1
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Li Y, Yang Y, Zheng Q, Liu Y, Wang H, Song S, Zhao P. Dynamical graph neural network with attention mechanism for epilepsy detection using single channel EEG. Med Biol Eng Comput 2024; 62:307-326. [PMID: 37804386 DOI: 10.1007/s11517-023-02914-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2022] [Accepted: 08/16/2023] [Indexed: 10/09/2023]
Abstract
Epilepsy is a chronic brain disease, and identifying seizures based on electroencephalogram (EEG) signals would be conducive to implement interventions to help patients reduce impairment and improve quality of life. In this paper, we propose a classification algorithm to apply dynamical graph neural network with attention mechanism to single channel EEG signals. Empirical mode decomposition (EMD) are adopted to construct graphs and the optimal adjacency matrix is obtained by model optimization. A multilayer dynamic graph neural network with attention mechanism is proposed to learn more discriminative graph features. The MLP-pooling structure is proposed to fuse graph features. We performed 12 classification tasks on the epileptic EEG database of the University of Bonn, and experimental results showed that using 25 runs of ten-fold cross-validation produced the best classification results with an average of 99.83[Formula: see text] accuracy, 99.91[Formula: see text] specificity, 99.78[Formula: see text] sensitivity, 99.87[Formula: see text] precision, and 99.47[Formula: see text] [Formula: see text] score for the 12 classification tasks.
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Affiliation(s)
- Yang Li
- School of Information Science and Engineering, Shandong University, Qingdao, 266237, China
| | - Yang Yang
- School of Information Science and Engineering, Shandong University, Qingdao, 266237, China.
| | - Qinghe Zheng
- School of Information Science and Engineering, Shandong University, Qingdao, 266237, China
| | - Yunxia Liu
- Center for Optics Research and Engineering, Shandong University, Qingdao, 266237, China
| | - Hongjun Wang
- School of Information Science and Engineering, Shandong University, Qingdao, 266237, China.
- Public (Innovation) Experimental Teaching Center, Shandong University, Qingdao, 266237, China.
| | - Shangling Song
- The second hospital of Shandong University, Jinan, 250033, China
| | - Penghui Zhao
- School of Information Science and Engineering, Shandong University, Qingdao, 266237, China
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2
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Liu D, Dong X, Bian D, Zhou W. Epileptic Seizure Prediction Using Attention Augmented Convolutional Network. Int J Neural Syst 2023; 33:2350054. [PMID: 37675593 DOI: 10.1142/s0129065723500545] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/08/2023]
Abstract
Early seizure prediction is crucial for epilepsy patients to reduce accidental injuries and improve their quality of life. Identifying pre-ictal EEG from the inter-ictal state is particularly challenging due to their nonictal nature and remarkable similarities. In this study, a novel epileptic seizure prediction method is proposed based on multi-head attention (MHA) augmented convolutional neural network (CNN) to address the issue of CNN's limit of capturing global information of input signals. First, data enhancement is performed on original EEG recordings to balance the pre-ictal and inter-ictal EEG data, and the EEG recordings are sliced into 6-second-long EEG segments. Subsequently, EEG time-frequency distribution is obtained using Stockwell transform (ST), and the attention augmented convolutional network is employed for feature extraction and classification. Finally, post-processing is utilized to reduce the false prediction rate (FPR). The CHB-MIT EEG database was used to evaluate the system. The validation results showed a segment-based sensitivity of 98.24% and an event-based sensitivity of 94.78% with a FPR of 0.05/h were yielded, respectively. The satisfying results of the proposed method demonstrate its possible potential for clinical applications.
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Affiliation(s)
- Dongsheng Liu
- School of Microelectronics, Shandong University, Jinan 250100, P. R. China
| | - Xingchen Dong
- School of Microelectronics, Shandong University, Jinan 250100, P. R. China
| | - Dong Bian
- School of Microelectronics, Shandong University, Jinan 250100, P. R. China
| | - Weidong Zhou
- School of Microelectronics, Shandong University, Jinan 250100, P. R. China
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3
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Ilias L, Doukas G, Kontoulis M, Alexakis K, Michalitsi-Psarrou A, Ntanos C, Askounis D. Overview of methods and available tools used in complex brain disorders. OPEN RESEARCH EUROPE 2023; 3:152. [PMID: 38389699 PMCID: PMC10882203 DOI: 10.12688/openreseurope.16244.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 07/25/2023] [Indexed: 02/24/2024]
Abstract
Complex brain disorders, including Alzheimer's dementia, sleep disorders, and epilepsy, are chronic conditions that have high prevalence individually and in combination, increasing mortality risk, and contributing to the socioeconomic burden of patients, their families and, their communities at large. Although some literature reviews have been conducted mentioning the available methods and tools used for supporting the diagnosis of complex brain disorders and processing different files, there are still limitations. Specifically, these research works have focused primarily on one single brain disorder, i.e., sleep disorders or dementia or epilepsy. Additionally, existing research initiatives mentioning some tools, focus mainly on one single type of data, i.e., electroencephalography (EEG) signals or actigraphies or Magnetic Resonance Imaging, and so on. To tackle the aforementioned limitations, this is the first study conducting a comprehensive literature review of the available methods used for supporting the diagnosis of multiple complex brain disorders, i.e., Alzheimer's dementia, sleep disorders, epilepsy. Also, to the best of our knowledge, we present the first study conducting a comprehensive literature review of all the available tools, which can be exploited for processing multiple types of data, including EEG, actigraphies, and MRIs, and receiving valuable forms of information which can be used for differentiating people in a healthy control group and patients suffering from complex brain disorders. Additionally, the present study highlights both the benefits and limitations of the existing available tools.
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Affiliation(s)
- Loukas Ilias
- Decision Support Systems Laboratory, School of Electrical and Computer Engineering, National Technical University of Athens, Athens, 15773, Greece
| | - George Doukas
- Decision Support Systems Laboratory, School of Electrical and Computer Engineering, National Technical University of Athens, Athens, 15773, Greece
| | - Michael Kontoulis
- Decision Support Systems Laboratory, School of Electrical and Computer Engineering, National Technical University of Athens, Athens, 15773, Greece
| | - Konstantinos Alexakis
- Decision Support Systems Laboratory, School of Electrical and Computer Engineering, National Technical University of Athens, Athens, 15773, Greece
| | - Ariadni Michalitsi-Psarrou
- Decision Support Systems Laboratory, School of Electrical and Computer Engineering, National Technical University of Athens, Athens, 15773, Greece
| | - Christos Ntanos
- Decision Support Systems Laboratory, School of Electrical and Computer Engineering, National Technical University of Athens, Athens, 15773, Greece
| | - Dimitris Askounis
- Decision Support Systems Laboratory, School of Electrical and Computer Engineering, National Technical University of Athens, Athens, 15773, Greece
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Al-hajjar ALN, Al-Qurabat AKM. An overview of machine learning methods in enabling IoMT-based epileptic seizure detection. THE JOURNAL OF SUPERCOMPUTING 2023; 79:1-48. [PMID: 37359338 PMCID: PMC10123593 DOI: 10.1007/s11227-023-05299-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Accepted: 04/12/2023] [Indexed: 06/28/2023]
Abstract
The healthcare industry is rapidly automating, in large part because of the Internet of Things (IoT). The sector of the IoT devoted to medical research is sometimes called the Internet of Medical Things (IoMT). Data collecting and processing are the fundamental components of all IoMT applications. Machine learning (ML) algorithms must be included into IoMT immediately due to the vast quantity of data involved in healthcare and the value that precise forecasts have. In today's world, together, IoMT, cloud services, and ML techniques have become effective tools for solving many problems in the healthcare sector, such as epileptic seizure monitoring and detection. One of the biggest hazards to people's lives is epilepsy, a lethal neurological condition that has become a global issue. To prevent the deaths of thousands of epileptic patients each year, there is a critical necessity for an effective method for detecting epileptic seizures at their earliest stage. Numerous medical procedures, including epileptic monitoring, diagnosis, and other procedures, may be carried out remotely with the use of IoMT, which will reduce healthcare expenses and improve services. This article seeks to act as both a collection and a review of the different cutting-edge ML applications for epilepsy detection that are presently being combined with IoMT.
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Affiliation(s)
| | - Ali Kadhum M. Al-Qurabat
- Department of Computer Science, College of Science for Women, University of Babylon, Babylon, Iraq
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5
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Epileptic Seizure Detection Using Machine Learning: Taxonomy, Opportunities, and Challenges. Diagnostics (Basel) 2023; 13:diagnostics13061058. [PMID: 36980366 PMCID: PMC10047386 DOI: 10.3390/diagnostics13061058] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2022] [Revised: 01/27/2023] [Accepted: 01/31/2023] [Indexed: 03/14/2023] Open
Abstract
Epilepsy is a life-threatening neurological brain disorder that gives rise to recurrent unprovoked seizures. It occurs due to abnormal chemical changes in our brains. For many years, studies have been conducted to support the automatic diagnosis of epileptic seizures for clinicians’ ease. For that, several studies entail machine learning methods for early predicting epileptic seizures. Mainly, feature extraction methods have been used to extract the right features from the EEG data generated by the EEG machine. Then various machine learning classifiers are used for the classification process. This study provides a systematic literature review of the feature selection process and classification performance. This review was limited to finding the most used feature extraction methods and the classifiers used for accurate classification of normal to epileptic seizures. The existing literature was examined from well-known repositories such as MDPI, IEEE Xplore, Wiley, Elsevier, ACM, Springer link, and others. Furthermore, a taxonomy was created that recapitulates the state-of-the-art used solutions for this problem. We also studied the nature of different benchmark and unbiased datasets and gave a rigorous analysis of the working of classifiers. Finally, we concluded the research by presenting the gaps, challenges, and opportunities that can further help researchers predict epileptic seizures.
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Zhang T, Chen W, Chen X. Identifying epileptic EEGs and congestive heart failure ECGs under unified framework of wavelet scattering transform, bidirectional weighted (2D)2PCA and KELM. Biocybern Biomed Eng 2023. [DOI: 10.1016/j.bbe.2023.01.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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Nafea MS, Ismail ZH. Supervised Machine Learning and Deep Learning Techniques for Epileptic Seizure Recognition Using EEG Signals-A Systematic Literature Review. Bioengineering (Basel) 2022; 9:781. [PMID: 36550987 PMCID: PMC9774931 DOI: 10.3390/bioengineering9120781] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2022] [Revised: 10/07/2022] [Accepted: 10/11/2022] [Indexed: 12/13/2022] Open
Abstract
Electroencephalography (EEG) is a complicated, non-stationary signal that requires extensive preprocessing and feature extraction approaches to be accurately analyzed. In recent times, Deep learning (DL) has shown great promise in exploiting the characteristics of EEG signals as it can learn relevant features from raw data autonomously. Although studies involving DL have become more common in the last two years, the topic of whether DL truly delivers advantages over conventional Machine learning (ML) methodologies remains unsettled. This study aims to present a detailed overview of the main challenges in the field of seizure detection, prediction, and classification utilizing EEG data, and the approaches taken to solve them using ML and DL methods. A systematic review was conducted surveying peer-reviewed publications published between 2017 and 16 July 2022 using two scientific databases (Web of Science and Scopus) totaling 6822 references after discarding duplicate publications. Whereas 2262 articles were screened based on the title, abstract, and keywords, only 214 were eligible for full-text assessment. A total of 91 papers have been included in this survey after meeting the eligible inclusion and exclusion criteria. The most significant findings from the review are summarized, and several important concepts involving ML and DL for seizure detection, prediction, and classification are discussed in further depth. This review aims to learn more about the different approaches for identifying different types and stages of epileptic seizures, which may then be employed to enhance the lives of epileptic patients in the future, as well as aid experts in the field.
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Affiliation(s)
- Mohamed Sami Nafea
- Computer Engineering Department, College of Engineering and Technology, Arab Academy for Science and Technology (AAST), Cairo 2033, Egypt
- Malaysia-Japan International Institute of Technology, Universiti Teknologi Malaysia, Jalan Sultan Yahya Petra, Kuala Lumpur 54100, Malaysia
| | - Zool Hilmi Ismail
- Malaysia-Japan International Institute of Technology, Universiti Teknologi Malaysia, Jalan Sultan Yahya Petra, Kuala Lumpur 54100, Malaysia
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N.J. S, M.S.P. S, S. TG. EEG-based classification of normal and seizure types using relaxed local neighbour difference pattern and artificial neural network. Knowl Based Syst 2022. [DOI: 10.1016/j.knosys.2022.108508] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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9
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Classification of EEG Signals for Prediction of Epileptic Seizures. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12147251] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Epilepsy is a common brain disorder that causes patients to face multiple seizures in a single day. Around 65 million people are affected by epilepsy worldwide. Patients with focal epilepsy can be treated with surgery, whereas generalized epileptic seizures can be managed with medications. It has been noted that in more than 30% of cases, these medications fail to control epileptic seizures, resulting in accidents and limiting the patient’s life. Predicting epileptic seizures in such patients prior to the commencement of an oncoming seizure is critical so that the seizure can be treated with preventive medicines before it occurs. Electroencephalogram (EEG) signals of patients recorded to observe brain electrical activity during a seizure can be quite helpful in predicting seizures. Researchers have proposed methods that use machine and/or deep learning techniques to predict epileptic seizures using scalp EEG signals; however, prediction of seizures with increased accuracy is still a challenge. Therefore, we propose a three-step approach. It includes preprocessing of scalp EEG signals with PREP pipeline, which is a more sophisticated alternative to basic notch filtering. This method uses a regression-based technique to further enhance the SNR, with a combination of handcrafted, i.e., statistical features such as temporal mean, variance, and skewness, and automated features using CNN, followed by classification of interictal state and preictal state segments using LSTM to predict seizures. We train and validate our proposed technique on the CHB-MIT scalp EEG dataset and achieve accuracy of 94%, sensitivity of 93.8%, and 91.2% specificity. The proposed technique achieves better sensitivity and specificity than existing methods.
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10
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Artifact Removal from EEG signals using Regenerative Multi-Dimensional Singular Value Decomposition and Independent Component Analysis. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2021.103452] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Enhanced Feature Extraction-based CNN Approach for Epileptic Seizure Detection from EEG Signals. JOURNAL OF HEALTHCARE ENGINEERING 2022; 2022:3491828. [PMID: 35340257 PMCID: PMC8942662 DOI: 10.1155/2022/3491828] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Revised: 01/30/2022] [Accepted: 02/05/2022] [Indexed: 11/18/2022]
Abstract
One of the most common neurological disorders is epilepsy, which disturbs the nerve cell activity in the brain, causing seizures. Electroencephalography (EEG) signals are used to detect epilepsy and are considered standard techniques to diagnose epilepsy conditions. EEG monitors and records the brain activity of epilepsy patients, and these recordings are used in the diagnosis of epilepsy. However, extracting the information from the EEG recordings manually for detecting epileptic seizures is a difficult cumbersome, error-prone, and labor-intensive task. These negative attributes of the manual process increase the demand for implementing an automated model for the seizure detection process, which can classify seizure and nonseizures from EEG signals to help in the timely identification of epilepsy. Recently, deep learning (DL) and machine learning (ML) techniques have been used in the automatic detection of epileptic seizures because of their superior classification abilities. ML and DL algorithms can accurately classify different seizure conditions from large-scale EEG data and provide appropriate results for neurologists. This work presents a feature extraction-based convolutional neural network (CNN) to sense and classify different types of epileptic seizures from EEG signals. Different features are analyzed to classify seizures via EEG signals. Simulation analysis was managed to investigate the classification performance of the hybrid CNN-RNN model in terms of different achievement metrics such as accuracy, precision, recall, f1 score, and false-positive rate. The results validate the efficacy of the CNN-RNN model for seizure detection.
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Abenna S, Nahid M, Bajit A. Motor imagery based brain-computer interface: improving the EEG classification using Delta rhythm and LightGBM algorithm. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2021.103102] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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13
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Automatic Diagnosis of Epileptic Seizures in EEG Signals Using Fractal Dimension Features and Convolutional Autoencoder Method. BIG DATA AND COGNITIVE COMPUTING 2021. [DOI: 10.3390/bdcc5040078] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
This paper proposes a new method for epileptic seizure detection in electroencephalography (EEG) signals using nonlinear features based on fractal dimension (FD) and a deep learning (DL) model. Firstly, Bonn and Freiburg datasets were used to perform experiments. The Bonn dataset consists of binary and multi-class classification problems, and the Freiburg dataset consists of two-class EEG classification problems. In the preprocessing step, all datasets were prepossessed using a Butterworth band pass filter with 0.5–60 Hz cut-off frequency. Then, the EEG signals of the datasets were segmented into different time windows. In this section, dual-tree complex wavelet transform (DT-CWT) was used to decompose the EEG signals into the different sub-bands. In the following section, in order to feature extraction, various FD techniques were used, including Higuchi (HFD), Katz (KFD), Petrosian (PFD), Hurst exponent (HE), detrended fluctuation analysis (DFA), Sevcik, box counting (BC), multiresolution box-counting (MBC), Margaos-Sun (MSFD), multifractal DFA (MF-DFA), and recurrence quantification analysis (RQA). In the next step, the minimum redundancy maximum relevance (mRMR) technique was used for feature selection. Finally, the k-nearest neighbors (KNN), support vector machine (SVM), and convolutional autoencoder (CNN-AE) were used for the classification step. In the classification step, the K-fold cross-validation with k = 10 was employed to demonstrate the effectiveness of the classifier methods. The experiment results show that the proposed CNN-AE method achieved an accuracy of 99.736% and 99.176% for the Bonn and Freiburg datasets, respectively.
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Detection of preictal state in epileptic seizures using ensemble classifier. Epilepsy Res 2021; 178:106818. [PMID: 34847427 DOI: 10.1016/j.eplepsyres.2021.106818] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2021] [Revised: 10/10/2021] [Accepted: 11/12/2021] [Indexed: 12/30/2022]
Abstract
OBJECTIVE Epilepsy affected patient experiences more than one frequency seizures which can not be treated with medication or surgical procedures in 30% of the cases. Therefore, an early prediction of these seizures is inevitable for these cases to control them with therapeutic interventions. METHODS In recent years, researchers have proposed multiple deep learning based methods for detection of preictal state in electroencephalogram (EEG) signals, however, accurate detection of start of preictal state remains a challenge. We propose a novel ensemble classifier based method that gets the comprehensive feature set as input and combines three different classifiers to detect the preictal state. RESULTS We have applied the proposed method on the publicly available scalp EEG dataset CHBMIT of 22 subjects. An average accuracy of 94.31% with sensitivity and specificity of 94.73% and 93.72% respectively has been achieved with the method proposed in this study. CONCLUSIONS Proposed study utilizes the preprocessing techniques for noise removal, combines deep learning based and handcrafted features and an ensemble classifier for detection of start of preictal state. Proposed method gives better results in terms of accuracy, sensitivity, and specificity.
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Malekzadeh A, Zare A, Yaghoobi M, Kobravi HR, Alizadehsani R. Epileptic Seizures Detection in EEG Signals Using Fusion Handcrafted and Deep Learning Features. SENSORS (BASEL, SWITZERLAND) 2021; 21:7710. [PMID: 34833780 PMCID: PMC8624422 DOI: 10.3390/s21227710] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/13/2021] [Revised: 11/15/2021] [Accepted: 11/15/2021] [Indexed: 12/12/2022]
Abstract
Epilepsy is a brain disorder disease that affects people's quality of life. Electroencephalography (EEG) signals are used to diagnose epileptic seizures. This paper provides a computer-aided diagnosis system (CADS) for the automatic diagnosis of epileptic seizures in EEG signals. The proposed method consists of three steps, including preprocessing, feature extraction, and classification. In order to perform the simulations, the Bonn and Freiburg datasets are used. Firstly, we used a band-pass filter with 0.5-40 Hz cut-off frequency for removal artifacts of the EEG datasets. Tunable-Q Wavelet Transform (TQWT) is used for EEG signal decomposition. In the second step, various linear and nonlinear features are extracted from TQWT sub-bands. In this step, various statistical, frequency, and nonlinear features are extracted from the sub-bands. The nonlinear features used are based on fractal dimensions (FDs) and entropy theories. In the classification step, different approaches based on conventional machine learning (ML) and deep learning (DL) are discussed. In this step, a CNN-RNN-based DL method with the number of layers proposed is applied. The extracted features have been fed to the input of the proposed CNN-RNN model, and satisfactory results have been reported. In the classification step, the K-fold cross-validation with k = 10 is employed to demonstrate the effectiveness of the proposed CNN-RNN classification procedure. The results revealed that the proposed CNN-RNN method for Bonn and Freiburg datasets achieved an accuracy of 99.71% and 99.13%, respectively.
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Affiliation(s)
- Anis Malekzadeh
- Department of Electrical Engineering, Gonabad Branch, Islamic Azad University, Gonabad 6518115743, Iran;
| | - Assef Zare
- Department of Electrical Engineering, Gonabad Branch, Islamic Azad University, Gonabad 6518115743, Iran;
| | - Mahdi Yaghoobi
- Department of Electrical Engineering, Mashhad Branch, Islamic Azad University, Mashhad 9187147578, Iran; (M.Y.); (H.-R.K.)
| | - Hamid-Reza Kobravi
- Department of Electrical Engineering, Mashhad Branch, Islamic Azad University, Mashhad 9187147578, Iran; (M.Y.); (H.-R.K.)
| | - Roohallah Alizadehsani
- Institute for Intelligent Systems Research and Innovation (IISRI), Deakin University, Waurn Ponds, VIC 3216, Australia;
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16
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Maimaiti B, Meng H, Lv Y, Qiu J, Zhu Z, Xie Y, Li Y, Yu-Cheng, Zhao W, Liu J, Li M. An Overview of EEG-based Machine Learning Methods in Seizure Prediction and Opportunities for Neurologists in this Field. Neuroscience 2021; 481:197-218. [PMID: 34793938 DOI: 10.1016/j.neuroscience.2021.11.017] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2021] [Revised: 11/04/2021] [Accepted: 11/08/2021] [Indexed: 11/16/2022]
Abstract
The unpredictability of epileptic seizures is one of the most problematic aspects of the field of epilepsy. Methods or devices capable of detecting seizures minutes before they occur may help prevent injury or even death and significantly improve the quality of life. Machine learning (ML) is an emerging technology that can markedly enhance algorithm performance by interpreting data. ML has gained increasing attention from medical researchers in recent years. Its epilepsy applications range from the localization of the epileptic region, predicting the medical or surgical outcome of epilepsy, and automated electroencephalography (EEG) analysis to seizure prediction. While ML has good prospects with regard to detecting epileptic seizures via EEG signals, many clinicians are still unfamiliar with this field. This work briefly summarizes the history and recent significant progress made in this field and clarifies the essential components of the automatic seizure detection system using ML methodologies for clinicians. This review also proposes how neurologists can actively contribute to ensure improvements in seizure prediction using EEG-based ML.
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Affiliation(s)
- Buajieerguli Maimaiti
- Department of Neurology and Neuroscience Center, First Hospital of Jilin University, Changchun, Jilin, People's Republic of China
| | - Hongmei Meng
- Department of Neurology and Neuroscience Center, First Hospital of Jilin University, Changchun, Jilin, People's Republic of China.
| | - Yudan Lv
- Department of Neurology and Neuroscience Center, First Hospital of Jilin University, Changchun, Jilin, People's Republic of China
| | - Jiqing Qiu
- Department of Neurological Surgery, First Hospital of Jilin University, Changchun, Jilin, People's Republic of China
| | - Zhanpeng Zhu
- Department of Neurological Surgery, First Hospital of Jilin University, Changchun, Jilin, People's Republic of China
| | - Yinyin Xie
- Department of Neurology and Neuroscience Center, First Hospital of Jilin University, Changchun, Jilin, People's Republic of China
| | - Yue Li
- Department of Neurology and Neuroscience Center, First Hospital of Jilin University, Changchun, Jilin, People's Republic of China
| | - Yu-Cheng
- Department of Neurology and Neuroscience Center, First Hospital of Jilin University, Changchun, Jilin, People's Republic of China
| | - Weixuan Zhao
- Department of Neurology and Neuroscience Center, First Hospital of Jilin University, Changchun, Jilin, People's Republic of China
| | - Jiayu Liu
- Department of Neurology and Neuroscience Center, First Hospital of Jilin University, Changchun, Jilin, People's Republic of China
| | - Mingyang Li
- Department of Communication Engineering, Jilin University, Changchun, Jilin, People's Republic of China.
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17
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Kayabekir M, Yağanoğlu M. The relationship between snoring sounds and EEG signals on polysomnography. Sleep Breath 2021; 26:1219-1226. [PMID: 34697670 DOI: 10.1007/s11325-021-02516-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Revised: 10/06/2021] [Accepted: 10/11/2021] [Indexed: 10/20/2022]
Abstract
PURPOSE The aim of this study was to analyze the relationship of snoring sound signals obtained by polysomnography (PSG) in the sleep laboratory with cortical EEG (6 channel) signals to find answers to two important questions that have been covered to a limited extent in the literature: (1) Would the sounds generated by a snoring individual have an effect on the cerebral electrical waves occurring during sleep (specifically deep restorative sleep)? (2) Would the snoring sounds of an individual being examined by PSG have more of an effect on any one of the EEG electrodes? METHODS PSG recordings were obtained from volunteers with primary snoring and those with obstructive sleep apnea syndrome (OSAS) on six different EEG channels (F4-M1, C4-M1, and O2-M1, F3-M2, C3-M2, and O1-M2). The relationship of each of these recordings and snoring sound signals was analyzed by using a computer-based electrophysiological signal analysis method. A three-tier approach was used in this relationship: "Feature extraction, Feature selection, and Classification". RESULTS Data were obtained from a total of 40 volunteers (32 men, mean age (± SD) 47.5 ± 3.2 years), 20 with primary snoring and 20 with OSAS. The discrete wavelet transform (DWT) feature extraction method was the most successful method, and by utilizing this method for analyzing EEG channels, snoring sound signals were found to affect the C3-M2 channel the most (Duncan test, p < 0.05). Delta wave frequency levels during snoring were decreased compared to both before snoring (p = 0.160) and after snoring (p = 0.04) periods (paired sample test). DISCUSSION When snoring sounds and EEG signals were analyzed for frequency, time, and wave conversion with feature extraction methods, the C3-M2 channel was to be found the most affected channel. The sleep physiologist who made the PSG analyses reported that, among the 6 EEG channels analyzed for periods where there was no apnea or hypopnea events but only snoring, C3-M2 was the channel showing changes in delta wave activity. CONCLUSION Our study showed that the monotonous and repetitive snoring sounds of the snorer do not wake the individual, but do affect deep restorative sleep (N3). PSG signal analysis revealed that the most significant changes were in the C3-M2 channel (N3 delta wave amplitude increase and frequency decrease during snoring). Thus, clinicians may be able to monitor the characteristic changes occuring in large cortical delta waves in snoring individuals with innovative single-channel EEG devices without microphones.
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Affiliation(s)
- Murat Kayabekir
- Department of Physiology, Medical School, Atatürk University, Erzurum, Turkey.
| | - Mete Yağanoğlu
- Department of Computer Engineering, Faculty of Engineering, Atatürk University, Erzurum, Turkey
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Zhang T, Han Z, Chen X, Chen W. Subbands and cumulative sum of subbands based nonlinear features enhance the performance of epileptic seizure detection. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102827] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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19
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Samal D, Dash PK, Bisoi R. Automatic identification of epileptic seizure signal using optimized added kernel support vector machine (OAKSVM). Neural Comput Appl 2021. [DOI: 10.1007/s00521-020-05675-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Peng H, Lei C, Zheng S, Zhao C, Wu C, Sun J, Hu B. Automatic epileptic seizure detection via Stein kernel-based sparse representation. Comput Biol Med 2021; 132:104338. [PMID: 33780870 DOI: 10.1016/j.compbiomed.2021.104338] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2020] [Revised: 02/20/2021] [Accepted: 03/10/2021] [Indexed: 12/29/2022]
Abstract
Epileptic seizure detection is of great significance in the diagnosis of epilepsy and relieving the heavy workload of visual inspection of electroencephalogram (EEG) recordings. This paper presents a novel method for seizure detection using the Stein kernel-based sparse representation (SR) for EEG recordings. Different from the traditional SR scheme that works with vector data in Euclidean space, the Stein kernel-based SR framework is constructed for seizure detection in the space of the symmetric positive definite (SPD) matrices, which form a Riemannian manifold. Due to the non-Euclidean geometry of the Riemannian manifold, the Stein kernel on the manifold permits the embedding of the manifold in a high-dimensional reproducing kernel Hilbert space (RKHS) to perform SR. In the Stein kernel-based SR framework, EEG samples are described by SPD matrices in the form of covariance descriptors (CovDs). Then, a test EEG sample is sparsely represented on the training set, and the test sample is classified as a member of the class, which leads to the minimum reconstructed residual. Finally, by using three widely used EEG datasets to evaluate the detection performance of the proposed method, the experimental results demonstrate that it achieves good classification accuracy on each dataset. Furthermore, the fast computational speed of the Stein kernel-based SR also meets the basic requirements for real-time seizure detection.
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Affiliation(s)
- Hong Peng
- Gansu Provincial Key Laboratory of Wearable Computing, School of Information Science and Engineering, Lanzhou University, Lanzhou, China.
| | - Chang Lei
- Gansu Provincial Key Laboratory of Wearable Computing, School of Information Science and Engineering, Lanzhou University, Lanzhou, China.
| | - Shuzhen Zheng
- Gansu Provincial Key Laboratory of Wearable Computing, School of Information Science and Engineering, Lanzhou University, Lanzhou, China.
| | - Chengjian Zhao
- Gansu Provincial Key Laboratory of Wearable Computing, School of Information Science and Engineering, Lanzhou University, Lanzhou, China.
| | - Chunyun Wu
- Gansu Provincial Key Laboratory of Wearable Computing, School of Information Science and Engineering, Lanzhou University, Lanzhou, China.
| | - Jieqiong Sun
- Gansu Provincial Key Laboratory of Wearable Computing, School of Information Science and Engineering, Lanzhou University, Lanzhou, China.
| | - Bin Hu
- Gansu Provincial Key Laboratory of Wearable Computing, School of Information Science and Engineering, Lanzhou University, Lanzhou, China; Joint Research Center for Cognitive Neurosensor Technology of Lanzhou University & Institute of Semiconductors, Chinese Academy of Sciences, Beijing, China; CAS Center for Excellence in Brain Science and Intelligence Technology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China; Engineering Research Center of Open Source Software and Real-Time System (Lanzhou University), Ministry of Education, Lanzhou, China.
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Usman SM, Khalid S, Bashir Z. Epileptic seizure prediction using scalp electroencephalogram signals. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2021.01.001] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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22
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23
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Analysis of epileptic EEG signals by using dynamic mode decomposition and spectrum. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2020.11.002] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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Singh N, Dehuri S. Multiclass classification of EEG signal for epilepsy detection using DWT based SVD and fuzzy kNN classifier. INTELLIGENT DECISION TECHNOLOGIES 2020. [DOI: 10.3233/idt-190043] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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25
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Khosla A, Khandnor P, Chand T. A comparative analysis of signal processing and classification methods for different applications based on EEG signals. Biocybern Biomed Eng 2020. [DOI: 10.1016/j.bbe.2020.02.002] [Citation(s) in RCA: 60] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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26
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George ST, Subathra M, Sairamya N, Susmitha L, Joel Premkumar M. Classification of epileptic EEG signals using PSO based artificial neural network and tunable-Q wavelet transform. Biocybern Biomed Eng 2020. [DOI: 10.1016/j.bbe.2020.02.001] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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Sharma R, Chopra K. EEG-based epileptic seizure detection using GPLV model and multi support vector machine. JOURNAL OF INFORMATION & OPTIMIZATION SCIENCES 2020. [DOI: 10.1080/02522667.2020.1715564] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Ruchi Sharma
- Departartment of Electrical and Electronics Engineering, GD Goenka University, Gurugram 122103, Haryana, India
| | - Khyati Chopra
- Departartment of Electrical and Electronics Engineering, GD Goenka University, Gurugram 122103, Haryana, India,
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Detecting Epileptic Seizures in EEG Signals with Complementary Ensemble Empirical Mode Decomposition and Extreme Gradient Boosting. ENTROPY 2020; 22:e22020140. [PMID: 33285915 DOI: 10.3390/e22020140] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2019] [Revised: 01/15/2020] [Accepted: 01/22/2020] [Indexed: 01/07/2023]
Abstract
Epilepsy is a common nervous system disease that is characterized by recurrent seizures. An electroencephalogram (EEG) records neural activity, and it is commonly used for the diagnosis of epilepsy. To achieve accurate detection of epileptic seizures, an automatic detection approach of epileptic seizures, integrating complementary ensemble empirical mode decomposition (CEEMD) and extreme gradient boosting (XGBoost), named CEEMD-XGBoost, is proposed. Firstly, the decomposition method, CEEMD, which is capable of effectively reducing the influence of mode mixing and end effects, was utilized to divide raw EEG signals into a set of intrinsic mode functions (IMFs) and residues. Secondly, the multi-domain features were extracted from raw signals and the decomposed components, and they were further selected according to the importance scores of the extracted features. Finally, XGBoost was applied to develop the epileptic seizure detection model. Experiments were conducted on two benchmark epilepsy EEG datasets, named the Bonn dataset and the CHB-MIT (Children's Hospital Boston and Massachusetts Institute of Technology) dataset, to evaluate the performance of our proposed CEEMD-XGBoost. The extensive experimental results indicated that, compared with some previous EEG classification models, CEEMD-XGBoost can significantly enhance the detection performance of epileptic seizures in terms of sensitivity, specificity, and accuracy.
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Comparison of empirical mode decomposition and coarse-grained procedure for detecting pre-ictal and ictal condition in electroencephalography signal. INFORMATICS IN MEDICINE UNLOCKED 2020. [DOI: 10.1016/j.imu.2020.100325] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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Wu D, Wang Z, Huang H, Wang G, Liu J, Cai C, Xu W. Epileptic Seizure Detection System Based on Multi-Domain Feature and Spike Feature of EEG. INT J HUM ROBOT 2019. [DOI: 10.1142/s0219843619500166] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Epilepsy is caused by sudden abnormal discharges of neurons in the brain. This paper constructs an automatic seizure detection system, which combines the predicting result of multi-domain feature with the predicting result of spike rate feature to detect the occurrence of epileptic seizures. After segmenting EEG data into 5[Formula: see text]s with 80% overlap epochs, the paper extracts time domain features, frequency domain features and hurst exponents (HE) from each epoch and these features are reduced by linear discriminant analysis (LDA) to be input parameters of the random forest (RF) classifier, which provides classification of the EEG epochs concerning the existence of seizures. In parallel, the paper extracts spikes from EEG data with morphological filter and calculates the spike rate to determine whether there is seizure. Then the results obtained by these two methods are merged as the final detection result. The paper shows that the accuracy (AC), sensitivity (SE), specificity (SP) and the false positive ratio based on event (FPRE) obtained by hybrid method are 98.94%, 76.60%, 98.99% and 2.43 times/h, respectively. Finally, the paper applies the seizure detection method to do seizure warning and recording to help the family member to take care of the patients and the doctor to adjust the antiepileptic drugs (AEDs).
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Affiliation(s)
- Duanpo Wu
- School of Communication Engineering, Hangzhou Dianzi University, Xiasha Higher Education Zone, Hangzhou 310018, P. R. China
- Zhejiang Provincial Key Laboratory of Information Processing, Communication and Networking, Zhejiang, Hangzhou 310027, P. R. China
- Department of Algorithm, Hangzhou Neuro Science and Technology Co., Ltd., Room 2601, Huaye Building, Hangzhou 310051, P. R. China
| | - Zimeng Wang
- School of Communication Engineering, Hangzhou Dianzi University, Xiasha Higher Education Zone, Hangzhou 310018, P. R. China
| | - Hong Huang
- Pharmacy Department, Huaxi Second Hospital, No. 20, Section 3, Renmin South Road, Jinjiang District, Chengdu 610041, P. R. China
| | - Guangsheng Wang
- Department of Neurology, Shuyang People’s Hospital, Xuzhou Medical University, No. 9 Yingbin Avenue, Yucheng Town, Xuzhou 223000, P. R. China
| | - Junbiao Liu
- Department of Algorithm, Hangzhou Neuro Science and Technology Co., Ltd., Room 2601, Huaye Building, Hangzhou 310051, P. R. China
| | - Chenyi Cai
- Department of Algorithm, Hangzhou Neuro Science and Technology Co., Ltd., Room 2601, Huaye Building, Hangzhou 310051, P. R. China
| | - Weifeng Xu
- Department of Algorithm, Hangzhou Neuro Science and Technology Co., Ltd., Room 2601, Huaye Building, Hangzhou 310051, P. R. China
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Automatic epileptic EEG detection using convolutional neural network with improvements in time-domain. Biomed Signal Process Control 2019. [DOI: 10.1016/j.bspc.2019.04.028] [Citation(s) in RCA: 57] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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33
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Electrochemical noise analysis to identify the corrosion type using the Stockwell transform and the Shannon energy. J Electroanal Chem (Lausanne) 2019. [DOI: 10.1016/j.jelechem.2019.01.020] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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34
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Zhang T, Chen W, Li M. Classification of inter-ictal and ictal EEGs using multi-basis MODWPT, dimensionality reduction algorithms and LS-SVM: A comparative study. Biomed Signal Process Control 2019. [DOI: 10.1016/j.bspc.2018.08.038] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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35
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Mamli S, Kalbkhani H. Gray-level co-occurrence matrix of Fourier synchro-squeezed transform for epileptic seizure detection. Biocybern Biomed Eng 2019. [DOI: 10.1016/j.bbe.2018.10.006] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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