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Roberto Tavolari Jortieke C, Rocha Joaquim A, Fumagalli F. Advances in antibacterial agents for Mycobacterium fortuitum. RSC Med Chem 2024:d4md00508b. [PMID: 39493226 PMCID: PMC11528911 DOI: 10.1039/d4md00508b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2024] [Accepted: 10/16/2024] [Indexed: 11/05/2024] Open
Abstract
Mycobacterium fortuitum is an emerging human pathogen, characterized by an increase in prevalence and antibacterial resistance over the years, highlighting the need for the development of new drugs against this rapidly growing nontuberculous mycobacterium (NTM). To support this crusade, this review summarizes findings from the past two decades concerning compounds with antimycobacterial activity against M. fortuitum. It identifies the most promising and effective chemical frameworks to inspire the development of new therapeutic alternatives for infections caused by this microorganism. Most compounds effective against M. fortuitum are synthetic, with macozinone, featuring a 2-piperazine-benzothiazinone framework, standing out as a notable drug candidate. Among natural products, the polyphenolic polyketide clostrubin and the sansanmycin peptide analogs have shown efficacy against this NTM. Some compounds' mechanisms of action on M. fortuitum have been studied, including NITD-916, which acts as an enoyl-acyl carrier protein reductase inhibitor, and TBAJ-5307, which inhibits F-ATP synthase. Moreover, this review discusses the pathogenic molecular mechanisms and potential therapeutic targets within this mycobacterium.
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Affiliation(s)
| | - Angélica Rocha Joaquim
- Department of Pharmacy, Health Sciences Centre, Federal University of Santa Maria Santa Maria RS Brazil +55 (55) 3220 9372
| | - Fernando Fumagalli
- Department of Pharmacy, Health Sciences Centre, Federal University of Santa Maria Santa Maria RS Brazil +55 (55) 3220 9372
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Santos-Júnior PFDS, Batista VDM, Nascimento IJDS, Nunes IC, Silva LR, Costa CACB, Freitas JDD, Quintans-Júnior LJ, Araújo-Júnior JXD, Freitas MEGD, Zhan P, Green KD, Garneau-Tsodikova S, Mendonça-Júnior FJB, Rodrigues-Junior VS, Silva-Júnior EFD. A consensus reverse docking approach for identification of a competitive inhibitor of acetyltransferase enhanced intracellular survival protein from Mycobacterium tuberculosis. Bioorg Med Chem 2024; 108:117774. [PMID: 38833750 DOI: 10.1016/j.bmc.2024.117774] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2024] [Revised: 05/08/2024] [Accepted: 05/24/2024] [Indexed: 06/06/2024]
Abstract
Tuberculosis (TB) is an infectious disease caused by Mycobacterium tuberculosis (Mtb), which remains a significant global health challenge. The emergence of multidrug-resistant (MDR) Mtb strains imposes the development of new therapeutic strategies. This study focuses on the identification and evaluation of potential inhibitors against Mtb H37Ra through a comprehensive screening of an in-house chemolibrary. Subsequently, a promising pyrimidine derivative (LQM495) was identified as promising and then further investigated by experimental and in silico approaches. In this context, computational techniques were used to elucidate the potential molecular target underlying the inhibitory action of LQM495. Then, a consensus reverse docking (CRD) protocol was used to investigate the interactions between this compound and several Mtb targets. Out of 98 Mtb targets investigated, the enhanced intracellular survival (Eis) protein emerged as a target for LQM495. To gain insights into the stability of the LQM495-Eis complex, molecular dynamics (MD) simulations were conducted over a 400 ns trajectory. Further insights into its binding modes within the Eis binding site were obtained through a Quantum mechanics (QM) approach, using density functional theory (DFT), with B3LYP/D3 basis set. These calculations shed light on the electronic properties and reactivity of LQM495. Subsequently, inhibition assays and kinetic studies of the Eis activity were used to investigate the activity of LQM495. Then, an IC50 value of 11.0 ± 1.4 µM was found for LQM495 upon Eis protein. Additionally, its Vmax, Km, and Ki parameters indicated that it is a competitive inhibitor. Lastly, this study presents LQM495 as a promising inhibitor of Mtb Eis protein, which could be further explored for developing novel anti-TB drugs in the future.
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Affiliation(s)
| | - Vitoria de Melo Batista
- Research Group of Biological and Molecular Chemistry, Institute of Chemistry and Biotechnology, Federal University of Alagoas, Lourival Melo Mota Avenue, AC. Simões campus, 57072-970 Alagoas, Maceió, Brazil
| | - Igor José Dos Santos Nascimento
- Post-Graduation Program of Pharmaceutical Sciences, Pharmacy Department, State University of Paraíba, Campina Grande, Brazil
| | - Isabelle Cavalcante Nunes
- Research Group of Biological and Molecular Chemistry, Institute of Chemistry and Biotechnology, Federal University of Alagoas, Lourival Melo Mota Avenue, AC. Simões campus, 57072-970 Alagoas, Maceió, Brazil
| | - Leandro Rocha Silva
- Research Group of Biological and Molecular Chemistry, Institute of Chemistry and Biotechnology, Federal University of Alagoas, Lourival Melo Mota Avenue, AC. Simões campus, 57072-970 Alagoas, Maceió, Brazil
| | | | - Johnnatan Duarte de Freitas
- Department of Chemistry, Federal Institute of Alagoas, Maceió campus, Mizael Domingues Street, 57020-600 Maceió, Alagoas, Brazil
| | - Lucindo José Quintans-Júnior
- Pharmaceutical Sciences Graduate Program (PPGCS), Federal University of Sergipe, São Cristóvão, Sergipe 49100-001, Brazil
| | - João Xavier de Araújo-Júnior
- Laboratory of Medicinal Chemistry, Institute of Pharmaceutical Sciences, Federal University of Alagoas, Lourival Melo Mota Avenue, AC. Simões campus, 57072-970 Alagoas, Maceió, Brazil
| | | | - Peng Zhan
- Department of Medicinal Chemistry, Key Laboratory of Chemical Biology (Ministry of Education), School of Pharmaceutical Sciences, Cheeloo College of Medicine, Shandong University, 44 West Culture Road, 250012 Jinan, Shandong, PR China
| | - Keith D Green
- Department of Pharmaceutical Sciences, University of Kentucky, Lexington, KY, 40536-0596, United States
| | - Sylvie Garneau-Tsodikova
- Department of Pharmaceutical Sciences, University of Kentucky, Lexington, KY, 40536-0596, United States
| | | | - Valnês S Rodrigues-Junior
- Department of Pharmaceutical Sciences, Federal University of Paraíba, João Pessoa, Brazil; Post-Graduation Program in Natural Products and Bioactive Synthetics, Federal University of Paraíba, João Pessoa, Brazil
| | - Edeildo Ferreira da Silva-Júnior
- Research Group of Biological and Molecular Chemistry, Institute of Chemistry and Biotechnology, Federal University of Alagoas, Lourival Melo Mota Avenue, AC. Simões campus, 57072-970 Alagoas, Maceió, Brazil.
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Sai M, Mizuno T. Potassium base-catalyzed redox isomerization of propargylic alcohols to chalcones. SYNTHETIC COMMUN 2023. [DOI: 10.1080/00397911.2022.2152695] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Affiliation(s)
- Masahiro Sai
- Department of Chemistry and Biomolecular Science, Faculty of Engineering, Gifu University, Gifu, Japan
| | - Takatoki Mizuno
- Department of Chemistry and Biomolecular Science, Faculty of Engineering, Gifu University, Gifu, Japan
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Fernandes RA, Gangani AJ, Kunkalkar RA. Metal-free annulative hydrosulfonation of propiolate esters: synthesis of 4-sulfonates of coumarins and butenolides. NEW J CHEM 2020. [DOI: 10.1039/c9nj06438a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
An efficient metal-free and cost-effective method for the synthesis of coumarin and butenolide 4-sulfonates has been developed involving addition of sulfonic acids to ethyl propiolates followed by lactonization.
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Affiliation(s)
- Rodney A. Fernandes
- Department of Chemistry
- Indian Institute of Technology Bombay
- Mumbai 400076
- India
| | - Ashvin J. Gangani
- Department of Chemistry
- Indian Institute of Technology Bombay
- Mumbai 400076
- India
| | - Rupesh A. Kunkalkar
- Department of Chemistry
- Indian Institute of Technology Bombay
- Mumbai 400076
- India
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Neuhaus JD, Bauer A, Pinto A, Maulide N. A Catalytic Cross-Olefination of Diazo Compounds with Sulfoxonium Ylides. Angew Chem Int Ed Engl 2018; 57:16215-16218. [PMID: 30264529 PMCID: PMC6283242 DOI: 10.1002/anie.201809934] [Citation(s) in RCA: 74] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2018] [Indexed: 12/31/2022]
Abstract
A ruthenium‐catalysed cross‐olefination of diazo compounds and sulfoxonium ylides is presented. Our reaction design exploits the intrinsic difference in reactivity of diazo compounds and sulfoxonium ylides as both carbene precursors and nucleophiles, which results in a highly selective reaction.
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Affiliation(s)
- James D Neuhaus
- Institute of Organic Chemistry, University of Vienna, Währinger Straße 38, 1090, Vienna, Austria
| | - Adriano Bauer
- Institute of Organic Chemistry, University of Vienna, Währinger Straße 38, 1090, Vienna, Austria
| | - Alexandre Pinto
- Institute of Organic Chemistry, University of Vienna, Währinger Straße 38, 1090, Vienna, Austria
| | - Nuno Maulide
- Institute of Organic Chemistry, University of Vienna, Währinger Straße 38, 1090, Vienna, Austria
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Neuhaus JD, Bauer A, Pinto A, Maulide N. Eine katalytische Kreuz‐Olefinierung von Diazoverbindungen mit Sulfoxonium‐Yliden. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201809934] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- James D. Neuhaus
- Institut für Organische ChemieUniversität Wien Währinger Straße 38 1090 Wien Österreich
| | - Adriano Bauer
- Institut für Organische ChemieUniversität Wien Währinger Straße 38 1090 Wien Österreich
| | - Alexandre Pinto
- Institut für Organische ChemieUniversität Wien Währinger Straße 38 1090 Wien Österreich
| | - Nuno Maulide
- Institut für Organische ChemieUniversität Wien Währinger Straße 38 1090 Wien Österreich
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Singh R, Thopate Y, Equbal D, Sinha AK. Synergistic Cooperative Effect of L-Arginine-[bmim]Br in Cascade Decarboxylative Knoevenagel-Thia-Michael Addition Reactions: Green Approach Towards C−S Bond Formation with In Situ Generated Unactivated α,β-Unsaturated Ester. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201801150] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Richa Singh
- Medicinal & Process Chemistry Division; CSIR-Central Drug Research Institute, Sector 10, Jankipuram Extension; Sitapur Road Lucknow 226031 India
| | - Yogesh Thopate
- Medicinal & Process Chemistry Division; CSIR-Central Drug Research Institute, Sector 10, Jankipuram Extension; Sitapur Road Lucknow 226031 India
- Academy of Scientific and Innovative Research; New Delhi 110001 India
| | - Danish Equbal
- Medicinal & Process Chemistry Division; CSIR-Central Drug Research Institute, Sector 10, Jankipuram Extension; Sitapur Road Lucknow 226031 India
| | - Arun K. Sinha
- Medicinal & Process Chemistry Division; CSIR-Central Drug Research Institute, Sector 10, Jankipuram Extension; Sitapur Road Lucknow 226031 India
- Academy of Scientific and Innovative Research; New Delhi 110001 India
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Hamada Y, Kawasaki-Takasuka T, Yamazaki T. Base-promoted isomerization of CF 3-containing allylic alcohols to the corresponding saturated ketones under metal-free conditions. Beilstein J Org Chem 2017; 13:1507-1512. [PMID: 28845194 PMCID: PMC5550803 DOI: 10.3762/bjoc.13.149] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2017] [Accepted: 07/09/2017] [Indexed: 11/23/2022] Open
Abstract
Following to the computational expectation, our previously reported intriguing 1,3-proton shift of 4,4,4-trifluorobut-2-yn-1-ols was successfully extended to the 4,4,4-trifluorobut-2-en-1-ol system under metal-free conditions to afford the corresponding saturated ketones in high to excellent chemical yields using such a convenient and easy-to-handle base as DBU at the toluene refluxing temperature, and utilization of the corresponding optically active substrates unambiguously demonstrated that this transformation proceeded in a highly stereoselective fashion.
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Affiliation(s)
- Yoko Hamada
- Division of Applied Chemistry, Institute of Engineering, Tokyo University of Agriculture and Technology, 2-24-16 Nakamachi, Koganei 184-8588, Japan
| | - Tomoko Kawasaki-Takasuka
- Division of Applied Chemistry, Institute of Engineering, Tokyo University of Agriculture and Technology, 2-24-16 Nakamachi, Koganei 184-8588, Japan
| | - Takashi Yamazaki
- Division of Applied Chemistry, Institute of Engineering, Tokyo University of Agriculture and Technology, 2-24-16 Nakamachi, Koganei 184-8588, Japan
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Sivák I, Václav J, Berkeš D, Kolarovič A. Straightforward synthesis of functionalized (E)-3-acylacrylic acids. Tetrahedron 2015. [DOI: 10.1016/j.tet.2015.10.003] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Goyal AK, Garg T, Rath G, Gupta UD, Gupta P. Development and Characterization of Nanoembedded Microparticles for Pulmonary Delivery of Antitubercular Drugs against Experimental Tuberculosis. Mol Pharm 2015; 12:3839-50. [PMID: 26436948 DOI: 10.1021/acs.molpharmaceut.5b00016] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The foremost objective of the present research study was to develop and evaluate the potential of rifampicin (RIF) and isoniazid (INH) loaded spray dried nanoembedded microparticles against experimental tuberculosis (TB). In this study, RIF-INH loaded various formulations (chitosan, guar gum, mannan, and guar gum coated chitosan) were prepared by spray drying and characterized on the basis of in vitro as well as in vivo studies. Results showed that guar gum spray dried particles showed uniform size distribution with smooth surface as compare to mannan formulations. Guar gum batches exhibited excellent flow ability attributed to their optimum moisture content and uniform size distribution. The drug release showed the biphasic pattern of release, i.e., initial burst followed by a sustained release pattern. The preferential uptake of guar gum coated formulations suggested the presence and selective uptake capability of mannose moiety to the specific cell surface of macrophages. In vivo lung distribution study showed that guar gum coated chitosan (GCNP) batches demonstrated prolonged residence at the target site and thereby improve the therapeutic utility of drug with a significant reduction in systemic toxicity. Optimized drug loaded GCNP formulation has resulted in almost 5-fold reduction of the number of bacilli as compared to control group. Histopathology study also demonstrated that none of the treated groups show any evidence of lung tissue abnormality. Hence, GCNPs could be a promising carrier for selective delivery of antitubercular drugs to alveolar macrophages with the interception of minimal side effects, for efficient management of TB.
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Affiliation(s)
- Amit Kumar Goyal
- Nanomedicine Research Centre, Department of Pharmaceutics, ISF College of Pharmacy , Moga, Punjab, India
| | - Tarun Garg
- Nanomedicine Research Centre, Department of Pharmaceutics, ISF College of Pharmacy , Moga, Punjab, India.,Punjab Technical University , Kapurthala, Punjab, India
| | - Goutam Rath
- Nanomedicine Research Centre, Department of Pharmaceutics, ISF College of Pharmacy , Moga, Punjab, India.,Punjab Technical University , Kapurthala, Punjab, India
| | - Umesh Datta Gupta
- National Jalma Institute for Leprosy and Other Mycobacterial Diseases , Agra, Uttar Pradesh, India
| | - Pushpa Gupta
- National Jalma Institute for Leprosy and Other Mycobacterial Diseases , Agra, Uttar Pradesh, India
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Garg T, Goyal AK, Rath G, Murthy RSR. Spray-dried particles as pulmonary delivery system of anti-tubercular drugs: design, optimization, in vitro and in vivo evaluation. Pharm Dev Technol 2015; 21:951-960. [DOI: 10.3109/10837450.2015.1081613] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Affiliation(s)
- Tarun Garg
- Department of Pharmaceutics, ISF College of Pharmacy, Nanomedicine Research Centre, Moga, Punjab, India, affiliated from Punjab Technical University, Kapurthala, Punjab, India
| | - Amit K. Goyal
- Department of Pharmaceutics, ISF College of Pharmacy, Nanomedicine Research Centre, Moga, Punjab, India, affiliated from Punjab Technical University, Kapurthala, Punjab, India
| | - Goutam Rath
- Department of Pharmaceutics, ISF College of Pharmacy, Nanomedicine Research Centre, Moga, Punjab, India, affiliated from Punjab Technical University, Kapurthala, Punjab, India
| | - R. S. R. Murthy
- Department of Pharmaceutics, ISF College of Pharmacy, Nanomedicine Research Centre, Moga, Punjab, India, affiliated from Punjab Technical University, Kapurthala, Punjab, India
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