4-Chlorophenol biodegradation facilitator composed of recombinant multi-biocatalysts immobilized onto montmorillonite

Degradation and metagenomic analysis of 4-chlorophenol utilizing multiple metal tolerant bacterial consortium

Chlorophenols are persistent environmental pollutants used in synthesizing dyes, drugs, pesticides, and other industrial products. The chlorophenols released from these processes seriously threaten the environment and human health. The present study describes 4-chlorophenol (4-CP) degradation activity and metagenome structure of a bacterial consortium enriched in a 4-CP-containing medium. The consortium utilized 4-CP as a single carbon source at a wide pH range, temperature, and in the presence of heavy metals. The immobilized consortium retained its degradation capacity for an extended period. The 4-aminoantipyrine colorimetric analysis revealed complete mineralization of 4-CP up to 200 mg/L concentration and followed the zero-order kinetics. The addition of glycerol and yeast extract enhanced the degradation efficiency. The consortium showed both ortho- and meta-cleavage activity of catechol dioxygenase. Whole genome sequence (WGS) analysis revealed the microbial compositions and functional genes related to xenobiotic degradation pathways. The identified genes were mapped on the KEGG database to construct the 4-CP degradation pathway. The results exhibited the high potential of the consortium for bioremediation of 4-CP contaminated sites. To our knowledge, this is the first report on WGS analysis of a 4-CP degrading bacterial consortium.

Evaluation of scale-up effect on cold-active enzyme production and biodegradation tests using pilot-scale bioreactors and a 3D soil tank

Despite recent attention being paid to the biodegradation of petroleum hydrocarbons in cold environments, scale-up studies of biodegradation are lacking. Herein, the effect of scale-up on the enzymatic biodegradation of highly contaminated soil at low temperatures was studied. A novel cold-adapted bacteria (Arthrobacter sp. S2TR-06) was isolated that could produce cold-active degradative enzymes (xylene monooxygenase (XMO) and catechol 2,3-dioxygenase (C2,3D)). Enzyme production was investigated on 4 different scales (lab to pilot scale). The results showed a shorter fermentation time, and the highest production of enzymes and biomass (107 g/L for biomass, 109 U/mL, and 203 U/mL for XMO and C2,3D after 24 h) was achieved in the 150-L bioreactor due to enhanced oxygenation. Multi-pulse injection of p-xylene into the production medium was needed every 6 h. The stability of membrane-bound enzymes can be increased up to 3-fold by adding FeSO₄ at 0.1% (w/v) before extraction. Soil tests also showed that biodegradation is scale-dependent. The maximum biodegradation rate decreased from 100% at lab-scale to 36% in the 300-L sand tank tests due to limited access of enzymes to trapped p-xylene in soil pores, low dissolved oxygen in the water-saturated zone, soil heterogeneity, and the presence of the free phase of p-xylene. The result demonstrated that formulation of enzyme mixture with FeSO₄ and direct injection of enzyme mixture (third scenario) can increase the efficiency of bioremediation in heterogeneous soil. In this study, it was demonstrated that cold-active degradative enzyme production can be scaled up to an industrial scale and enzymatic treatment can be used to effectively bioremediate p-xylene contaminated sites. This study could provide key scale-up guidance for the enzymatic bioremediation of mono-aromatic pollutants in water-saturated soil under cold conditions.

Kinetic Study of 4-Chlorophenol Biodegradation by Acclimated Sludge in a Packed Bed Reactor

In this study, batch experiments were conducted to evaluate the degradation of 4-CP using acclimated sludge. The Monod and Haldane models were employed to fit the specific growth rate with various initial 4-CP concentrations of 67–412 mg/L in the batch experiments. Haldane kinetics showed a better fit to experimental results than Monod kinetics. The kinetic parameters were obtained from a comparison of Monod and Haldane kinetics with batch experimental data. The values of μm and KS were found to be 0.691 d−1 and 5.62 mg/L, respectively, for Monod kinetics. In contrast, the values of μm, KS, and KI were 1.30 d−1, 8.38 mg/L, and 279.4 mg/L, respectively, for Haldane kinetics. The kinetic parameters in Haldane kinetics were used as input parameters for the kinetic model system of the packed bed reactor (PBR). The continuous flow PBR was conducted to validate the kinetic model system. The model-simulated results agreed well with experimental data in the PBR performance operation. At the steady-state stage, the removal efficiency of 4-CP was 70.8–96.1%, while the hydraulic retention time (HRT) was 2.5 to 12.4 h. The corresponding removal of 4-CP was assessed to be 94.6 and 96.1% when the inlet 4-CP loading rate was increased from 0.11 to 0.51 kg/m3-d. The approaches of kinetic models and experiments presented in this study can be applied to design a PBR for 4-CP treatment in wastewater from the effluents of various industries.

Enzymatic biodegradation of highly p-xylene contaminated soil using cold-active enzymes: A soil column study

Enzymatic bioremediation is a sustainable and environment-friendly method for the clean-up of contaminated soil and water. In the present study, enzymatic bioremediation was designed using cold-active enzymes (psychrozymes) which catalyze oxidation steps of p-xylene biodegradation in highly contaminated soil (initial concentration of 13,000 mg/kg). The enzymes were obtained via co-culture of two psychrophilic Pseudomonas strains and characterized by kinetic studies and tandem LC-MS/MS. To mimic in situ application of enzyme mixture, bioremediation of p-xylene contaminated soil was carried out in soil column (140 mL) tests with the injection (3 pore volume) of different concentrations of enzyme cocktails (X, X/5, and X/10). Enzyme cocktail in X concentration contained about 10 U/mL of xylene monooxygenase (XMO) and 20 U/mL of catechol 2, 3 dioxygenases (C2,3D). X/5 and X/10 correspond to 5x and 10x dilution of enzyme cocktail respectively. The results showed that around 92-94% p-xylene removal was achieved in the treated soil column with enzyme concentration X, X/5 after second enzyme injection. While the p-xylene removal rate obtained by X/10 concentration of enzyme was less than 30% and near to untreated soil column (22.2%). The analysis of microbial diversity and biotoxicity assay (root elongation and seed germination) confirmed the advantage of using enzymes as a green and environmentally friendly approach for decontamination of pollutants with minimal or even positive effects on microbial community and also enrichment of soil after treatment.

Characterization of Gentisate 1,2-Dioxygenase from Pseudarthrobacter phenanthrenivorans Sphe3 and Its Stabilization by Immobilization on Nickel-Functionalized Magnetic Nanoparticles

The aim of this study was the biochemical and kinetic characterization of the gentisate 1,2-dioxygenase (GDO) from Pseudarthrobacter phenanthrenivorans Sphe3 and the development of a nanobiocatalyst by its immobilization on Ni2+-functionalized Fe3O4-polydopamine magnetic nanoparticles (Ni2+-PDA-MNPs). This is the first GDO to be immobilized. The gene encoding the GDO was cloned with an N-terminal His-tag and overexpressed in E. coli. The nanoparticles showed a high purification efficiency of GDO from crude cell lysates with a maximum activity recovery of 97%. The immobilized enzyme was characterized by Fourier transform infrared spectroscopy (FTIR). The reaction product was identified by 1H NMR. Both free and immobilized GDO exhibited Michaelis–Menten kinetics with Km values of 25.9 ± 4.4 and 82.5 ± 14.2 μM and Vmax values of 1.2 ± 0.1 and 0.03 ± 0.002 mM*s−1, respectively. The thermal stability of the immobilized GDO was enhanced at 30 °C, 40 °C, and 50 °C, compared to the free GDO. Stored at −20 °C, immobilized GDO retained more than 60% of its initial activity after 30 d, while the free enzyme completely lost its activity after 10 d. Furthermore, the immobilized nanoparticle–enzyme conjugate retained more than 50% enzyme activity up to the fifth cycle.

Sustainable production and co-immobilization of cold-active enzymes from Pseudomonas sp. for BTEX biodegradation

Toluene/o-Xylene Monooxygenase (ToMO) is equipped with a broad spectrum of aromatic substrate specificity (such as BTEX; benzene, toluene, ethylbenzene, and isomers of xylenes). TOMO has can hydroxylate more than a single position of aromatic rings in two consecutive monooxygenation reactions. Catechol 1,2-dioxygenase (C1,2D) is an iron-containing enzyme able to cleave the ring of catechol (the converted product from ToMO) for complete detoxification of BTEX. In this study, cold-active ToMO and C1,2D were produced using newly isolated psychrophilic Pseudomonas S2TR-14 in the minimal salt medium supplemented with crustacean waste and different concentrations of used motor oil (0.2-2% (v/v)). Crude ToMO and C1,2D were immobilized into micro/nano biochar-chitosan matrices and used for BTEX biodegradation. The results showed that the highest enzyme production (12 U/mg for ToMO and 22 U/mg for C1,2D) was achieved at the presence of 0.5% v/v used motor oil compared to the control group without motor oil (0.07 and 0.06 U/mg). High immobilization yield was achieved due to covalent bonding of ToMO (92.26% for micro matrix and 77.20% for nano matrix) and C1,2D (87.57% for micro matrix and 74.79% for nano matrix) with matrices. FTIR spectra confirmed the immobilization of enzymes on the surface of microbiochar and nanobiochar-chitosan matrices as proper support. The immobilization increased the storage stability of the enzymes with more than 50% residual activity after 30 days at 4 ± 1 °C, while the free form of enzymes had less than 10% of its activity. Immobilized enzymes degraded more than 80% of BTEX (~200 mg/L in groundwater and ~10,000 mg/kg in soil) at 10 ± 1 °C in groundwater and soil. Therefore, integrated use of microbiochar and nanobiochar with chitosan for co-immobilization of ToMO and C1,2D can be a potential way to remove petroleum hydrocarbons with higher efficiency from contaminated groundwater and soil.

Effect of current density and pH on the electrochemically generated active chloro species for the rapid mineralization of p-substituted phenol

The aim of present study is increasing the degradation and mineralization of 4-chlorophenol (4-CP) during electrochemical oxidation with Ti/RuO₂ anodes. Innovatively, the evolution of chlorine-related species and the formations of various inorganic ions were investigated by electrolytic analysis in order to set up whether the formation and consumption of these byproducts associated with either chemical or electrochemical reactions. The effect of operating parameters such as current density, solution pH, treatment time, and electrolyte concentration has been studied. The formation of Cl₂, chlorite (ClO₂^-), and chlorate (ClO₃^-) were detected by adding the known concentration of Cl^- ions at different pH and current densities. Concentration trends of active chloro-species indicate that the degradation of 4-CP and chemical oxygen demand (COD) removal was formed maximum at pH 6 and j of 225.2 Am^-2 in presence of 0.0085 M NaCl. Thus, the 4-CP degradation mainly depends on the radicals and active chlorine formation and a mineralization mechanism was proposed based on intermediates byproducts formation such as catechol, hydroquinone, 1, 4-benzoquinone, and organic acids identify by using the GC-MS and HPLC analysis at the optimum treatment condition. Total organic carbon (TOC) at different pH and current density, mass balance analysis of carbon and inorganic species formation were determined at the optimum treatment conditions of 4-CP. The degradation kinetic of 4-CP was followed the pseudo-first order kinetic model during the each parameters optimization. Specific energy consumption and current efficiency were also used to identify the technical feasibility of the process.

Psychrozymes as novel tools to biodegrade p-xylene and potential use for contaminated groundwater in the cold climate

Sites contaminated by petroleum hydrocarbons in cold-climate regions have recently received significant attention due to their sensitive ecosystem and human health impacts. Two cold-adapted pseudomonas strains were isolated from contaminated groundwater and soil. As xylene monooxygenase from Pseudomonas synxantha S2TR-26 and catechol 2,3-dioxygenase from Pseudomonas mandelii S2TR-08, have a matching end product, they acted in symphony to degrade p-xylene. Their unique thermodynamic and kinetic behavior permits them to achieve rapid degradation of p-xylene at low temperatures (<15 °C). The results showed that the sequential action led to the conversion of 200 mg/l of p-xylene within 72 h and complete degradation after 120 h. The cocktail of these enzymes with a ratio of 1:1.5 (xylene monooxygenase: catechol 2, 3-dioxygenase) confirmed the complete degradation of p-xylene within 48 h at 15 °C. This approach will allow efficient biodegradation of p-xylene to minimize the bioremediation duration in cold-climate regions.

Development of biocatalysts immobilized on coal ash-derived Ni-zeolite for facilitating 4-chlorophenol degradation

A new type of biocatalyst was developed to facilitate the biochemical decomposition of 4-chlorophenol (4-CP) in this study. Oxydoreductases that catalyze the initial steps of 4-CP biodegradation were immobilized on a synthetic inorganic enzyme support. Type-X zeolite, a high-surface area support, was synthesized from coal fly ash, on which nickel ions were plated by impregnation (Ni-zeolite), followed by the effective immobilization (77.5% immobilization yield) of recombinant monooxygenase (CphC-I), dioxygenase (CphA-I), and flavin reductase (Fre) isolated from Pseudarthrobacter chlorophenolicus A6 and Escherichia coli K-12, respectively. The retained catalytic activity of the enzymes immobilized on Ni-zeolite was as high as 64% of the value for the corresponding free enzymes. The Michaelis-Menten kinetic parameters v_max and K_M of the immobilized enzymes were determined to be 0.20 mM·min^-1 and 0.44 mM, respectively. These results are expected to provide useful information with respect to the development of novel enzymatic treatments for phenolic hydrocarbon contaminants.

Ultrafine SnO2/010 Facet-Exposed BiVO4 Nanocomposites as Efficient Photoanodes for Controllable Conversion of 2,4-Dichlorophenol via a Preferential Dechlorination Path

It is a great challenge for achieving efficiently controllable conversion of chlorinated organics through BiVO₄-based photoelectrochemical methods by improving the selective adsorption of such organics and charge separation. Herein, we have successfully fabricated SnO₂/010 facet-exposed BiVO₄ nanocomposites by a series of hydrothermal processes and further used as efficient photoanodes. The resulting photoanode exhibits about 6.3 times higher photoelectrochemical activity than bulk-BiVO₄, especially with the efficiently controllable conversion of 2,4-dichlorophenol (2,4-DCP) to the nontoxic valuable intermediates such as catechol and pyrogallol by preferential dechlorination. Based on the 2,4-DCP adsorption curves, in situ diffuse reflectance infrared spectra, transient-state surface photovoltage responses, and photocurrent action spectra, it was clearly confirmed that the exceptional performance could be mainly attributed to the promoted selective adsorption of 2,4-DCP for efficiently modulating holes by the strong coordination interactions between -Cl with lone-pair electrons in 2,4-DCP and Bi- with empty orbits on (010) facet-exposed BiVO₄ nanoflakes and to the coupled nano-SnO₂ for prolonging the charge lifetime of BiVO₄ by acting as the high-energy-level electron-accepting platform. This work provides a feasible strategy to develop excellent BiVO₄-based photoelectrochemical methods for efficiently controlling the conversion of chlorinated organics simultaneously with energy production and recovery.

Bio-photoelectrochemcial system constructed with BiVO4/RGO photocathode for 2,4-dichlorophenol degradation: BiVO4/RGO optimization, degradation performance and mechanism

A single-chamber bio-photoelectrochemical system (BPES) constructed with BiVO₄/reduced graphene oxide (RGO) photocathode was proposed for 2,4-dichlorophenol (2,4-DCP) degradation under simulated solar irradiation. The BiVO₄/RGO (B/G) composites were synthesized, optimized and characterized by various techniques to analyze their physico-chemical and photocatalytic properties. Results showed that B/G (5 wt% - 9 h - 150 °C) exhibited the best photocatalytic activity for 2,4-DCP degradation, which was 1.5 times of that of BiVO₄, due to its better light absorption, faster electrons transfer, and more efficient photo-generated e^- - h⁺ separation. Reactive species trapping experiments revealed that ·OH was the main radical leading to 2,4-DCP degradation, and h⁺ also influenced 2,4-DCP removal. The 2,4-DCP (20 mg/L) removal rate and current output from the illuminated BPES were much higher than those of the unilluminated reactor (68.5 % vs. 41.8 %, 60.31 A/m³ vs. 40.07 A/m³) in 24 h, and the cathode potential was more negative, indicating that photocathode catalytic process was favorable to pollutants degradation and energy generation. Intermediates of 2,4-DCP degradation in the BPES were identified, and accordingly, possible degradation pathway and mechanism were proposed. This research advanced the development of efficient photocathode and mechanism of recalcitrant wastewater treatment in the BPES.