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For: Pauli I, Caceres RA, de Azevedo WF. Molecular modeling and dynamics studies of Shikimate Kinase from Bacillus anthracis. Bioorg Med Chem 2008;16:8098-108. [PMID: 18706819 DOI: 10.1016/j.bmc.2008.07.051] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2008] [Revised: 07/17/2008] [Accepted: 07/19/2008] [Indexed: 11/16/2022]
Number Cited by Other Article(s)
1
Favela-Candia A, Téllez-Valencia A, Campos-Almazán M, Sierra-Campos E, Valdez-Solana M, Oria-Hernández J, Castillo-Villanueva A, Nájera H, Avitia-Domínguez C. Biochemical, Kinetic, and Computational Structural Characterization of Shikimate Kinase from Methicillin-Resistant Staphylococcus aureus. Mol Biotechnol 2019;61:274-285. [PMID: 30747382 DOI: 10.1007/s12033-019-00159-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
2
Bitencourt-Ferreira G, Veit-Acosta M, de Azevedo WF. Electrostatic Energy in Protein-Ligand Complexes. Methods Mol Biol 2019;2053:67-77. [PMID: 31452099 DOI: 10.1007/978-1-4939-9752-7_5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
3
Bitencourt-Ferreira G, Veit-Acosta M, de Azevedo WF. Van der Waals Potential in Protein Complexes. Methods Mol Biol 2019;2053:79-91. [PMID: 31452100 DOI: 10.1007/978-1-4939-9752-7_6] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
4
Bitencourt-Ferreira G, Veit-Acosta M, de Azevedo WF. Hydrogen Bonds in Protein-Ligand Complexes. Methods Mol Biol 2019;2053:93-107. [PMID: 31452101 DOI: 10.1007/978-1-4939-9752-7_7] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
5
Saeidian H, Faraz SM, Mirjafary Z, Babri M. Harmony of computational quantum chemistry and experimental chemistry: Comprehensive DFT studies, microsynthesis, and characterization of mustard gas polysulfide analogues. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.01.067] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
6
Raja Singh S, Prakash S, Muneeswaran G, Rajesh S, Muthukumar K, Vasu V, Karunakaran C. Molecular dynamics simulation studies on structural and conformational changes in tyrosine-67 nitrated cytochromec. MOLECULAR SIMULATION 2012. [DOI: 10.1080/08927022.2011.645597] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
7
Kandeel M, Kitade Y. Binding dynamics and energetic insight into the molecular forces driving nucleotide binding by guanylate kinase. J Mol Recognit 2010;24:322-32. [PMID: 21360614 DOI: 10.1002/jmr.1074] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2010] [Revised: 07/16/2010] [Accepted: 07/16/2010] [Indexed: 11/11/2022]
8
Insilico studies on anthrax lethal factor inhibitors: pharmacophore modeling and virtual screening approaches towards designing of novel inhibitors for a killer. J Mol Graph Model 2010;29:256-65. [PMID: 20727800 DOI: 10.1016/j.jmgm.2010.07.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2009] [Revised: 06/30/2010] [Accepted: 07/06/2010] [Indexed: 11/21/2022]
9
Pauli I, Macedo Timmers LFS, Andrade Caceres R, Augusto Basso L, Santiago Santos D, Filgueira de Azevedo Jr. W. Molecular modeling and dynamics studies of purine nucleoside phosphorylase from Bacteroides fragilis. J Mol Model 2009;15:913-22. [DOI: 10.1007/s00894-008-0445-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2008] [Accepted: 12/08/2008] [Indexed: 10/21/2022]
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