Single and combined inhibition of Methanosaeta concilii by ammonia, sodium ion and hydrogen sulfide

Chemical characterization and anaerobic treatment of bitumen fume condensate using a membrane bioreactor

Bitumen fume condensate (BFC) is a hazardous wastewater generated at asphalt reclamation and production sites. BFC contains a wide variety of potentially toxic organic pollutants that negatively affect anaerobic processes. In this study, we chemically characterized BFC produced at an industrial site and evaluated its degradation under anaerobic conditions. Analyses identified about 900 compounds including acetate, polycyclic aromatic hydrocarbons, phenolic compounds, and metal ions. We estimated the half maximal inhibitory concentrations (IC₅₀) of methanogenesis of 120, 224, and 990 mgCOD·L^-1 for three types of anaerobic biomass, which indicated the enrichment and adaptation potentials of methanogenic biomass to the wastewater constituents. We operated an AnMBR (7.0 L, 35 °C) for 188 days with a mixture of BFC, phenol, acetate, and nutrients. The reactor showed a maximum average COD removal efficiency of 87.7 ± 7.0 %, that corresponded to an organic conversion rate of 286 ± 71 mgCOD^-1·L^-1d^-1. The microbial characterization of the reactor's biomass showed the acetoclastic methanogen Methanosaeta as the most abundant microorganism (43 %), whereas the aromatic and phenol degrader Syntrophorhabdus was continuously present with abundances up to 11.5 %. The obtained results offer the possibility for the application of AnMBRs for the treatment of BFC or other petrochemical wastewater.

Effect of Temperature on Anaerobic Fermentation of Poplar Ethanol Wastewater: Performance and Microbial Communities

Temperature plays an important role in anaerobic digestion (AD), and different substrates have different optimum temperatures in AD. However, the effect of temperature on the performance of AD when cellulosic ethanol wastewater was used as a substrate was rarely reported. Therefore, the digestion characteristics of cellulosic ethanol wastewater at 25, 35, 45, and 55 °C were investigated, and the microbial communities of the sludge sample were analyzed after fermentation. The results showed that the cumulative methane production was the highest at 55 °C, 906.40 ± 50.67 mL/g VS, which was 81.06, 72.42, and 13.33% higher than that at 25, 35, and 45 °C, respectively. The content of methane was 68.13, 49.26, 70.46, and 85.84% at the terminal period of fermentation at temperatures of 25, 35, 45, and 55 °C, respectively. The testing of volatile fatty acids (VFAs) indicated that the accumulation of VFAs did not occur when the fermentation was carried out at 25, 35, and 45 °C; however, the VFA content at 55 °C was much larger than that in the three groups (25, 35, and 45 °C), and the ratio of propionic acid to acetic acid was larger than 1.4 at the late stage of fermentation, so it inhibited the fermentation. The diversity of the microbial community indicated that the floral structure and metabolic pathway of fermentation were alike at 25 and 35 °C. Firmicutes and Proteobacteria were the main flora covering the 25-55 °C-based phylum or below it. The relative abundance of Methanosaeta was the highest when fermentation temperatures were 25 and 35 °C; however, its relative abundance decreased sharply and the relative abundance of Methanosarcina increased substantially when the temperature increased from 35 to 45 °C, which indicated that Methanosarcina can exist in higher temperatures. At the same time, hydrogenotrophic methanogens such as Methanoculleus and Methanothermobacter were dominant when fermentation temperatures were 45 and 55 °C, which indicated that the metabolic pathway changed from acetoclastic methanogenesis to hydrogenotrophic methanogenesis.

Seasonal characterization of the prokaryotic microbiota of full-scale anaerobic UASB reactors treating domestic sewage in southern Brazil

Upflow Anaerobic Sludge Blanket (UASB) reactors are alternatives in the anaerobic treatment of sanitary sewage in different parts of the world; however, in temperate environments, they are subject to strong seasonal influence. Understanding the dynamics of the microbial community in these systems is essential to propose operational alternatives, improve projects and increase the quality of treated effluents. In this study, for one year, high-performance sequencing, associated with bioinformatics tools for taxonomic annotation and functional prediction was used to characterize the microbial community present in the sludge of biodigesters on full-scale, treating domestic sewage at ambient temperature. Among the most representative phyla stood out Desulfobacterota (20.21-28.64%), Proteobacteria (7.48-24.90%), Bacteroidota (10.05-18.37%), Caldisericota (9.49-17.20%), and Halobacterota (3.23-6.55%). By performing a Canonical Correspondence Analysis (CCA), Methanolinea was correlated to the efficiency in removing Chemical Oxygen Demand (COD), Bacteroidetes_VadinHA17 to the production of volatile fatty acids (VFAs), and CI75cm.2.12 at temperature. On the other hand, Desulfovibrio, Spirochaetaceae_uncultured, Methanosaeta, Lentimicrobiaceae_unclassified, and ADurb.Bin063-1 were relevant in shaping the microbial community in a co-occurrence network. Diversity analyses showed greater richness and evenness for the colder seasons, possibly, due to the lesser influence of dominant taxa. Among the principal metabolic functions associated with the community, the metabolism of proteins and amino acids stood out (7.74-8.00%), and the genes related to the synthesis of VFAs presented higher relative abundance for the autumn and winter. Despite the differences in diversity and taxonomic composition, no significant changes were observed in the efficiency of the biodigesters.

Correlation Analysis of the Bacterial Community and Wood Properties of Populus × euramericana cv. “74/76” Wet Heartwood

Wetwood disease of poplar limits the processing and manufacturing of poplar, and the pathogenic bacteria of wet heartwood are poorly known. We used high-throughput sequencing methods to analyze the bacterial community of the heartwood, sapwood, root tissue, and rhizosphere soil of Populus × euramericana cv. “74/76” (poplar 107) in wetwood trees and healthy trees to explore the cause of poplar wetwood disease. Bacterial diversity and community structure were analyzed, and the correlation between wood properties and bacterial relative abundance was analyzed to explore their relationship. Two alpha-diversity indices of endophytic bacteria in the heartwood of wetwood trees were significantly (p < 0.05) lower than that in the heartwood of healthy trees, and the community structure between the two types of trees was significantly different. No significant differences in the alpha-diversity indices nor community structure were observed in the sapwood, root tissue, or rhizosphere bacterial community of diseased and healthy trees. The distribution of dominant bacteria genus in the heartwood of diseased and healthy trees differed. Proteiniphilum, Actinotalea, and Methanobacterium were the dominant genera in diseased trees’ heartwood. Proteiniphilum, Dysgonomonas, and Bacteroides were the dominant genera in healthy trees’ heartwood. The relative abundance of Proteiniphilum, Actinotalea, and Methanobacterium was significantly higher in the heartwood of wetwood trees than those of healthy trees. A db-RDA analysis found that these three bacterial genera were positively correlated with the rate of wet heartwood. These three bacterial genera may be the main pathogens causing poplar wetwood disease.

Functional Insights of Salinity Stress-Related Pathways in Metagenome-Resolved Methanothrix Genomes

Recently, methanogenic archaea belonging to the genus Methanothrix were reported to have a fundamental role in maintaining stable ecosystem functioning in anaerobic bioreactors under different configurations/conditions. In this study, we reconstructed three Methanothrix metagenome-assembled genomes (MAGs) from granular sludge collected from saline upflow anaerobic sludge blanket (UASB) reactors, where Methanothrix harundinacea was previously implicated with the formation of compact and stable granules under elevated salinity levels (up to 20 g/L Na⁺). Genome annotation and pathway analysis of the Methanothrix MAGs revealed a genetic repertoire supporting their growth under high salinity. Specifically, the most dominant Methanothrix (MAG_279), classified as a subspecies of Methanothrix_A harundinacea_D, had the potential to augment its salinity resistance through the production of different glycoconjugates via the N-glycosylation process, and via the production of compatible solutes as N^ε-acetyl-β-lysine and ectoine. The stabilization and reinforcement of the cell membrane via the production of isoprenoids was identified as an additional stress-related pathway in this microorganism. The improved understanding of the salinity stress-related mechanisms of M. harundinacea highlights its ecological niche in extreme conditions, opening new perspectives for high-efficiency methanisation of organic waste at high salinities, as well as the possible persistence of this methanogen in highly-saline natural anaerobic environments.

IMPORTANCE Using genome-centric metagenomics, we discovered a new Methanothrix harundinacea subspecies that appears to be a halotolerant acetoclastic methanogen with the flexibility for adaptation in the anaerobic digestion process both at low (5 g/L Na⁺) and high salinity conditions (20 g/L Na⁺). Annotation of the recovered M. harundinacea genome revealed salinity stress-related functions, including the modification of EPS glycoconjugates and the production of compatible solutes. This is the first study reporting these genomic features within a Methanothrix sp., a milestone further supporting previous studies that identified M. harundinacea as a key-driver in anaerobic granulation under high salinity stress.

A review on biogas upgrading in anaerobic digestion systems treating organic solids and wastewaters via biogas recirculation

Biogas upgrading is an essential process for efficient and safe utilization of biogas produced from anaerobic digestion (AD), a cost-effective and environmentally friendly technology for bioenergy recovery from organic wastes. Biogas recirculation in AD reactors has been recently reported as a cost-effective and promising method to enhance methane content in biogas. This review aimed to summarize the state-of-the-art of biogas recirculation-based AD systems to better understand the possible mechanisms and main factors relating to in-situ biogas upgrading. It shows that biogas recirculation in the AD reactor can not only enhance methane content via both physicochemical and biological effects, but also help establish a robust AD system with high buffering capacity for highly efficient treatment of various organic wastes. More research works are demanding for a better understanding of the mechanisms and the optimization of the whole AD system, targeting its further development for high-calorie bioenergy production.

Continuous H2/CO2 fermentation for acetic acid production under transient and continuous sulfide inhibition

Waste gas fermentation powered by renewable H₂ is reaching kiloton scale. The presence of sulfide, inherent to many waste gases, can cause inhibition, requiring additional gas treatment. In this work, acetogenesis and methanogenesis inhibition by sulfide were studied in a 10-L mixed-culture fermenter, supplied with CO₂ and connected with a water electrolysis unit for electricity-powered H₂ supply. Three cycles of inhibition (1.3 mM total dissolved sulfide (TDS)) and recovery were applied, then the fermenter was operated at 0.5 mM TDS for 35 days. During operation at 0.5 mM TDS the acetate production rate reached 7.1 ± 1.5 mmol C L^-1 d^-1. Furthermore, 43.7 ± 15.6% of the electrons, provided as H₂, were distributed to acetate and 7.7 ± 4.1% to butyrate, the second most abundant fermentation product. Selectivity of sulfide as inhibitor was demonstrated by a 7 days lag-phase of methanogenesis recovery, compared to 48 h for acetogenesis and by the less than 1% electrons distribution to CH₄, under 0.5 mM TDS. The microbial community was dominated by Eubacterium, Proteiniphilum and an unclassified member of the Eggerthellaceae family. The taxonomic diversity of the community decreased and conversely the phenotypic diversity increased, during operation. This work illustrated the scale-up potential of waste gas fermentations, by elucidating the effect of sulfide as a common gas impurity, and by demonstrating continuous, potentially renewable supply of electrons.

Evaluation of biochar addition and circulation control strengthening measures on efficiency and microecology of food waste treatment in anaerobic reactor

The process of strengthening an expanded granular sludge blanket (EGSB) reactor under ammonia nitrogen stress conditions and by adopting three strengthening measures, namely, opening the circulation (OC), adding modified biochar (MB), adding modified biochar along with opening the circulation (MBOC), to treat food waste was studied. When the ammonia nitrogen concentration of influent increased to 1200 mg/L, the removal rate of COD reduced to about 75%, while the removal rate of ammonia nitrogen was about 6%. The average COD removal rate of the anaerobic reactor in the last 5 days of each operating cycle i.e. OC, MB and MBOC, was 85.51%, 84.11% and 90.03%, respectively. At the 30th day of each treatment-OC, MB and MBOC, the protease content in the sludge was 44.61, 42.47, 46.24 NH₂-N (mg)/mg, respectively. and the content of coenzyme F₄₂₀ was 0.244, 0.217 and 0.267 mmol/g, respectively. Proteobacteria was the most abundant phylum in the stage I (OC), reaching 34.36%. It was accounted for 16.68% and 21.38%, respectively, in the stage II (MB) and stage III (MBOC). The dominant archaea in the three stages were Methanosaeta, whose abundance was 38.98% in stage I, which increased to 64.94% and 64.01% in stage II and III, respectively. Among the active carbohydrate enzymes, the gene abundance of Glycoside transferases in the MBOC stage was the largest among the three stages.

Elucidating the kinetics of ammonia inhibition to anaerobic digestion through extended batch experiments and stimulation-inhibition modeling

Ammonia can be accumulated to a level inhibitory to methanogenesis. There are large discrepancies in the reported inhibition thresholds. Through extended batch digestion experiments (up to 110 d) at 6 ammonia concentrations (0.70-13 g N/L), this study discovered sequential occurrence of adaptable and unadaptable inhibition that reveals the discrepancies. Lag phase length representing adaptable inhibition increased exponentially with ammonia concentration. The kinetics of specific biogas yield that reveals unadaptable inhibition was best simulated with the Han & Levenspiel model. The 50% unadaptable inhibition thresholds were 10.7 g N/L with active inoculum and 6.8 g/L with stressed inoculum. The digesters with stressed inoculum had faster adaptation to adaptable inhibition though less resistance to unadaptable inhibition. The inhibition sequence was evidenced by microbial population shifts and confirmed by earlier studies employing short (2-65 d) and long (80-198 d) batch experiments. Distinguishing adaptable from unadaptable inhibition provides precise guidance for mitigating ammonia inhibition.

A selective polypyrrole-based sub-ppm impedimetric sensor for the detection of dissolved hydrogen sulfide and ammonia in a mixture

An impedance-transducer sensor was developed for in situ detection of hydrogen sulfide (H₂S) and ammonia (NH₃) in aqueous media. Using cyclic voltammetry (CV), polypyrrole (PPy) was deposited on the surface of the microfabricated interdigitated gold electrode. Due to the proton acid doping effect of H₂S on PPy and ionic conduction of the film, the sensor showed a decreasing impedance response to H₂S unlike other reducing chemicals, i.e., ammonia (NH₃). The recorded faradaic data was then associated with an equivalent circuit and compared with that of NH₃ to examine the selectivity of the sensor. An electrochemical impedance spectroscopy (EIS) analysis was applied to the mixture of H₂S and NH₃ prepared at different ratios for the concentrations ranging from 2 ppm to 20 ppm (below 2-ppm, no response was observed due to the formation of NH₄HS, not sensible with PPy). The principal component analysis (PCA) was used to train a real-time prediction model for both classification (for the type of the analyte) and regression (the concentration of the analyte). The results showed the high performance of the sensor in determining individual analytes while the model was able to accurately predict the amount of H₂S and NH₃ in the mixture.

Effects of inhibitions by sodium ion and ammonia and different inocula on acetate-utilizing methanogenesis: Methanogenic activity and succession of methanogens

Acetate-fed anaerobic sequential batch experiments with four different inhibitory conditions (non-inhibitory (Lo), sodium-ion inhibitory (Na), ammonia inhibitory (Am), combined inhibitory (Hi)) were conducted using thirteen different inocula to investigate the inhibition effects by sodium-ion and ammonia and different inocula on acetate-utilizing methanogenesis and succession of methanogens. Sodium-ion and ammonia significantly extended lag-time λ and reduced specific-methanogenic-activity RCH4, and caused synergistic inhibition. The inhibition differed according to the initial methanogen community structures: the inhibition effects on λ and RCH4 were strongest ininocula with Methanosaeta concilii dominant and weakest in inocula with Methanoculleus bourgensis dominant. These inhibitory conditions determined the succession of methanogens: the most competitive methanogens were Methanosaeta concilii in Lo, Methanosarcina sp. in Na, Methanosarcina sp. and Methanoculleus bourgensis in Am, Methanoculleus bourgensis in Hi. This study provides valuable information for microbial management and optimization for AD processes treating wastewater that is rich in protein and/or salt.

Understanding methane emission from stored animal manure: A review to guide model development

National inventories of methane (CH₄ ) emission from manure management are based on guidelines from the Intergovernmental Panel on Climate Change using country-specific emission factors. These calculations must be simple and, consequently, the effects of management practices and environmental conditions are only crudely represented in the calculations. The intention of this review is to develop a detailed understanding necessary for developing accurate models for calculating CH₄ emission from liquid manure, with particular focus on the microbiological conversion of organic matter to CH₄ . Themes discussed are (a) the liquid manure environment; (b) methane production processes from a modeling perspective; (c) development and adaptation of methanogenic communities; (d) mass and electron conservation; (e) steps limiting CH₄ production; (f) inhibition of methanogens; (g) temperature effects on CH₄ production; and (h) limits of existing estimation approaches. We conclude that a model must include calculation of microbial response to variations in manure temperature, substrate availability and age, and management system, because these variables substantially affect CH₄ production. Methane production can be reduced by manipulating key variables through management procedures, and the effects may be taken into account by including a microbial component in the model. When developing new calculation procedures, it is important to include reasonably accurate algorithms of microbial adaptation. This review presents concepts for these calculations and ideas for how these may be carried out. A need for better quantification of hydrolysis kinetics is identified, and the importance of short- and long-term microbial adaptation is highlighted.

Comparison of microbial community structures between mesophilic and thermophilic anaerobic digestion of vegetable waste

The anaerobic digestion performance correlates with the functional microbial community. Mesophilic and thermophilic digestions of vegetable waste were conducted, and dynamics of the microbial community were investigated. The mesophilic and thermophilic collapsed stages occurred at organic loading rates of 1.5 and 2.0 g VS/(L d) due to the accumulation of volatile fatty acids with final concentrations of 2276 and 6476 mg/L, respectively. A high concentration of volatile fatty acids caused the severe inhibition of methanogens, which finally led to the imbalance between acetogenesis and methanogenesis. The mesophilic digestion exhibited a higher microbial diversity and richness than the thermophilic digestion. Syntrophic acetate-oxidizing coupled with hydrogenotrophic methanogenesis was the dominant pathway in the thermophilic stable system, and acetoclastic methanogenesis in the mesophilic stable system. The dominant acidogens, syntrophus, and methanogens were unclassified_f__Anaerolineaceae (8.68%), Candidatus_Cloacamonas (19.70%), Methanosaeta (6.10%), and Methanosarcina (4.08%) in the mesophilic stable stage, and Anaerobaculum (12.59%), Syntrophaceticus (4.84%), Methanosarcina (30.58%), and Methanothermobacter (3.17%) in thermophilic stable stage. Spirochaetae and Thermotogae phyla were the characteristic microorganisms in the mesophilic and thermophilic collapsed stages, respectively. These findings provided valuable information for the deep understanding of the difference of the microbial community and methane-producing mechanism between mesophilic and thermophilic digestion of vegetable waste.

Ammonia stress decreased biomarker genes of acetoclastic methanogenesis and second peak of production rates during anaerobic digestion of swine manure

Research shows that anaerobic digestion could acclimate to ammonia stress; however, the acclimation remained unaddressed. In this study, evolution of microbial community, functional gene, and pathway was linked with apparent kinetic and performance in unacclimated inoculum under ammonia stress, to deepen understanding of the acclimation. The second peak in production rate demonstrated crucial kinetic changes under ammonia stress. The methane loss was mainly protein in residual COD. Metagenomic showed initial inhibition in all methane metabolism pathways under ammonia stress, and recovery in acetate uptake was the key to ammonia acclimation. The acclimation was found in alternative pathway of Acetyl-CoA (CH₃CO-S-CoA) synthesis from acetate, accompanying by syntrophic methanogenesis. Ammonia inhibited acetoclastic methanogenesis by competing CH₃-CO-P_i with pta and formed speculative sediment CH₃-CO-PO₄[NH₄]₂. Biomarker of methanogenesis kinetic was suggested as mcr, hdr, and mch. The biomarker could indicate acclimation stages to ammonia, empowering anaerobic digestion by early warning of methane loss.

Effect of viscosity on process stability and microbial community composition during anaerobic mesophilic digestion of Maotai-flavored distiller's grains

To investigate the effects of viscosity on the mesophilic digestion of Maotai-flavored distiller's grains, a continuous experiment was conducted in a 70 L reactor at organic loading rates of 3, 4, 5, and 6 g VS/(L·d) with and without effluent recirculation. High organic loading rates and continuous effluent recirculation increased the digestate viscosity, and high viscosity caused severe foaming, which blocked the biogas outlet pipe. Moreover, a viscosity above 782 mPa·s was proposed as an early warning indicator for foaming. A maximum volumetric biogas production rate of 1.72 L/(L·d) was accomplished by diluting the feed without effluent recirculation at a recommended organic loading rate of 5 g VS/(L·d). Proteiniphilum, Ruminococcus_2, norank_f_Synergistaceae, norank_o__DTU014, Syntrophomonas, Methanosarcina, Methanobacterium, and Methanosaeta were the dominant acidogens, syntrophic bacteria, and methanogens existed in both low and high viscosity groups. Candidatus_Methanofastidiosum capable of employing the methylated thiol reduction pathway was found only in the high viscosity system.

Enhancement of methane production and phosphorus recovery with a novel pre-treatment of excess sludge using waste plaster board

A new pre-treatment process for excess sludge is proposed to increase methane production and recover phosphorus by adding waste plaster board as calcium sulfate. The content of calcium sulfate in the plaster granules (PG) used in this study is 99%. When PG and calcium sulfate are added to the excess sludge generated from a municipal wastewater treatment plant, acetate production is enhanced as per sulfate reduction and phosphorus release is reduced via the formation of calcium phosphate. In the continuous pre-treatment experiment performed at 25 °C and for 10 days of sludge retention time (SRT) using calcium sulfate, 1935 ± 395 mg/L of acetate is produced with 1070 ± 255 mg/L of sulfate, which is reduced. Desulfobulbus spp., which can oxidize organic matter to acetate incompletely, have been observed in the pre-treated sludge. The pre-treated sludge has subsequently been used for methophiric anaerobic digestion. The methane yield from the pre-treated sludge is found to be 1.2 times that of the non-pretreated sludge at an SRT of 30 days, indicating that the pre-treatment using PG can improve methane production. Phosphorus is released from the non-pretreated sludge in the digester. Nevertheless, a decrease in phosphorus content has been observed, resulting in the digested sludge containing calcium phosphate that is useful for agriculture.

Linking process performances and core microbial community structures in anaerobic membrane bioreactor with rotatory disk (ARMBR) system fed with high-strength food waste recycling wastewater

This study first evaluated the process performances and microbial community structures of anaerobic rotary membrane bioreactor (ARMBR) fed with food waste recycling wastewater (FRW). Three identical ARMBRs were operated under different organic loading rate (OLR) conditions (1.5, 3.0, and 6.0 kg COD m^-3 d^-1) after the same start-up periods. The start-up performances and archaeal community structures differed among the ARMBRs, probably due to the sudden OLR shock. After the start-up, bio-methane was stably produced until the end of the operational period, with all of the ARMBRs showing >95% COD removal efficiency. Methanosaeta spp. was the predominant methanogen; diverse hydrogenotrophic methanogens co-existed. Bacteroidetes-like bacteria and Candidatus Cloacamonas acted as major fermentative bacteria producing acetate or hydrogen for the growth of methanogens. The results suggest that our ARMBR system can be a promising option to manage high-strength organic wastewater such as FRW.

High-efficiency salt, sulfate and nitrogen removal and microbial community in biocathode microbial desalination cell for mustard tuber wastewater treatment

Considering there is no study involving simultaneous salt, sulfate and nitrogen removal from high-salinity mustard tuber wastewater (MTWW), biocathode microbial desalination cell (BMDC) was first constructed and used to treat MTWW. The results showed that 97.4% of salt, 99.7% of sulfate and 99.8% of nitrogen could be removed from MTWW. The relative abundances of electrgenic bacteria in anode and cathode were 15.95% and 15.10%, respectively, which greatly promoted the electricity generation and desalination. The bacteria involved in sulfate reduction in anode were the dominant population, with relative abundance of 13.94%. Microbial community analysis of cathode biofilm indicated that autotrophic nitrification-anaerobic denitrification, electrochemical reduction and anaerobic ammonium oxidation might coexist for high-efficiency nitrogen removal. Besides, the BMDC showed stable power output for 150 days. These findings provide a promising approach for efficient treatment of MTWW.

Magnetite as an enhancer in methanogenic degradation of volatile fatty acids under ammonia-stressed condition

Anaerobic batch tests with a 2² full-factorial design of ammonia (1.5, 6.5 g N/L) and magnetite concentrations (0, 20 mmol/L) were conducted separately for methanogenic degradation of acetate, propionate, and butyrate (volatile fatty acids (VFAs)) to 1) quantify the effect of magnetite as an enhancer in methanogenic degradation of each of the VFAs in conditions without ammonia stress (1.5 g N/L) and with ammonia stress (6.5 g N/L), and 2) identify methanogenic consortia that are related to such enhancement. Among the three VFAs, methanogenic degradation of propionate was the least feasible (57% lower specific methanogenic activity R_CH4 and three times longer lag time λ than acetate degradation). At low ammonia concentration, only propionate showed improvement in R_CH4 (46%) with supplementation of magnetite. In the ammonia-stressed condition without magnetite, R_CH4 decreased by 38-58% and λ increased 2.2-8.8 times for all VFAs; magnetite supplementation significantly alleviated these effects. These results demonstrate that magnetite supplementation effectively increases methanogenic degradation of the VFAs even under ammonia-stressed conditions. 16S metagenomic sequencing revealed that distinctive methanogenic consortia were active in the different combinations of substrate, ammonia and magnetite. Alkaliphilus, Hyphomonadaceae SWB02 and Clostridia DTU014, Clostridia D8A-2, Christensenellaceae R-7 group and Rikenellaceae DMER64 were identified as potential syntrophic bacteria that can establish magnetite-mediated direct electron transfer with methanogens (Methanosaeta concilii, Methanosaeta harundinacea, Methanolinea tarda, Methanoculleus bourgensis and Methanosarcina spp.) during methanogenic degradation of VFAs. The results may be useful as a reference to develop effective strategies using magnetite supplementation to remediate anaerobic digestion processes that have been afflicted by VFA accumulation and ammonia inhibition.