of actinomycete mannanase: Potential use in production of functional mannooligosaccharides. ACTA ACUST UNITED AC 2013. [DOI: 10.1016/j.molcatb.2013.05.001] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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