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Antonio ES, Fraga RE, Silva JG. Viral Diagnosis in Psittacine Birds: A Scientometric and Systematic Review of 47 Years. Animals (Basel) 2024; 14:1546. [PMID: 38891593 PMCID: PMC11171333 DOI: 10.3390/ani14111546] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2023] [Revised: 11/23/2023] [Accepted: 11/27/2023] [Indexed: 06/21/2024] Open
Abstract
The first reports of viruses in psittacine birds date back to the early 1970s. Here, we elucidate the differences among these previous studies and the advances achieved. The objective of this study was to carry out a comprehensive review using both scientometric and systematic methods to analyze the evolution of published studies on viruses in psittacine birds up to 2022. The search descriptors "virus", "diagnosis", and "Psittaciformes" were used to find the articles of interest for this study. A total of 118 articles were manually selected, and the scientometric data were organized using the software VOSviewer® version 1.6.18. The present review revealed that: (i) on average, 2.5 articles/year on the diagnosis of viral infection in psittacine birds were published since 1975; (ii) the most productive research groups are concentrated in three countries: Australia, the United States, and Germany; (iii) the most important virus in psittacine birds is the Circovirus, which causes psittacine beak and feather disease; (iv) the diagnostic method of choice is polymerase chain reaction (PCR); and (v) the most studied psittacine birds were those in the Psittacidae family that were kept in captivity.
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Affiliation(s)
- Edma Santos Antonio
- Programa de Pós-Graduação em Genética e Biologia Molecular, Departamento de Ciências Biológicas, Universidade Estadual de Santa Cruz, Campus Soane Nazaré de Andrade, Ilhéus 45662-900, BA, Brazil;
| | - Ricardo Evangelista Fraga
- Instituto Multidisciplinar em Saúde, Universidade Federal da Bahia, Campus Anísio Teixeira, Vitória da Conquista 45029-094, BA, Brazil;
| | - Janisete Gomes Silva
- Programa de Pós-Graduação em Genética e Biologia Molecular, Departamento de Ciências Biológicas, Universidade Estadual de Santa Cruz, Campus Soane Nazaré de Andrade, Ilhéus 45662-900, BA, Brazil;
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2
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Garrigós M, Garrido M, Panisse G, Veiga J, Martínez-de la Puente J. Interactions between West Nile Virus and the Microbiota of Culex pipiens Vectors: A Literature Review. Pathogens 2023; 12:1287. [PMID: 38003752 PMCID: PMC10675824 DOI: 10.3390/pathogens12111287] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Revised: 10/21/2023] [Accepted: 10/25/2023] [Indexed: 11/26/2023] Open
Abstract
The flavivirus West Nile virus (WNV) naturally circulates between mosquitoes and birds, potentially affecting humans and horses. Different species of mosquitoes play a role as vectors of WNV, with those of the Culex pipiens complex being particularly crucial for its circulation. Different biotic and abiotic factors determine the capacity of mosquitoes for pathogen transmission, with the mosquito gut microbiota being recognized as an important one. Here, we review the published studies on the interactions between the microbiota of the Culex pipiens complex and WNV infections in mosquitoes. Most articles published so far studied the interactions between bacteria of the genus Wolbachia and WNV infections, obtaining variable results regarding the directionality of this relationship. In contrast, only a few studies investigate the role of the whole microbiome or other bacterial taxa in WNV infections. These studies suggest that bacteria of the genera Serratia and Enterobacter may enhance WNV development. Thus, due to the relevance of WNV in human and animal health and the important role of mosquitoes of the Cx. pipiens complex in its transmission, more research is needed to unravel the role of mosquito microbiota and those factors affecting this microbiota on pathogen epidemiology. In this respect, we finally propose future lines of research lines on this topic.
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Affiliation(s)
- Marta Garrigós
- Department of Parasitology, University of Granada, 18071 Granada, Spain; (M.G.); (J.V.); (J.M.-d.l.P.)
| | - Mario Garrido
- Department of Parasitology, University of Granada, 18071 Granada, Spain; (M.G.); (J.V.); (J.M.-d.l.P.)
| | - Guillermo Panisse
- CEPAVE—Centro de Estudios Parasitológicos y de Vectores CONICET-UNLP, La Plata 1900, Argentina;
| | - Jesús Veiga
- Department of Parasitology, University of Granada, 18071 Granada, Spain; (M.G.); (J.V.); (J.M.-d.l.P.)
| | - Josué Martínez-de la Puente
- Department of Parasitology, University of Granada, 18071 Granada, Spain; (M.G.); (J.V.); (J.M.-d.l.P.)
- CIBER de Epidemiología y Salud Pública (CIBERESP), 28029 Madrid, Spain
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3
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A Review of Chlamydial Infections in Wild Birds. Pathogens 2021; 10:pathogens10080948. [PMID: 34451412 PMCID: PMC8398480 DOI: 10.3390/pathogens10080948] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Revised: 07/21/2021] [Accepted: 07/22/2021] [Indexed: 12/05/2022] Open
Abstract
The Chlamydia are a globally distributed genus of bacteria that can infect and cause disease in a range of hosts. Birds are the primary host for multiple chlamydial species. The most well-known of these is Chlamydia psittaci, a zoonotic bacterium that has been identified in a range of wild and domesticated birds. Wild birds are often proposed as a reservoir of Chlamydia psittaci and potentially other chlamydial species. The aim of this review is to present the current knowledge of chlamydial infections in wild avian populations. We focus on C. psittaci but also consider other Chlamydiaceae and Chlamydia-related bacteria that have been identified in wild birds. We summarise the diversity, host range, and clinical signs of infection in wild birds and consider the potential implications of these infections for zoonotic transmission and avian conservation. Chlamydial bacteria have been found in more than 70 species of wild birds, with the greatest chlamydial diversity identified in Europe. The Corvidae and Accipitridae families are emerging as significant chlamydial hosts, in addition to established wild hosts such as the Columbidae. Clarifying the effects of these bacteria on avian host fitness and the zoonotic potential of emerging Chlamydiales will help us to understand the implications of these infections for avian and human health.
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Davies YM, Franco LS, Barbosa FB, Vanin CL, Gomes VTM, Moreno LZ, Barbosa MRF, Sato MIZ, Moreno AM, Knöbl T. Use of MALDI-TOF for identification and surveillance of gram-negative bacteria in captive wild psittacines. BRAZ J BIOL 2021; 82:e233523. [PMID: 33787713 DOI: 10.1590/1519-6984.233523] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2020] [Accepted: 08/08/2020] [Indexed: 11/22/2022] Open
Abstract
Microbiological studies of the sanitary and health status of psittacine birds that will be reintroduced is important in evaluating whether these animals act as carriers of pathogenic agents to other animals and humans. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a faster and more accurate method to identify bacteria than conventional microbiology methods. The aim of this study was to evaluate the health status of psittacines housed in captivity, by assessment of Gram-negative bacteria from fecal microbiota through MALDI- TOF MS identification. The results indicate high frequency of Gram-negative bacteria in feces (96.5%), especially from the Enterobacteriaceae family (88.7%). The most prevalent bacteria were Escherichia coli (39.0%), Proteus vulgaris (12.2%), Klebsiella spp. (12.1%) and Raoultella ornithinolytica (8.7%). Proteus hauseri, Citrobacter spp., Morganella morgannii, Providencia rettgeri, Enterobacter spp. and Escherichia hermannii were isolated with lower frequency. . All these agents are potentially pathogenic for parrots and can cause systemic infections in other animals and humans. These findings reinforce that MALDI- TOF MS proved to be a rapid and accurate method of identification of the microorganism and evaluation of the health status of psittacines, providing relevant data to assist decision-making regarding the sanitary protocols in wildlife centers, and possible future reintroduction of wild birds.
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Affiliation(s)
- Y M Davies
- Universidade de São Paulo - USP, Departamento de Patologia da Faculdade de Medicina Veterinária e Zootecnia, São Paulo, SP, Brasil
| | - L S Franco
- Universidade de São Paulo - USP, Departamento de Patologia da Faculdade de Medicina Veterinária e Zootecnia, São Paulo, SP, Brasil
| | - F B Barbosa
- Universidade de São Paulo - USP, Departamento de Patologia da Faculdade de Medicina Veterinária e Zootecnia, São Paulo, SP, Brasil
| | - C L Vanin
- Departamento de Fauna da Secretaria de Infraestrutura e Meio Ambiente do estado de São Paulo, São Paulo, SP, Brasil
| | - V T M Gomes
- Universidade de São Paulo - USP, Departamento de Medicina Veterinária Preventiva e Saúde Animal da Faculdade de Medicina Veterinária e Zootecnia, São Paulo, SP, Brasil
| | - L Z Moreno
- Universidade de São Paulo - USP, Departamento de Medicina Veterinária Preventiva e Saúde Animal da Faculdade de Medicina Veterinária e Zootecnia, São Paulo, SP, Brasil
| | - M R F Barbosa
- Companhia Ambiental do Estado de São Paulo - CETESB, São Paulo, SP, Brasil
| | - M I Z Sato
- Companhia Ambiental do Estado de São Paulo - CETESB, São Paulo, SP, Brasil
| | - A M Moreno
- Universidade de São Paulo - USP, Departamento de Medicina Veterinária Preventiva e Saúde Animal da Faculdade de Medicina Veterinária e Zootecnia, São Paulo, SP, Brasil
| | - T Knöbl
- Universidade de São Paulo - USP, Departamento de Patologia da Faculdade de Medicina Veterinária e Zootecnia, São Paulo, SP, Brasil
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Jose PA, Ben-Yosef M, Lahuatte P, Causton CE, Heimpel GE, Jurkevitch E, Yuval B. Shifting microbiomes complement life stage transitions and diet of the bird parasite Philornis downsi from the Galapagos Islands. Environ Microbiol 2021; 23:5014-5029. [PMID: 33587780 DOI: 10.1111/1462-2920.15435] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2020] [Accepted: 02/12/2021] [Indexed: 01/04/2023]
Abstract
Domestication disconnects an animal from its natural environment and diet, imposing changes in the attendant microbial community. We examine these changes in Philornis downsi (Muscidae), an invasive parasitic fly of land birds in the Galapagos Islands. Using a 16S rDNA profiling approach we studied the microbiome of larvae and adults of wild and laboratory-reared populations. These populations diverged in their microbiomes, significantly more so in larval than in adult flies. In field-collected second-instar larvae, Klebsiella (70.3%) was the most abundant taxon, while in the laboratory Ignatzschineria and Providencia made up 89.2% of the community. In adults, Gilliamella and Dysgonomonas were key members of the core microbiome of field-derived females and males but had no or very low representation in the laboratory. Adult flies harbour sex-specific microbial consortia in their gut, as male core microbiomes were significantly dominated by Klebsiella. Thus, P. downsi microbiomes are dynamic and shift correspondingly with life cycle and diet. Sex-specific foraging behaviour of adult flies and nest conditions, which are absent in the laboratory, may contribute to shaping distinct larval, and adult male and female microbiomes. We discuss these findings in the context of microbe-host co-evolution and the implications for control measures.
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Affiliation(s)
- Polpass Arul Jose
- Faculty of Agriculture Food and Environment, The Hebrew University of Jerusalem, Rehovot, 7612001, Israel
| | - Michael Ben-Yosef
- Department of Entomology, Agricultural Research Organization, Gilat Center, M. P. Negev, 85280, Israel
| | - Paola Lahuatte
- Charles Darwin Research Station, Charles Darwin Foundation, Puerto Ayora, Galapagos, 200350, Ecuador
| | - Charlotte E Causton
- Charles Darwin Research Station, Charles Darwin Foundation, Puerto Ayora, Galapagos, 200350, Ecuador
| | - George E Heimpel
- Department of Entomology, University of Minnesota, 1980 Folwell Avenue, MN, 55108, USA
| | - Edouard Jurkevitch
- Faculty of Agriculture Food and Environment, The Hebrew University of Jerusalem, Rehovot, 7612001, Israel
| | - Boaz Yuval
- Faculty of Agriculture Food and Environment, The Hebrew University of Jerusalem, Rehovot, 7612001, Israel
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Cohen JM, Sauer EL, Santiago O, Spencer S, Rohr JR. Divergent impacts of warming weather on wildlife disease risk across climates. Science 2021; 370:370/6519/eabb1702. [PMID: 33214248 DOI: 10.1126/science.abb1702] [Citation(s) in RCA: 45] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2020] [Accepted: 09/10/2020] [Indexed: 12/31/2022]
Abstract
Disease outbreaks among wildlife have surged in recent decades alongside climate change, although it remains unclear how climate change alters disease dynamics across different geographic regions. We amassed a global, spatiotemporal dataset describing parasite prevalence across 7346 wildlife populations and 2021 host-parasite combinations, compiling local weather and climate records at each location. We found that hosts from cool and warm climates experienced increased disease risk at abnormally warm and cool temperatures, respectively, as predicted by the thermal mismatch hypothesis. This effect was greatest in ectothermic hosts and similar in terrestrial and freshwater systems. Projections based on climate change models indicate that ectothermic wildlife hosts from temperate and tropical zones may experience sharp increases and moderate reductions in disease risk, respectively, though the magnitude of these changes depends on parasite identity.
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Affiliation(s)
- Jeremy M Cohen
- Department of Integrative Biology, University of South Florida, Tampa, FL, USA. .,Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, Madison, WI, USA
| | - Erin L Sauer
- Department of Integrative Biology, University of South Florida, Tampa, FL, USA.,Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, Madison, WI, USA
| | - Olivia Santiago
- Department of Integrative Biology, University of South Florida, Tampa, FL, USA
| | - Samuel Spencer
- Department of Integrative Biology, University of South Florida, Tampa, FL, USA
| | - Jason R Rohr
- Department of Integrative Biology, University of South Florida, Tampa, FL, USA.,Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
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Ahmed HA, Awad NFS, Abd El-Hamid MI, Shaker A, Mohamed RE, Elsohaby I. Pet birds as potential reservoirs of virulent and antibiotic resistant zoonotic bacteria. Comp Immunol Microbiol Infect Dis 2020; 75:101606. [PMID: 33373939 DOI: 10.1016/j.cimid.2020.101606] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2020] [Revised: 11/28/2020] [Accepted: 12/02/2020] [Indexed: 11/30/2022]
Abstract
Bacterial pathogens carried by pet birds are considered a risk for birds, workers, and pet owners. This study investigated the potential of pet birds as reservoirs for virulent multidrug-resistant (MDR) zoonotic bacteria and assessed the genetic relatedness and diversity of bacterial isolates from pet birds and human contacts. Cloacal and tracheal swabs from 125 pet birds and 70 hand swabs from human contacts were collected. The results revealed that the pet birds were reservoirs for Escherichia coli, Klebsiella pneumoniae (17.6 %, each), and Staphylococcus aureus (15.2 %). These isolates were also identified in their human contacts, at percentages of 14.3 %, 12.9 %, and 24.3 %, respectively. Virulence associated genes were identified from E. coli (stx2, stx2f, eaeA, and hlyA), K. pneumoniae (fimH, TraT, and magA), and S. aureus (PVL, hly, sea, sed genes) isolates. Multidrug-resistant E. coli, K. pneumoniae, and S. aureus were highly prevalent (81.3 %, 90.3 %, and 61.1 %, respectively). The genetic relationship between the E. coli and K. pneumoniae isolates from the pet birds and human contacts were determined by ERIC-PCR, while, RAPD-PCR was used for the S. aureus isolates. ERIC-PCR was found to have the highest discriminatory power. The clustering of the isolates from the pet birds and human contacts indicated potential transmission between the birds and workers. In conclusion, pet birds could act as potential reservoirs for zoonotic bacterial pathogens; thus, posing a risk to their human contacts.
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Affiliation(s)
- Heba A Ahmed
- Department of Zoonoses, Faculty of Veterinary Medicine, Zagazig University, Zagazig City 44511, Sharkia Governorate, Egypt.
| | - Naglaa F S Awad
- Department of Avian and Rabbit Medicine, Faculty of Veterinary Medicine, Zagazig University, Zagazig City 44511, Sharkia Governorate, Egypt
| | - Marwa I Abd El-Hamid
- Department of Microbiology, Faculty of Veterinary Medicine, Zagazig University, Zagazig City, 44511, Sharkia Governorate, Egypt
| | - Asmaa Shaker
- Veterinary Hospital, Faculty of Veterinary Medicine, University of Sadat City, Egypt
| | - Rehab E Mohamed
- Department of Zoonoses, Faculty of Veterinary Medicine, Zagazig University, Zagazig City 44511, Sharkia Governorate, Egypt
| | - Ibrahim Elsohaby
- Department of Animal Medicine, Division of Infectious Diseases, Faculty of Veterinary Medicine, Zagazig University, Zagazig City 44511, Sharkia Governorate, Egypt; Department of Health Management, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, C1A 4P3, Canada
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Stokes HS, Martens JM, Jelocnik M, Walder K, Segal Y, Berg ML, Bennett ATD. Chlamydial diversity and predictors of infection in a wild Australian parrot, the Crimson Rosella (Platycercus elegans). Transbound Emerg Dis 2020; 68:487-498. [PMID: 32603529 DOI: 10.1111/tbed.13703] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2019] [Revised: 06/16/2020] [Accepted: 06/22/2020] [Indexed: 12/14/2022]
Abstract
Members of the Chlamydia genus are known to cause disease in both humans and animals. A variety of other species in the order Chlamydiales are increasingly being discovered and emerging as potential pathogens, yet there are scarce data on the diversity, prevalence and impacts of these pathogens in wild birds. To address this gap, we investigated which Chlamydiales species are present in a wild population of a common Australian parrot, the Crimson Rosella (Platycercus elegans). We collected cloacal swabs and serum from 136 individuals in south-eastern Australia, over two years, and tested several predictors of prevalence: age, sex, season and breeding status. We used multiple PCR assays to determine bacterial prevalence in cloacal swabs and a solid-phase ELISA to determine seroprevalence. We found Chlamydiales PCR prevalence of 27.7% (95% CI 20.2, 36.2) and identified at least two families (Chlamydiaceae and Parachlamydiaceae). Regarding known chlamydial avian pathogens, we found C. psittaci at 6.2% (95% CI 2.7, 11.8) and C. gallinacea at 4.6% (95% CI 1.7, 9.8) prevalence. We also identified at least two potentially novel Chlamydiales species, of unknown pathogenicity. Sex and breeding status predicted Chlamydiales PCR prevalence, with females more likely to be infected than males, and non-breeding birds more likely to be infected than breeding birds. Seroprevalence was 16% (95% CI 8.8, 25.9). Season and breeding status were strong predictors of seroprevalence, with highest seroprevalence in autumn and in non-breeding birds. Our results reveal a diversity of Chlamydiales species in this abundant wild host, and indicate that host-specific and temporal factors are associated with infection risk. Our findings suggest that wild parrots are a reservoir of both known and novel Chlamydiales lineages, of zoonotic and pathogenic potential.
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Affiliation(s)
- Helena S Stokes
- Centre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Waurn Ponds, VIC, Australia
| | - Johanne M Martens
- Centre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Waurn Ponds, VIC, Australia
| | - Martina Jelocnik
- Genecology Research Centre, University of the Sunshine Coast, Sippy Downs, QLD, Australia
| | - Ken Walder
- Centre for Molecular and Medical Research, School of Medicine, Deakin University, Waurn Ponds, VIC, Australia
| | - Yonatan Segal
- Department of Jobs, Precincts and Regions, Attwood, VIC, Australia
| | - Mathew L Berg
- Centre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Waurn Ponds, VIC, Australia
| | - Andrew T D Bennett
- Centre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Waurn Ponds, VIC, Australia
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Machado DN, Lopes ES, Albuquerque AH, Horn RV, Bezerra WGA, Siqueira RAS, Lopes IT, Nunes FP, Teixeira RSC, Cardoso WM. Isolation and Antimicrobial Resistance Profiles of Enterobacteria from Nestling Grey-Breasted Parakeets (Pyrrhura Griseipectus). BRAZILIAN JOURNAL OF POULTRY SCIENCE 2018. [DOI: 10.1590/1806-9061-2017-0551] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Affiliation(s)
| | - ES Lopes
- Universidade Estadual do Ceará, Brazil
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