Highly sensitive detection of α-naphthol based on G-DNA modified gold electrode by electrochemical impedance spectroscopy

Co-inducible Catabolism of 2-Naphthol Initiated by Hydroxylase CehC1C2 in Rhizobium sp. X9 Removed Its Ecotoxicity

2-Naphthol, which originates from various industrial activities, is widely disseminated through the discharge of industrial wastewater and is, thus, harmful to the water ecosystem, agricultural production, and human health. In this study, the carbaryl degrading strain Rhizobium sp. X9 was proven to be able to degrade 2-naphthol and reduce its toxicity to rice (Oryza sativa) and Chlorella ellipsoidea. Two-component hydroxylase CehC1C2 is responsible for the initial step of degradation and generates 1,2-dihydroxynaphthalene, which is further degraded by the ceh cluster. The transcription of gene cluster cehC1C2 could be induced when both 2-naphthol and glucose were added. A bioinformatic analysis revealed that two transcriptional regulators, the inhibitor CehR2 and the activator CehR3, could be involved in this process. Our study elucidated the molecular mechanism of microbial degradation of 2-naphthol and provided an effective strategy for the in situ remediation of 2-naphthol contamination in the environment.

A novel covalent triazine framework developed for efficient determination of 1-naphthol in water

Covalent triazine frameworks (CTFs) are an exciting new class of porous organic materials with excellent chemical stability and easy functionalization. In recent years, CTFs have gained increasing attention in electrochemical detection of environmental contaminants. Herein, a novel CTF material was successfully synthesized by the solvothermal condensation of 1,3,5-tris-(4-aminophenyl)triazine (TAPT) and 2,3,6,7-tetrabromonapthalene dianhydride (TBNDA) for determination of 1-naphthol in water. The obtained CTF, denoted here as TATB, comprised uniformly sized spherical particles (diameter 0.5-2 μm) with a highly conjugated structure that benefited electron transfer processes when applied to a glassy carbon electrode (GCE). A TATB/GCE working electrode showed excellent catalytic activity for the oxidation of 1-naphthol, with the oxidation peak current being directly proportional to the 1-naphthol concentration in the range of 0.01-10.0 μM, with a detection limit of 5.0 nM (S/N = 3). In addition, the TATB/GCE sensor possesses excellent reproducibility, sensitivity, and selectivity for 1-naphthol determination in aqueous solution. This work highlights the potential of CTFs in electrochemical sensing, whilst also demonstrating a sensitive and stable sensor platform for 1-naphthol detection in water.

Electrochemical sensing for naphthol isomers based on the in situ growth of zeolitic imidazole framework-67 on ultrathin CoAl layered double hydroxide nanosheets by a reaction-diffusion technique

It is established that ultrathin layered double hydroxide nanosheets (LDHNS) and zeolitic imidazole frameworks (ZIF) are desirable electrochemical sensing modifiers owing to their large surface area and abundant catalytic sites. Integration of them is thus an effective solution to maximize their electrocatalytic activity. Herein, a novel reaction-diffusion framework (RDF) technique is applied for the in situ growth of ZIF-67 on ultrathin CoAl-LDHNS (CoAl-LDHNS@ZIF-67). In a confined space of the agar gel matrix of RDF, the coordination reaction between organic ligands and CoAl-LDHNS without an additional Co²⁺ source achieves the controllable growth of ZIF-67 crystals through a long vertical diffusion. The prepared composite comprises both CoAl-LDHNS and ZIF-67 components with a certain ratio and provides a large surface area and amply catalytic sites, thus realizing a rapid transfer of electron and mass. The CoAl-LDHNS@ZIF-67 modified electrode is employed for the simultaneous detection of naphthol isomers by differential pulse voltammetry. Naphthol isomers display anodic reactions with a wide peak potential difference, allowing their simultaneous detection feasible. Voltammetric responses of α-naphthol and β-naphthol follow good linearity against the concentration in a wide range from 0.3 to 150 μM with limits of detection of 54 and 82 nM, respectively. The proposed sensor also demonstrates excellent selectivity, stability, reproducibility, and practicability for the simultaneous detection of naphthol isomers.

Electrochemical sensing platform for naphthol isomers based on in situ growth of ZIF-8 on reduced graphene oxide by a reaction-diffusion technique

Enhancing the dispersibility and conductivity is an effective solution to develop the application zeolitic imidazole frameworks (ZIF) in the electrochemical field. This work thus employs a novel reaction-diffusion framework (RDF) technique for the in situ growth of ZIF-8 crystals on graphene oxide (GO@ZIF-8) matrixes. In detail, the outer electrolyte of 2-methyl imidazole naturally diffuses into the inner agar gel matrix containing Zn²⁺ cations and GO nanosheets. The long reaction-diffusion makes the growth of ZIF-8 crystals controllable in a vertical gradient. After thermal treatment, the title product of ZIF-8 in situ grown on reduced graphene oxide (rGO@ZIF-8) is obtained and thus exhibits good dispersibility, high conductivity, large surface area, and more catalytic sites. The glassy carbon electrode (GCE) was modified by casting the rGO@ZIF-8 suspension. The obtained rGO@ZIF-8/GCE displays excellent catalytic activity toward naphthol (NAP) isomers. Under the optimal conditions, the amperometric currents of 1-NAP and 2-NAP demonstrate the good linear relationship in wide ranges of 0.05-12 μM and 0.02-15 μM, respectively. Their limits of detection are as low as 15 and 17 nM, respectively. The fabricated modified electrode exhibits excellent selectivity, stability, and reproducibility. The sensor is also utilized to detect NAP molecules in real water samples and indicates good accuracy and reliability.

Label-free hairpin-like aptamer and EIS-based practical, biostable sensor for acetamiprid detection

Acetamiprid (ACE) is a kind of broad-spectrum pesticide that has potential health risk to human beings. Aptamers (Ap-DNA (1)) have a great potential as analytical tools for pesticide detection. In this work, a label-free electrochemical sensing assay for ACE determination is presented by electrochemical impedance spectroscopy (EIS). And the specific binding model between ACE and Ap-DNA (1) was further investigated for the first time. Circular dichroism (CD) spectroscopy and EIS demonstrated that the single strand AP-DNA (1) first formed a loosely secondary structure in Tris-HClO₄ (20 mM, pH = 7.4), and then transformed into a more stable hairpin-like structure when incubated in binding buffer (B-buffer). The formed stem-loop bulge provides the specific capturing sites for ACE, forming ACE/AP-DNA (1) complex, and induced the R_CT (charge transfer resistance) increase between the solution-based redox probe [Fe(CN)₆]^3−/4− and the electrode surface. The change of ΔR_CT (charge transfer resistance change, ΔR_CT = R_CT(after)-R_CT(before)) is positively related to the ACE level. As a result, the AP-DNA (1) biosensor showed a high sensitivity with the ACE concentration range spanning from 5 nM to 200 mM and a detection limit of 1 nM. The impedimetric AP-DNA (1) sensor also showed good selectivity to ACE over other selected pesticides and exhbited excellent performance in environmental water and orange juice samples analysis, with spiked recoveries in the range of 85.8% to 93.4% in lake water and 83.7% to 89.4% in orange juice. With good performance characteristics of practicality, sensitivity and selectivity, the AP-DNA (1) sensor holds a promising application for the on-site ACE detection.

Metabolite Profile Differences Among Different Storage Time in Beef Preserved at Low Temperature

Storage temperature influences meat color stability and quality. This study was performed to quality change-associated metabolites profiles using a nontargeted liquid chromatography-mass spectrometry (LC-MS/MS)-based method. Beef longissimus dorsi samples were purchased immediately after slaughter, and then stored at room temperature, 4 °C and 0 °C. Water holding capacity (WHC), moisture content and pH value of the muscle samples were detected. Muscle samples and quality control samples were then prepared for nontargeted LC-MS/MS system, followed by identification of distinct metabolites. Pearson correlation coefficients between metabolites and quality indexes were calculated. Storage reduced pH values of beef, and room temperature and 4 °C displayed the lowest pH value. Moisture content and WHC in beef muscles, especially WHC declined obviously during the first 24 hr. The significantly altered metabolites profiles in meat samples at 0, 3.5, and 7 days during 4 °C storage were identified using LC-MS/MS. Most metabolites showed linear changes during storage (0 to 7 days). Using Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis, we found 1(α)-naphthol, urocanic acid, tyramine, guanine, histamine, picolinic acid, 4-hydroxybenzaldehyde, and hypoxanthine were increased, and 2-(S-glutathionyl)acetyl glutathione and glutathione were decreased in beef during 4 °C storage. Correlation analysis showed there were significantly correlations between metabolites and meat quality indexes (WHC, moisture content, and pH). In summary, 1(α)-naphthol, urocanic acid, tyramine, guanine, histamine, picolinic acid, 4-hydroxybenzaldehyde, and hypoxanthine, proved to be harmful to human body, accumulated gradually, especially after 3.5 days during storage at 4 °C. While the contents of beneficial substances, including 2-(S-glutathionyl)acetyl glutathione and glutathione, were decreased, which provided reference for the nutrition guidance of using beef meat.

DNA conformational polymorphism for biosensing applications

In this mini review, we will briefly introduce the rapid development of DNA conformational polymorphism in biosensing field, including canonical DNA duplex, triplex, quadruplex, DNA origami, as well as more functionalized DNAs (aptamer, DNAzyme etc.). Various DNA structures are adopted to play important roles in sensor construction, through working as recognition receptor, signal reporter or linking staple for signal motifs, etc. We will mainly summarize their recent developments in DNA-based electrochemical and fluorescent sensors. For the electrochemical sensors, several types will be included, e.g. the amperometric, electrochemical impedance, electrochemiluminescence, as well as field-effect transistor sensors. For the fluorescent sensors, DNA is usually modified with fluorescent molecules or novel nanomaterials as report probes, excepting its core recognition function. Finally, general conclusion and future perspectives will be discussed for further developments.

Quantum dot-based electrochemical biosensor for stripping voltammetric detection of telomerase at the single-cell level

Human telomerase is responsible for the maintenance of chromosome end structures and is a valuable biomarker for malignant growth. However, the accurate measurement of telomerase activity at the single-cell level has remained a great challenge. Here we develop a simple quantum dot (QD)-based electrochemical biosensor for stripping voltammetric detection of telomerase activity at the single-cell level. We designed a thiol-modified capture DNA which may be immobilized on the gold electrode by the gold-sulfur bond. The presence of telomerase enables the addition of the telomere repeats of (TTAGGG)_n to the 3' end of the primer, accompanied by the incorporation of abundant biotins in the extension product with the assistance of the biotin-tagged dATP. The subsequent hybridization of extension product with the capture DNA and the addition of streptavidin-coated QDs induce the assembly of large amounts of QDs onto the electrode via specific biotin-streptavidin binding. After the acidic dissolution of QDs, the released Cd (II) can be simply quantified by anodic stripping voltammetry (ASV). Due to the introduction of large amounts of QDs by telomerase-induced primer extension reaction and the synergistic signal amplification induced by the release of Cd (II) from the QDs, this biosensor can detect telomerase activity at the single-cell level without the involvement of any thermal cycling and extra enzymes for signal amplification. Moreover, this assay exhibits a large dynamic range over four orders of magnitude and it is very simple without the involvement of specific hairpin probe design and complicated labelling, holding great potential in point-of-need testing.

Electrochemical and AFM Characterization of G-Quadruplex Electrochemical Biosensors and Applications

Guanine-rich DNA sequences are able to form G-quadruplexes, being involved in important biological processes and representing smart self-assembling nanomaterials that are increasingly used in DNA nanotechnology and biosensor technology. G-quadruplex electrochemical biosensors have received particular attention, since the electrochemical response is particularly sensitive to the DNA structural changes from single-stranded, double-stranded, or hairpin into a G-quadruplex configuration. Furthermore, the development of an increased number of G-quadruplex aptamers that combine the G-quadruplex stiffness and self-assembling versatility with the aptamer high specificity of binding to a variety of molecular targets allowed the construction of biosensors with increased selectivity and sensitivity. This review discusses the recent advances on the electrochemical characterization, design, and applications of G-quadruplex electrochemical biosensors in the evaluation of metal ions, G-quadruplex ligands, and other small organic molecules, proteins, and cells. The electrochemical and atomic force microscopy characterization of G-quadruplexes is presented. The incubation time and cations concentration dependence in controlling the G-quadruplex folding, stability, and nanostructures formation at carbon electrodes are discussed. Different G-quadruplex electrochemical biosensors design strategies, based on the DNA folding into a G-quadruplex, the use of G-quadruplex aptamers, or the use of hemin/G-quadruplex DNAzymes, are revisited.

Chemiluminescence assay for detection of 2-hydroxyfluorene using the G-quadruplex DNAzyme-H2O2-luminol system

A chemiluminescence (CL) based assay is described for the determination of the environmental pollutant 2-hydroxyfluorene (2-HOFlu) which is found to inhibit the CL of a system composed of the G-quadruplex/hemin complex (a DNAzyme), H₂O₂, and luminol. The G-rich aptamer PW17 is transformed to a potassium(I)-stabilized G-quadruplex-hemin complex which displays peroxidase-like activity to catalyze the oxidation of luminol by H₂O₂ which is accompanied by strong blue CL emission. On addition of 2-HOFlu, it will participate in the G-quadruplex DNAzyme-mediated oxidation by H₂O₂. As a result, CL intensity is decreased. The difference in CL intensity (ΔI) before and after addition of 2-HOFlu serves as the signal for its quantitation. In water of pH 9.0, a linear relationship is found for the 1 nM to 1 μM concentration range, with a 0.2 nM detection limit. The assay is highly selective over other fluorene derivatives. It was successfully applied to the determination of 2-HOFlu in spiked lake water samples. The method is rapid, cost-effective and convenient. Conceivably, it has a wide scope in that it may be applied to other target pollutants for which G-quadruplexes are available. Graphical abstract A chemiluminescence (CL) assay is described for the determination of the environmental pollutant 2-hydroxyfluorene (2-HOFlu) based on the inhibition of the CL system composed of the G-quadruplex/hemin complex (a DNAzyme), H₂O₂, and luminol.

Zeolitic imidazolate framework 8 (ZIF-8) reinforced macroporous resin D101 for selective solid-phase extraction of 1-naphthol and 2-naphthol from phenol compounds

Macroporous resin has been attracting intensive attention due to its critical role in separation and purification of natural products. Herein, a zeolitic imidazolate framework 8 reinforced macroporous resin D101 was prepared via a room temperature growth method and used for dispersive SPE of 1-naphthol and 2-naphthol. The parameters affecting the adsorption and desorption efficiency such as the sample pH, adsorbent amount, extraction time, desorption solvent, and desorption time were investigated. The as-prepared adsorbent showed selectivity for 1-naphthol and 2-naphthol compared to other phenols. Under the optimum dispersive SPE conditions, the detection of 1-naphthol and 2-naphthol coupled with a CZE method was conducted and the LODs for 1-naphthol and 2-naphthol were 1.37 and 1.43 ng/mL, respectively. Moreover, the results of urine sample analysis showed the spiked recoveries to be in the range of 96.2-106.9%. This study indicated that D101@ZIF-8 (where ZIF is zeolitic imidazolate framework) is a promising selective adsorbent for the analysis of 1-naphthol and 2-naphthol in urine samples.

Aptamer-based biosensor for label-free detection of ethanolamine by electrochemical impedance spectroscopy

A label-free sensing assay for ethanolamine (EA) detection based on G-quadruplex-EA binding interaction is presented by using G-rich aptamer DNA (Ap-DNA) and electrochemical impedance spectroscopy (EIS). The presence of K(+) induces the Ap-DNA to form a K(+)-stabilized G-quadruplex structure which provides binding sites for EA. The sensing mechanism was further confirmed by circular dichroism (CD) spectroscopy and EIS measurement. As a result, the charge transfer resistance (RCT) is strongly increased as demonstrated by using the ferro/ferricyanide ([Fe(CN)6](3-/4-)) as a redox probe. Under the optimized conditions, a linear relationship between ΔRCT and EA concentration was obtained over the range of 0.16 nM and 16 nM EA, with a detection limit of 0.08 nM. Interference by other selected chemicals with similar structure was negligible. Analytical results of EA spiked into tap water and serum by the sensor suggested the assay could be successfully applied to real sample analysis. With the advantages of high sensitivity, selectivity and simple sensor construction, this method is potentially suitable for the on-site monitoring of EA contamination.

Synthesis of polyaniline via DNAzyme-catalyzed polymerization of aniline

Under simple and mild conditions, G-quadruplex DNAzyme-catalyzed oxidation and polymerization of aniline by hydrogen peroxide is achieved in aqueous medium.