Extradiol dioxygenase-SiO₂ sol-gel modified electrode for catechol and its derivatives detection

Electrochemical Sensing Systems for the Analysis of Catechol and Hydroquinone in the Aquatic Environments: A Critical Review

Because of their unique physical, chemical, and biological characteristics, conductive nanomaterials have a lot of potential for applications in materials science, energy storage, environmental science, biomedicine, sensors/biosensors, and other fields. Recent breakthroughs in the manufacture of carbon materials, conductive polymers, metals, and metal oxide nanoparticles based electrochemical sensors and biosensors for applications in environmental monitoring by detection of catechol (CC) and hydroquinone (HQ) are presented in this review. To achieve this goal, we first introduced recent works that discuss the effects of phenolic compounds and the need for accurate, inexpensive, and quick monitoring, and then we focused on the use of the most important applications of nanomaterials, such as carbon-based materials, metals, and metal oxides nanoparticles, and conductive polymers, to develop sensors to monitor catechol and hydroquinone. Finally, we identified challenges and limits in the field of sensors and biosensors, as well as possibilities and recommendations for developing the field for better future applications. Meanwhile, electrochemical sensors and biosensors for catechol and hydroquinone measurement and monitoring were highlighted and discussed particularly. This review, we feel, will aid in the promotion of nanomaterials for the development of innovative electrical sensors and nanodevices for environmental monitoring.

Structure Elucidation and Biochemical Characterization of Environmentally Relevant Novel Extradiol Dioxygenases Discovered by a Functional Metagenomics Approach

The release of synthetic chemical pollutants in the environment is posing serious health risks. Enzymes, including oxygenases, play a crucial role in xenobiotic degradation. In the present study, we employed a functional metagenomics approach to overcome the limitation of cultivability of microbes under standard laboratory conditions in order to isolate novel dioxygenases capable of degrading recalcitrant pollutants. Fosmid clones possessing dioxygenase activity were further sequenced, and their genes were identified using bioinformatics tools. Two positive fosmid clones, SD3 and RW1, suggested the presence of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC-SD3) and catechol 2,3-dioxygenase (C23O-RW1), respectively. Recombinant versions of these enzymes were purified to examine their pollutant-degrading abilities. The crystal structure of BphC-SD3 was determined at 2.6-Å resolution, revealing a two-domain architecture, i.e., N-terminal and C-terminal domains, with the sequential arrangement of βαβββ in each domain, characteristic of Fe-dependent class II type I extradiol dioxygenases. The structure also reveals the presence of conserved amino acids lining the catalytic pocket and Fe³⁺ metal ion in the large funnel-shaped active site in the C-terminal domain. Further studies suggest that Fe³⁺ bound in the BphC-SD3 active site probably imparts aerobic stability. We further demonstrate the potential application of BphC-SD3 in biosensing of catecholic compounds. The halotolerant and oxygen-resistant properties of these enzymes reported in this study make them potential candidates for bioremediation and biosensing applications.IMPORTANCE The disposal and degradation of xenobiotic compounds have been serious issues due to their recalcitrant properties. Microbial oxygenases are the fundamental enzymes involved in biodegradation that oxidize the substrate by transferring oxygen from molecular oxygen. Among oxygenases, catechol dioxygenases are more versatile in biodegradation and are well studied among the bacterial world. The use of catechol dioxygenases in the field is currently not practical due to their aerobically unstable nature. The significance of our research lies in the discovery of aerobically stable and halotolerant catechol dioxygenases that are efficient in degrading the targeted environmental pollutants and, hence, could be used as cost-effective alternatives for the treatment of hypersaline industrial effluents. Moreover, the structural determination of novel catechol dioxygenases would greatly enhance our knowledge of the function of these enzymes and facilitate directed evolution to further enhance or engineer desired properties.

Sensitive and Simultaneous Electrochemical Sensing for Three Dihydroxybenzene Isomers Based on Poly(L-arginine) Modified Glassy Carbon Electrode

The simultaneous and sensitive electrochemical detection of dihydroxybenzene isomers (hydroquinone, HQ; catechol, CC; resorcinol, RS) is of great significance because such isomers can be awfully harmful to the environment and human health. In this paper, by preparing poly(L-arginine) modified glassy carbon electrode (P-L-Arg/GCE) with a simple method, a highly sensitive electrochemical sensor for simultaneously detecting HQ, CC and RS was constructed successfully due to the large surface area, good electronic properties and catalytic ability of P-L-Arg/GCE and the electrostatic action between P-L-Arg (positive) and targets (negative). Under the optimized conditions, the results show that the P-L-Arg/GCE has a wide linear range from 0.1 to 110.0 μM for HQ ,CC and RS. The detection limits for HQ, CC and RS are 0.01, 0.03 and 0.1 μM, respectively. Finally, the proposed sensor was successfully applied in real sample analysis.

Cyclodextrin-functionalized hollow carbon nanospheres by introducing nanogold for enhanced electrochemical sensing of o-dihydroxybenzene and p-dihydroxybenzene

A cyclodextrin–gold nanoparticles/hollow carbon nanospheres nanohybrid was prepared for the sensitive simultaneous electrochemical sensing of o- and p-dihydroxybenzene.

Ormosil gels doped with engineered catechol 1,2 dioxygenases for chlorocatechol bioremediation

Enzymes entrapped in wet, nanoporous silica gel have great potential as bioreactors for bioremediation because of their improved thermal, chemical, and mechanical stability with respect to enzymes in solution. The B isozyme of catechol 1,2 dioxygenase from Acinetobacter radioresistens and its mutants of Leu69 and Ala72, designed for an increased reactivity toward the environmental pollutant chlorocatechols, were encapsulated using alkoxysilanes and alkyl alkoxysilanes as precursors in varying proportions. Encapsulation of the mutants in a hydrophobic tetramethoxysilane/dimethoxydimethylsilane-based matrix yielded a remarkable 10- to 12-fold enhancement in reactivity toward chlorocatechols. These gels also showed a fivefold increase in relative reactivity toward chlorocatechols with respect to the natural substrate catechol, thus compensating for their relatively low activity for these substrates in solution. The encapsulated enzyme, unlike the enzyme in solution, proved resilient in assays carried out in urban wastewater and bacteria-contaminated solutions mimicking environmentally relevant conditions. Overall, the combination of a structure-based rational design of enzyme mutants, and the selection of a suitable encapsulation material, proved to be a powerful approach for the production and optimization of a potential bioremediation device, with increased activity and resistance toward bacterial degradation.