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Liu SJ, Mao Q, Zhan G, Qin R, Chen BH, Xue J, Luo ML, Zhao Q, Han B. Stereoselective synthesis of trifluoroethyl 3,2'-spirooxindole γ-lactam through the organocatalytic cascade reaction of 3-((2,2,2-trifluoroethyl)amino)indolin-2-one. Org Biomol Chem 2021; 19:467-475. [PMID: 33347527 DOI: 10.1039/d0ob02166k] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Newly designed 3-((2,2,2-trifluoroethyl)amino)indolin-2-ones were used for the facile synthesis of chiral fluoroalkyl-containing 3,2'-spirooxindole γ-lactam products. The secondary amine-catalysed Michael/hemiaminalization cascade reaction of 3-((2,2,2-trifluoroethyl)amino)indolin-2-one with α,β-unsaturated aldehydes followed by oxidation can easily produce the desired products in high yields (up to 86%) with excellent enantioselectivities (up to 99% ee) and diastereoselectivities (up to >95 : 5 dr).
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Affiliation(s)
- Shuai-Jiang Liu
- School of Basic Medical Sciences, School of Pharmacy, State Key Laboratory of Southwestern Chinese Medicine Resources, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
| | - Qing Mao
- School of Basic Medical Sciences, School of Pharmacy, State Key Laboratory of Southwestern Chinese Medicine Resources, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
| | - Gu Zhan
- School of Basic Medical Sciences, School of Pharmacy, State Key Laboratory of Southwestern Chinese Medicine Resources, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
| | - Rui Qin
- School of Basic Medical Sciences, School of Pharmacy, State Key Laboratory of Southwestern Chinese Medicine Resources, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
| | - Ben-Hong Chen
- School of Basic Medical Sciences, School of Pharmacy, State Key Laboratory of Southwestern Chinese Medicine Resources, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
| | - Jing Xue
- School of Basic Medical Sciences, School of Pharmacy, State Key Laboratory of Southwestern Chinese Medicine Resources, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
| | - Meng-Lan Luo
- School of Basic Medical Sciences, School of Pharmacy, State Key Laboratory of Southwestern Chinese Medicine Resources, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
| | - Qian Zhao
- School of Basic Medical Sciences, School of Pharmacy, State Key Laboratory of Southwestern Chinese Medicine Resources, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
| | - Bo Han
- School of Basic Medical Sciences, School of Pharmacy, State Key Laboratory of Southwestern Chinese Medicine Resources, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China.
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2
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Bonandi E, Perdicchia D, Colombo E, Foschi F, Marzullo P, Passarella D. Catalytic C3 aza-alkylation of indoles. Org Biomol Chem 2020; 18:6211-6235. [DOI: 10.1039/d0ob01094d] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
The aza-alkylation reaction at position 3 of the indole scaffold allows the introduction of a differently substituted aminomethyl group, with the formation of a stereogenic centre. Critical summary of 2000–2019 meaningful papers.
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Affiliation(s)
- Elisa Bonandi
- Department of Chemistry
- Università degli Studi di Milano
- Milan
- Italy
| | - Dario Perdicchia
- Department of Chemistry
- Università degli Studi di Milano
- Milan
- Italy
| | - Eleonora Colombo
- Department of Chemistry
- Università degli Studi di Milano
- Milan
- Italy
| | - Francesca Foschi
- Department of Chemistry
- Università degli Studi di Milano
- Milan
- Italy
| | - Paola Marzullo
- Department of Chemistry
- Università degli Studi di Milano
- Milan
- Italy
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3
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Flagstad T, Azevedo CMG, Troelsen NS, Min GK, Macé Y, Willaume A, Guilleux R, Velay M, Bonnet K, Morgentin R, Nielsen TE, Clausen MH. Generation of a Heteropolycyclic and sp3
-Rich Scaffold for Library Synthesis from a Highly Diastereoselective Petasis/Diels-Alder and ROM-RCM Reaction Sequence. European J Org Chem 2018. [DOI: 10.1002/ejoc.201801551] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Thomas Flagstad
- Center for Nanomedicine & Theranostics; Department of Chemistry; Technical University of Denmark; Kemitorvet 207 DK-2800 Kongens Lyngby Denmark
| | - Carlos M. G. Azevedo
- Center for Nanomedicine & Theranostics; Department of Chemistry; Technical University of Denmark; Kemitorvet 207 DK-2800 Kongens Lyngby Denmark
| | - Nikolaj S. Troelsen
- Center for Nanomedicine & Theranostics; Department of Chemistry; Technical University of Denmark; Kemitorvet 207 DK-2800 Kongens Lyngby Denmark
| | - Geanna K. Min
- Center for Nanomedicine & Theranostics; Department of Chemistry; Technical University of Denmark; Kemitorvet 207 DK-2800 Kongens Lyngby Denmark
| | - Yohan Macé
- EDELRIS; 115 Avenue Lacassagne F-69003 France
| | | | | | | | | | | | - Thomas E. Nielsen
- Singapore Centre on Environmental Life Science Engineering; Nanyang Technological University; 637551 Singapore Singapore
- Costerton Biofilm Center; Department of Immunology and Microbiology; University of Copenhagen; DK-2200 Copenhagen DK Denmark
| | - Mads H. Clausen
- Center for Nanomedicine & Theranostics; Department of Chemistry; Technical University of Denmark; Kemitorvet 207 DK-2800 Kongens Lyngby Denmark
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4
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Affiliation(s)
- Marta Meazza
- Faculty of Natural and Environmental Sciences; University of Southampton; University Road SO17 1BJ UK
| | - Xavier Companyó
- Dipartimento di Scienze Chimiche; University of Padua; via Marzolo 1 35131 Padua Italy
| | - Ramon Rios
- Faculty of Natural and Environmental Sciences; University of Southampton; University Road SO17 1BJ UK
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5
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Ishoey M, Petersen RG, Petersen MÅ, Wu P, Clausen MH, Nielsen TE. Diastereoselective synthesis of novel heterocyclic scaffolds through tandem Petasis 3-component/intramolecular Diels-Alder and ROM-RCM reactions. Chem Commun (Camb) 2018; 53:9410-9413. [PMID: 28714998 DOI: 10.1039/c7cc02948a] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
A high-yielding, stereoselective and extraordinarily complexity-generating Petasis 3-component/intramolecular Diels-Alder reaction has been developed. In combination with ROM-RCM, rapid access to complex sp3-rich heterocyclic scaffolds amenable to subsequent functionalization and library synthesis is provided.
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Affiliation(s)
- Mette Ishoey
- Department of Chemistry, Technical University of Denmark, DK-2800 Kgs. Lyngby, Denmark.
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6
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Karawajczyk A, Orrling KM, de Vlieger JSB, Rijnders T, Tzalis D. The European Lead Factory: A Blueprint for Public-Private Partnerships in Early Drug Discovery. Front Med (Lausanne) 2017; 3:75. [PMID: 28154815 PMCID: PMC5243859 DOI: 10.3389/fmed.2016.00075] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2016] [Accepted: 12/23/2016] [Indexed: 11/17/2022] Open
Abstract
The European Lead Factory (ELF) is a public–private partnership (PPP) that provides researchers in Europe with a unique platform for translation of innovative biology and chemistry into high-quality starting points for drug discovery. It combines an exceptional collection of small molecules, high-throughput screening (HTS) infrastructure, and hit follow-up capabilities to advance research projects from both private companies and publicly funded researchers. By active interactions with the wider European life science community, ELF connects and unites bright ideas, talent, and experience from several disciplines. As a result, ELF is a unique, collaborative lead generation engine that has so far resulted in >4,500 hit compounds with a defined biological activity from 83 successfully completed HTS and hit evaluation campaigns. The PPP has also produced more than 120,000 novel innovative library compounds that complement the 327,000 compounds contributed by the participating pharmaceutical companies. Intrinsic to its setup, ELF enables breakthroughs in areas with unmet medical and societal needs, where no individual entity would be able to create a comparable impact in such a short time.
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Foley DJ, Nelson A, Marsden SP. Evaluating New Chemistry to Drive Molecular Discovery: Fit for Purpose? Angew Chem Int Ed Engl 2016; 55:13650-13657. [PMID: 27573303 PMCID: PMC5113762 DOI: 10.1002/anie.201604193] [Citation(s) in RCA: 57] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2016] [Revised: 06/01/2016] [Indexed: 12/12/2022]
Abstract
As our understanding of the impact of specific molecular properties on applications in discovery-based disciplines improves, the extent to which published synthetic methods meet (or do not meet) desirable criteria is ever clearer. Herein, we show how the application of simple (and in many cases freely available) computational tools can be used to develop a semiquantitative understanding of the potential of new methods to support molecular discovery. This analysis can, among other things, inform the design of improved substrate scoping studies; direct the prioritization of specific exemplar structures for synthesis; and substantiate claims of potential future applications for new methods.
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Affiliation(s)
- Daniel J Foley
- School of Chemistry, University of Leeds, Leeds, LS2 9JT, UK
- Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK
| | - Adam Nelson
- School of Chemistry, University of Leeds, Leeds, LS2 9JT, UK.
- Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.
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8
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Evaluierung neuer Reaktionen zur Steuerung der Wirkstoff-Forschung: ein Eignungstest. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201604193] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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9
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Wu P, Petersen MÅ, Cohrt AE, Petersen R, Morgentin R, Lemoine H, Roche C, Willaume A, Clausen MH, Nielsen TE. A metal-catalyzed enyne-cyclization step for the synthesis of bi- and tricyclic scaffolds amenable to molecular library production. Org Biomol Chem 2016; 14:6947-50. [PMID: 27356738 DOI: 10.1039/c6ob01148a] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A facile metal-catalyzed diversification step for the synthesis of novel bi- and tricyclic scaffolds from enyne substrates is reported in this study. From a single starting material, topologically diverse scaffolds for library synthesis can be generated and decorated in a few steps. The methodology was used to produce a library of 490 compounds within the European Lead Factory (ELF) Consortium.
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Affiliation(s)
- Peng Wu
- Department of Chemistry, Technical University of Denmark, DK-2800, Kgs. Lyngby, Denmark.
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10
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Wu P, Petersen MÅ, Petersen R, Flagstad T, Guilleux R, Ohsten M, Morgentin R, Nielsen TE, Clausen MH. Tandem Mannich/Diels–Alder reactions for the synthesis of indole compound libraries. RSC Adv 2016. [DOI: 10.1039/c6ra08786h] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
A core scaffold for screening library production was synthesized in just four steps using a tandem Mannich/Diels–Alder sequence.
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Affiliation(s)
- Peng Wu
- Department of Chemistry
- Technical University of Denmark
- Kgs. Lyngby
- Denmark
| | | | - Rico Petersen
- Department of Chemistry
- Technical University of Denmark
- Kgs. Lyngby
- Denmark
| | - Thomas Flagstad
- Department of Chemistry
- Technical University of Denmark
- Kgs. Lyngby
- Denmark
| | | | | | | | - Thomas E. Nielsen
- Department of Chemistry
- Technical University of Denmark
- Kgs. Lyngby
- Denmark
- Singapore Centre on Environmental Life Science Engineering
| | - Mads H. Clausen
- Department of Chemistry
- Technical University of Denmark
- Kgs. Lyngby
- Denmark
- Center for Nanomedicine and Theranostics
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11
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Karawajczyk A, Giordanetto F, Benningshof J, Hamza D, Kalliokoski T, Pouwer K, Morgentin R, Nelson A, Müller G, Piechot A, Tzalis D. Expansion of chemical space for collaborative lead generation and drug discovery: the European Lead Factory Perspective. Drug Discov Today 2015; 20:1310-6. [PMID: 26429298 DOI: 10.1016/j.drudis.2015.09.009] [Citation(s) in RCA: 71] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2015] [Revised: 09/02/2015] [Accepted: 09/11/2015] [Indexed: 01/06/2023]
Abstract
High-throughput screening (HTS) represents a major cornerstone of drug discovery. The availability of an innovative, relevant and high-quality compound collection to be screened often dictates the final fate of a drug discovery campaign. Given that the chemical space to be sampled in research programs is practically infinite and sparsely populated, significant efforts and resources need to be invested in the generation and maintenance of a competitive compound collection. The European Lead Factory (ELF) project is addressing this challenge by leveraging the diverse experience and know-how of academic groups and small and medium enterprises (SMEs) engaged in synthetic and/or medicinal chemistry. Here, we describe the novelty, diversity, structural complexity, physicochemical characteristics and overall attractiveness of this first batch of ELF compounds for HTS purposes.
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Affiliation(s)
- Anna Karawajczyk
- Taros Chemicals GmbH & Co. KG, Emil-Figge-Str. 76a, 44227 Dortmund, Germany
| | | | | | - Daniel Hamza
- Sygnature Discovery, BioCity, Nottingham NG1 1GF, UK
| | - Tuomo Kalliokoski
- Lead Discovery Center GmbH, Otto-Hahn-Strabe 15, 44227 Dortmund, Germany
| | - Kees Pouwer
- Syncom BV, Kadijk 3, 9747 AT Groningen, The Netherlands
| | | | - Adam Nelson
- School of Chemistry, University of Leeds, Leeds LS2 9JT, UK; Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK
| | - Gerhard Müller
- Mercachem, Kerkenbos 1013, 6546 BB Nijmegen, The Netherlands
| | - Alexander Piechot
- Taros Chemicals GmbH & Co. KG, Emil-Figge-Str. 76a, 44227 Dortmund, Germany
| | - Dimitrios Tzalis
- Taros Chemicals GmbH & Co. KG, Emil-Figge-Str. 76a, 44227 Dortmund, Germany.
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12
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Wu P, Petersen MÅ, Petersen R, Rasmussen MO, Bonnet K, Nielsen TE, Clausen MH. Synthesis of (Arylamido)pyrrolidinone Libraries through Ritter-Type Cascade Reactions of Dihydroxylactams. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500712] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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