Generalized Stockwell transform and SVD-based epileptic seizure detection in EEG using random forest

Dynamical graph neural network with attention mechanism for epilepsy detection using single channel EEG

Epilepsy is a chronic brain disease, and identifying seizures based on electroencephalogram (EEG) signals would be conducive to implement interventions to help patients reduce impairment and improve quality of life. In this paper, we propose a classification algorithm to apply dynamical graph neural network with attention mechanism to single channel EEG signals. Empirical mode decomposition (EMD) are adopted to construct graphs and the optimal adjacency matrix is obtained by model optimization. A multilayer dynamic graph neural network with attention mechanism is proposed to learn more discriminative graph features. The MLP-pooling structure is proposed to fuse graph features. We performed 12 classification tasks on the epileptic EEG database of the University of Bonn, and experimental results showed that using 25 runs of ten-fold cross-validation produced the best classification results with an average of 99.83[Formula: see text] accuracy, 99.91[Formula: see text] specificity, 99.78[Formula: see text] sensitivity, 99.87[Formula: see text] precision, and 99.47[Formula: see text] [Formula: see text] score for the 12 classification tasks.

Epileptic Seizure Prediction Using Attention Augmented Convolutional Network

Early seizure prediction is crucial for epilepsy patients to reduce accidental injuries and improve their quality of life. Identifying pre-ictal EEG from the inter-ictal state is particularly challenging due to their nonictal nature and remarkable similarities. In this study, a novel epileptic seizure prediction method is proposed based on multi-head attention (MHA) augmented convolutional neural network (CNN) to address the issue of CNN's limit of capturing global information of input signals. First, data enhancement is performed on original EEG recordings to balance the pre-ictal and inter-ictal EEG data, and the EEG recordings are sliced into 6-second-long EEG segments. Subsequently, EEG time-frequency distribution is obtained using Stockwell transform (ST), and the attention augmented convolutional network is employed for feature extraction and classification. Finally, post-processing is utilized to reduce the false prediction rate (FPR). The CHB-MIT EEG database was used to evaluate the system. The validation results showed a segment-based sensitivity of 98.24% and an event-based sensitivity of 94.78% with a FPR of 0.05/h were yielded, respectively. The satisfying results of the proposed method demonstrate its possible potential for clinical applications.

Overview of methods and available tools used in complex brain disorders

Complex brain disorders, including Alzheimer's dementia, sleep disorders, and epilepsy, are chronic conditions that have high prevalence individually and in combination, increasing mortality risk, and contributing to the socioeconomic burden of patients, their families and, their communities at large. Although some literature reviews have been conducted mentioning the available methods and tools used for supporting the diagnosis of complex brain disorders and processing different files, there are still limitations. Specifically, these research works have focused primarily on one single brain disorder, i.e., sleep disorders or dementia or epilepsy. Additionally, existing research initiatives mentioning some tools, focus mainly on one single type of data, i.e., electroencephalography (EEG) signals or actigraphies or Magnetic Resonance Imaging, and so on. To tackle the aforementioned limitations, this is the first study conducting a comprehensive literature review of the available methods used for supporting the diagnosis of multiple complex brain disorders, i.e., Alzheimer's dementia, sleep disorders, epilepsy. Also, to the best of our knowledge, we present the first study conducting a comprehensive literature review of all the available tools, which can be exploited for processing multiple types of data, including EEG, actigraphies, and MRIs, and receiving valuable forms of information which can be used for differentiating people in a healthy control group and patients suffering from complex brain disorders. Additionally, the present study highlights both the benefits and limitations of the existing available tools.

An overview of machine learning methods in enabling IoMT-based epileptic seizure detection

The healthcare industry is rapidly automating, in large part because of the Internet of Things (IoT). The sector of the IoT devoted to medical research is sometimes called the Internet of Medical Things (IoMT). Data collecting and processing are the fundamental components of all IoMT applications. Machine learning (ML) algorithms must be included into IoMT immediately due to the vast quantity of data involved in healthcare and the value that precise forecasts have. In today's world, together, IoMT, cloud services, and ML techniques have become effective tools for solving many problems in the healthcare sector, such as epileptic seizure monitoring and detection. One of the biggest hazards to people's lives is epilepsy, a lethal neurological condition that has become a global issue. To prevent the deaths of thousands of epileptic patients each year, there is a critical necessity for an effective method for detecting epileptic seizures at their earliest stage. Numerous medical procedures, including epileptic monitoring, diagnosis, and other procedures, may be carried out remotely with the use of IoMT, which will reduce healthcare expenses and improve services. This article seeks to act as both a collection and a review of the different cutting-edge ML applications for epilepsy detection that are presently being combined with IoMT.

Epileptic Seizure Detection Using Machine Learning: Taxonomy, Opportunities, and Challenges

Epilepsy is a life-threatening neurological brain disorder that gives rise to recurrent unprovoked seizures. It occurs due to abnormal chemical changes in our brains. For many years, studies have been conducted to support the automatic diagnosis of epileptic seizures for clinicians’ ease. For that, several studies entail machine learning methods for early predicting epileptic seizures. Mainly, feature extraction methods have been used to extract the right features from the EEG data generated by the EEG machine. Then various machine learning classifiers are used for the classification process. This study provides a systematic literature review of the feature selection process and classification performance. This review was limited to finding the most used feature extraction methods and the classifiers used for accurate classification of normal to epileptic seizures. The existing literature was examined from well-known repositories such as MDPI, IEEE Xplore, Wiley, Elsevier, ACM, Springer link, and others. Furthermore, a taxonomy was created that recapitulates the state-of-the-art used solutions for this problem. We also studied the nature of different benchmark and unbiased datasets and gave a rigorous analysis of the working of classifiers. Finally, we concluded the research by presenting the gaps, challenges, and opportunities that can further help researchers predict epileptic seizures.

Supervised Machine Learning and Deep Learning Techniques for Epileptic Seizure Recognition Using EEG Signals-A Systematic Literature Review

Electroencephalography (EEG) is a complicated, non-stationary signal that requires extensive preprocessing and feature extraction approaches to be accurately analyzed. In recent times, Deep learning (DL) has shown great promise in exploiting the characteristics of EEG signals as it can learn relevant features from raw data autonomously. Although studies involving DL have become more common in the last two years, the topic of whether DL truly delivers advantages over conventional Machine learning (ML) methodologies remains unsettled. This study aims to present a detailed overview of the main challenges in the field of seizure detection, prediction, and classification utilizing EEG data, and the approaches taken to solve them using ML and DL methods. A systematic review was conducted surveying peer-reviewed publications published between 2017 and 16 July 2022 using two scientific databases (Web of Science and Scopus) totaling 6822 references after discarding duplicate publications. Whereas 2262 articles were screened based on the title, abstract, and keywords, only 214 were eligible for full-text assessment. A total of 91 papers have been included in this survey after meeting the eligible inclusion and exclusion criteria. The most significant findings from the review are summarized, and several important concepts involving ML and DL for seizure detection, prediction, and classification are discussed in further depth. This review aims to learn more about the different approaches for identifying different types and stages of epileptic seizures, which may then be employed to enhance the lives of epileptic patients in the future, as well as aid experts in the field.

Classification of EEG Signals for Prediction of Epileptic Seizures

Epilepsy is a common brain disorder that causes patients to face multiple seizures in a single day. Around 65 million people are affected by epilepsy worldwide. Patients with focal epilepsy can be treated with surgery, whereas generalized epileptic seizures can be managed with medications. It has been noted that in more than 30% of cases, these medications fail to control epileptic seizures, resulting in accidents and limiting the patient’s life. Predicting epileptic seizures in such patients prior to the commencement of an oncoming seizure is critical so that the seizure can be treated with preventive medicines before it occurs. Electroencephalogram (EEG) signals of patients recorded to observe brain electrical activity during a seizure can be quite helpful in predicting seizures. Researchers have proposed methods that use machine and/or deep learning techniques to predict epileptic seizures using scalp EEG signals; however, prediction of seizures with increased accuracy is still a challenge. Therefore, we propose a three-step approach. It includes preprocessing of scalp EEG signals with PREP pipeline, which is a more sophisticated alternative to basic notch filtering. This method uses a regression-based technique to further enhance the SNR, with a combination of handcrafted, i.e., statistical features such as temporal mean, variance, and skewness, and automated features using CNN, followed by classification of interictal state and preictal state segments using LSTM to predict seizures. We train and validate our proposed technique on the CHB-MIT scalp EEG dataset and achieve accuracy of 94%, sensitivity of 93.8%, and 91.2% specificity. The proposed technique achieves better sensitivity and specificity than existing methods.

Enhanced Feature Extraction-based CNN Approach for Epileptic Seizure Detection from EEG Signals

One of the most common neurological disorders is epilepsy, which disturbs the nerve cell activity in the brain, causing seizures. Electroencephalography (EEG) signals are used to detect epilepsy and are considered standard techniques to diagnose epilepsy conditions. EEG monitors and records the brain activity of epilepsy patients, and these recordings are used in the diagnosis of epilepsy. However, extracting the information from the EEG recordings manually for detecting epileptic seizures is a difficult cumbersome, error-prone, and labor-intensive task. These negative attributes of the manual process increase the demand for implementing an automated model for the seizure detection process, which can classify seizure and nonseizures from EEG signals to help in the timely identification of epilepsy. Recently, deep learning (DL) and machine learning (ML) techniques have been used in the automatic detection of epileptic seizures because of their superior classification abilities. ML and DL algorithms can accurately classify different seizure conditions from large-scale EEG data and provide appropriate results for neurologists. This work presents a feature extraction-based convolutional neural network (CNN) to sense and classify different types of epileptic seizures from EEG signals. Different features are analyzed to classify seizures via EEG signals. Simulation analysis was managed to investigate the classification performance of the hybrid CNN-RNN model in terms of different achievement metrics such as accuracy, precision, recall, f1 score, and false-positive rate. The results validate the efficacy of the CNN-RNN model for seizure detection.

Automatic Diagnosis of Epileptic Seizures in EEG Signals Using Fractal Dimension Features and Convolutional Autoencoder Method

This paper proposes a new method for epileptic seizure detection in electroencephalography (EEG) signals using nonlinear features based on fractal dimension (FD) and a deep learning (DL) model. Firstly, Bonn and Freiburg datasets were used to perform experiments. The Bonn dataset consists of binary and multi-class classification problems, and the Freiburg dataset consists of two-class EEG classification problems. In the preprocessing step, all datasets were prepossessed using a Butterworth band pass filter with 0.5–60 Hz cut-off frequency. Then, the EEG signals of the datasets were segmented into different time windows. In this section, dual-tree complex wavelet transform (DT-CWT) was used to decompose the EEG signals into the different sub-bands. In the following section, in order to feature extraction, various FD techniques were used, including Higuchi (HFD), Katz (KFD), Petrosian (PFD), Hurst exponent (HE), detrended fluctuation analysis (DFA), Sevcik, box counting (BC), multiresolution box-counting (MBC), Margaos-Sun (MSFD), multifractal DFA (MF-DFA), and recurrence quantification analysis (RQA). In the next step, the minimum redundancy maximum relevance (mRMR) technique was used for feature selection. Finally, the k-nearest neighbors (KNN), support vector machine (SVM), and convolutional autoencoder (CNN-AE) were used for the classification step. In the classification step, the K-fold cross-validation with k = 10 was employed to demonstrate the effectiveness of the classifier methods. The experiment results show that the proposed CNN-AE method achieved an accuracy of 99.736% and 99.176% for the Bonn and Freiburg datasets, respectively.

Detection of preictal state in epileptic seizures using ensemble classifier

OBJECTIVE

Epilepsy affected patient experiences more than one frequency seizures which can not be treated with medication or surgical procedures in 30% of the cases. Therefore, an early prediction of these seizures is inevitable for these cases to control them with therapeutic interventions.

METHODS

In recent years, researchers have proposed multiple deep learning based methods for detection of preictal state in electroencephalogram (EEG) signals, however, accurate detection of start of preictal state remains a challenge. We propose a novel ensemble classifier based method that gets the comprehensive feature set as input and combines three different classifiers to detect the preictal state.

RESULTS

We have applied the proposed method on the publicly available scalp EEG dataset CHBMIT of 22 subjects. An average accuracy of 94.31% with sensitivity and specificity of 94.73% and 93.72% respectively has been achieved with the method proposed in this study.

CONCLUSIONS

Proposed study utilizes the preprocessing techniques for noise removal, combines deep learning based and handcrafted features and an ensemble classifier for detection of start of preictal state. Proposed method gives better results in terms of accuracy, sensitivity, and specificity.

Epileptic Seizures Detection in EEG Signals Using Fusion Handcrafted and Deep Learning Features

Epilepsy is a brain disorder disease that affects people's quality of life. Electroencephalography (EEG) signals are used to diagnose epileptic seizures. This paper provides a computer-aided diagnosis system (CADS) for the automatic diagnosis of epileptic seizures in EEG signals. The proposed method consists of three steps, including preprocessing, feature extraction, and classification. In order to perform the simulations, the Bonn and Freiburg datasets are used. Firstly, we used a band-pass filter with 0.5-40 Hz cut-off frequency for removal artifacts of the EEG datasets. Tunable-Q Wavelet Transform (TQWT) is used for EEG signal decomposition. In the second step, various linear and nonlinear features are extracted from TQWT sub-bands. In this step, various statistical, frequency, and nonlinear features are extracted from the sub-bands. The nonlinear features used are based on fractal dimensions (FDs) and entropy theories. In the classification step, different approaches based on conventional machine learning (ML) and deep learning (DL) are discussed. In this step, a CNN-RNN-based DL method with the number of layers proposed is applied. The extracted features have been fed to the input of the proposed CNN-RNN model, and satisfactory results have been reported. In the classification step, the K-fold cross-validation with k = 10 is employed to demonstrate the effectiveness of the proposed CNN-RNN classification procedure. The results revealed that the proposed CNN-RNN method for Bonn and Freiburg datasets achieved an accuracy of 99.71% and 99.13%, respectively.

An Overview of EEG-based Machine Learning Methods in Seizure Prediction and Opportunities for Neurologists in this Field

The unpredictability of epileptic seizures is one of the most problematic aspects of the field of epilepsy. Methods or devices capable of detecting seizures minutes before they occur may help prevent injury or even death and significantly improve the quality of life. Machine learning (ML) is an emerging technology that can markedly enhance algorithm performance by interpreting data. ML has gained increasing attention from medical researchers in recent years. Its epilepsy applications range from the localization of the epileptic region, predicting the medical or surgical outcome of epilepsy, and automated electroencephalography (EEG) analysis to seizure prediction. While ML has good prospects with regard to detecting epileptic seizures via EEG signals, many clinicians are still unfamiliar with this field. This work briefly summarizes the history and recent significant progress made in this field and clarifies the essential components of the automatic seizure detection system using ML methodologies for clinicians. This review also proposes how neurologists can actively contribute to ensure improvements in seizure prediction using EEG-based ML.

The relationship between snoring sounds and EEG signals on polysomnography

PURPOSE

The aim of this study was to analyze the relationship of snoring sound signals obtained by polysomnography (PSG) in the sleep laboratory with cortical EEG (6 channel) signals to find answers to two important questions that have been covered to a limited extent in the literature: (1) Would the sounds generated by a snoring individual have an effect on the cerebral electrical waves occurring during sleep (specifically deep restorative sleep)? (2) Would the snoring sounds of an individual being examined by PSG have more of an effect on any one of the EEG electrodes?

METHODS

PSG recordings were obtained from volunteers with primary snoring and those with obstructive sleep apnea syndrome (OSAS) on six different EEG channels (F4-M1, C4-M1, and O2-M1, F3-M2, C3-M2, and O1-M2). The relationship of each of these recordings and snoring sound signals was analyzed by using a computer-based electrophysiological signal analysis method. A three-tier approach was used in this relationship: "Feature extraction, Feature selection, and Classification".

RESULTS

Data were obtained from a total of 40 volunteers (32 men, mean age (± SD) 47.5 ± 3.2 years), 20 with primary snoring and 20 with OSAS. The discrete wavelet transform (DWT) feature extraction method was the most successful method, and by utilizing this method for analyzing EEG channels, snoring sound signals were found to affect the C3-M2 channel the most (Duncan test, p < 0.05). Delta wave frequency levels during snoring were decreased compared to both before snoring (p = 0.160) and after snoring (p = 0.04) periods (paired sample test).

DISCUSSION

When snoring sounds and EEG signals were analyzed for frequency, time, and wave conversion with feature extraction methods, the C3-M2 channel was to be found the most affected channel. The sleep physiologist who made the PSG analyses reported that, among the 6 EEG channels analyzed for periods where there was no apnea or hypopnea events but only snoring, C3-M2 was the channel showing changes in delta wave activity.

CONCLUSION

Our study showed that the monotonous and repetitive snoring sounds of the snorer do not wake the individual, but do affect deep restorative sleep (N3). PSG signal analysis revealed that the most significant changes were in the C3-M2 channel (N3 delta wave amplitude increase and frequency decrease during snoring). Thus, clinicians may be able to monitor the characteristic changes occuring in large cortical delta waves in snoring individuals with innovative single-channel EEG devices without microphones.

Automatic epileptic seizure detection via Stein kernel-based sparse representation

Epileptic seizure detection is of great significance in the diagnosis of epilepsy and relieving the heavy workload of visual inspection of electroencephalogram (EEG) recordings. This paper presents a novel method for seizure detection using the Stein kernel-based sparse representation (SR) for EEG recordings. Different from the traditional SR scheme that works with vector data in Euclidean space, the Stein kernel-based SR framework is constructed for seizure detection in the space of the symmetric positive definite (SPD) matrices, which form a Riemannian manifold. Due to the non-Euclidean geometry of the Riemannian manifold, the Stein kernel on the manifold permits the embedding of the manifold in a high-dimensional reproducing kernel Hilbert space (RKHS) to perform SR. In the Stein kernel-based SR framework, EEG samples are described by SPD matrices in the form of covariance descriptors (CovDs). Then, a test EEG sample is sparsely represented on the training set, and the test sample is classified as a member of the class, which leads to the minimum reconstructed residual. Finally, by using three widely used EEG datasets to evaluate the detection performance of the proposed method, the experimental results demonstrate that it achieves good classification accuracy on each dataset. Furthermore, the fast computational speed of the Stein kernel-based SR also meets the basic requirements for real-time seizure detection.

Detecting Epileptic Seizures in EEG Signals with Complementary Ensemble Empirical Mode Decomposition and Extreme Gradient Boosting

Epilepsy is a common nervous system disease that is characterized by recurrent seizures. An electroencephalogram (EEG) records neural activity, and it is commonly used for the diagnosis of epilepsy. To achieve accurate detection of epileptic seizures, an automatic detection approach of epileptic seizures, integrating complementary ensemble empirical mode decomposition (CEEMD) and extreme gradient boosting (XGBoost), named CEEMD-XGBoost, is proposed. Firstly, the decomposition method, CEEMD, which is capable of effectively reducing the influence of mode mixing and end effects, was utilized to divide raw EEG signals into a set of intrinsic mode functions (IMFs) and residues. Secondly, the multi-domain features were extracted from raw signals and the decomposed components, and they were further selected according to the importance scores of the extracted features. Finally, XGBoost was applied to develop the epileptic seizure detection model. Experiments were conducted on two benchmark epilepsy EEG datasets, named the Bonn dataset and the CHB-MIT (Children's Hospital Boston and Massachusetts Institute of Technology) dataset, to evaluate the performance of our proposed CEEMD-XGBoost. The extensive experimental results indicated that, compared with some previous EEG classification models, CEEMD-XGBoost can significantly enhance the detection performance of epileptic seizures in terms of sensitivity, specificity, and accuracy.

Epileptic Seizure Detection System Based on Multi-Domain Feature and Spike Feature of EEG

Epilepsy is caused by sudden abnormal discharges of neurons in the brain. This paper constructs an automatic seizure detection system, which combines the predicting result of multi-domain feature with the predicting result of spike rate feature to detect the occurrence of epileptic seizures. After segmenting EEG data into 5[Formula: see text]s with 80% overlap epochs, the paper extracts time domain features, frequency domain features and hurst exponents (HE) from each epoch and these features are reduced by linear discriminant analysis (LDA) to be input parameters of the random forest (RF) classifier, which provides classification of the EEG epochs concerning the existence of seizures. In parallel, the paper extracts spikes from EEG data with morphological filter and calculates the spike rate to determine whether there is seizure. Then the results obtained by these two methods are merged as the final detection result. The paper shows that the accuracy (AC), sensitivity (SE), specificity (SP) and the false positive ratio based on event (FPRE) obtained by hybrid method are 98.94%, 76.60%, 98.99% and 2.43 times/h, respectively. Finally, the paper applies the seizure detection method to do seizure warning and recording to help the family member to take care of the patients and the doctor to adjust the antiepileptic drugs (AEDs).