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Abaid K, Erb W, Virieux D, Picot L, Musnier B, Thiéry V, Roisnel T, Mongin F, Touil S. Bisphosphonylallenes as Suitable Scaffolds for Unprecedented 4,5-Diphosphonyldihydropyridazines and 3,4-Diphosphonylpyrroles Displaying Antimelanoma Activity. ACS OMEGA 2022; 7:38894-38901. [PMID: 36340097 PMCID: PMC9631903 DOI: 10.1021/acsomega.2c04619] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/21/2022] [Accepted: 10/05/2022] [Indexed: 06/16/2023]
Abstract
An efficient and simple approach has been developed for the synthesis of unprecedented 4,5-diphosphonyldihydropyridazines and 3,4-diphosphonylpyrroles, through the condensation of bisphosphonylallenes with hydrazines and primary amines, respectively. The reactions proceed under operationally simple, mild, and catalyst-free conditions, for a wide substrate scope. The synthesized compounds were screened for their antiproliferative activity against melanoma cancer cells, and they showed promising growth inhibition.
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Affiliation(s)
- Kmar Abaid
- Laboratory
of Hetero-Organic Compounds and Nanostructured Materials (LR18ES11),
Faculty of Sciences of Bizerte, University
of Carthage, Jarzouna 7021, Tunisia
- Univ
Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes)-UMR
6226, F-35000 Rennes, France
| | - William Erb
- Univ
Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes)-UMR
6226, F-35000 Rennes, France
| | - David Virieux
- Institut
Charles Gerhardt, CNRS UMR 5253, Ecole Nationale Supérieure
de Chimie de Montpellier, 8 Rue de l’Ecole Normale, 34
296 Montpellier, France
| | - Laurent Picot
- La
Rochelle Université, CNRS UMR 7266 Littoral Environnement et
Sociétés (LIENSs), F-17042 La Rochelle, France
| | - Benjamin Musnier
- La
Rochelle Université, CNRS UMR 7266 Littoral Environnement et
Sociétés (LIENSs), F-17042 La Rochelle, France
| | - Valérie Thiéry
- La
Rochelle Université, CNRS UMR 7266 Littoral Environnement et
Sociétés (LIENSs), F-17042 La Rochelle, France
| | - Thierry Roisnel
- Univ
Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes)-UMR
6226, F-35000 Rennes, France
| | - Florence Mongin
- Univ
Rennes, CNRS, ISCR (Institut des Sciences Chimiques de Rennes)-UMR
6226, F-35000 Rennes, France
| | - Soufiane Touil
- Laboratory
of Hetero-Organic Compounds and Nanostructured Materials (LR18ES11),
Faculty of Sciences of Bizerte, University
of Carthage, Jarzouna 7021, Tunisia
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2
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Feng Y, Viereck P, Li SG, Tsantrizos YS. Rh(I)-catalyzed asymmetric transfer hydrogenation of α-enamidophosphonates to α-aminophosphonates. Tetrahedron 2022. [DOI: 10.1016/j.tet.2022.132908] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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3
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Dai Y, Zheng L, Chakraborty D, Borhan B, Wulff WD. Zirconium-catalyzed asymmetric Kabachnik-Fields reactions of aromatic and aliphatic aldehydes. Chem Sci 2021; 12:12333-12345. [PMID: 34603663 PMCID: PMC8480333 DOI: 10.1039/d1sc03222d] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2021] [Accepted: 07/24/2021] [Indexed: 11/21/2022] Open
Abstract
An effective catalyst has been developed for the three-component reaction of aldehydes, anilines and phosphites in an asymmetric catalytic Kabachnik-Fields reaction to give α-aminophosphonates. A catalyst was sought that would give high asymmetric inductions for aromatic and, and more particularly, for aliphatic aldehydes since there has not previously been an effective catalyst developed for this class of aldehydes. The optimal catalyst is prepared from three equivalents of the 7,7'-di-t-butylVANOL ligand, one equivalent of N-methylimidazole and one equivalent of zirconium tetraisopropoxide. This catalyst was most efficient in the presence of 10 mol% benzoic acid. Optimal conditions for aryl aldehydes required the use of 3,5-diisopropyl-2-hydroxyaniline and gave the aryl α-aminophosphonates in up to 96% yield and 98% ee over 11 different aryl aldehydes. The best aniline for aliphatic aldehydes was found to be 3-t-butyl-2-hydroxyaniline and gave the corresponding phosphonates in up to 83% yield and 97% ee over 18 examples. The asymmetric inductions for aliphatic aldehydes were comparable with those for aromatic aldehydes with a mean induction of 90% ee for the former and 91% ee for the latter. The best method for the liberation of the free amine from the aniline substituted α-aminophosphonates involved oxidation with N-iodosuccinimide.
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Affiliation(s)
- Yijing Dai
- Department of Chemistry, Michigan State University East Lansing MI 48824 USA
| | - Li Zheng
- Department of Chemistry, Michigan State University East Lansing MI 48824 USA
| | | | - Babak Borhan
- Department of Chemistry, Michigan State University East Lansing MI 48824 USA
| | - William D Wulff
- Department of Chemistry, Michigan State University East Lansing MI 48824 USA
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4
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Affiliation(s)
- Zita Rádai
- Department of Organic Chemistry and Technology, Budapest University of Technology and Economics, Hungary
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Jiménez-Andreu MM, Lucía Quintana A, Aínsa JA, Sayago FJ, Cativiela C. Synthesis and biological activity of dehydrophos derivatives. Org Biomol Chem 2019; 17:1097-1112. [PMID: 30633297 DOI: 10.1039/c8ob03079k] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The synthesis of dehydrophos derivatives featuring modified peptide chains, characterized by the presence of substituents in the vinyl moiety, or possessing a phosphonic acid monoalkyl ester other than the monomethyl ester one, has been accomplished by a versatile procedure based on Horner-Wadsworth-Emmons olefination with suitable aldehydes and on the selective hydrolysis of the dialkyl phosphonate group. Such derivatives have been tested against a series of bacterial strains, using the naturally occurring peptide, dehydrophos, for comparison. Thus, the effects of the aforementioned structural variations on antimicrobial activity have been studied.
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Affiliation(s)
- M Mercedes Jiménez-Andreu
- Departamento de Química Orgánica, Instituto de Síntesis Química y Catálisis Homogénea ISQCH, CSIC-Universidad de Zaragoza, Zaragoza 50009, Spain.
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6
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Parkinson EI, Tryon JH, Goering AW, Ju KS, McClure RA, Kemball JD, Zhukovsky S, Labeda DP, Thomson RJ, Kelleher NL, Metcalf WW. Discovery of the Tyrobetaine Natural Products and Their Biosynthetic Gene Cluster via Metabologenomics. ACS Chem Biol 2018; 13:1029-1037. [PMID: 29510029 DOI: 10.1021/acschembio.7b01089] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Natural products (NPs) are a rich source of medicines, but traditional discovery methods are often unsuccessful due to high rates of rediscovery. Genetic approaches for NP discovery are promising, but progress has been slow due to the difficulty of identifying unique biosynthetic gene clusters (BGCs) and poor gene expression. We previously developed the metabologenomics method, which combines genomic and metabolomic data to discover new NPs and their BGCs. Here, we utilize metabologenomics in combination with molecular networking to discover a novel class of NPs, the tyrobetaines: nonribosomal peptides with an unusual trimethylammonium tyrosine residue. The BGC for this unusual class of compounds was identified using metabologenomics and computational structure prediction data. Heterologous expression confirmed the BGC and suggests an unusual mechanism for trimethylammonium formation. Overall, the discovery of the tyrobetaines shows the great potential of metabologenomics combined with molecular networking and computational structure prediction for identifying interesting biosynthetic reactions and novel NPs.
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Affiliation(s)
- Elizabeth I. Parkinson
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana−Champaign, Urbana, Illinois 61801, United States
| | - James H. Tryon
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Anthony W. Goering
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Kou-San Ju
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana−Champaign, Urbana, Illinois 61801, United States
| | - Ryan A. McClure
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Jeremy D. Kemball
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana−Champaign, Urbana, Illinois 61801, United States
| | - Sara Zhukovsky
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana−Champaign, Urbana, Illinois 61801, United States
| | - David P. Labeda
- Mycotoxin Prevention and Applied Microbiology Research Unit, USDA-ARS National Center for Agricultural Utilization Research, Peoria, Illinois 61604, United States
| | - Regan J. Thomson
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Neil L. Kelleher
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - William W. Metcalf
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana−Champaign, Urbana, Illinois 61801, United States
- Department of Microbiology, University of Illinois at Urbana−Champaign, Urbana, Illinois 61801 United States
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Cervera-Villanueva JMJ, Viveros-Ceballos JL, Linzaga-Elizalde I, Ordóñez M. Practical synthesis of novel phosphonopeptides containing AibP. J Pept Sci 2015; 22:70-5. [DOI: 10.1002/psc.2841] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2015] [Revised: 11/07/2015] [Accepted: 11/09/2015] [Indexed: 12/13/2022]
Affiliation(s)
| | - José Luis Viveros-Ceballos
- Secretaría Académica; Universidad Autónoma del Estado de Morelos; Av. Universidad 1001 62209 Cuernavaca Morelos Mexico
| | - Irma Linzaga-Elizalde
- Centro de Investigaciones Químicas CIQ-IICBA; Universidad Autónoma del Estado de Morelos; Av. Universidad 1001 62209 Cuernavaca Morelos Mexico
| | - Mario Ordóñez
- Centro de Investigaciones Químicas CIQ-IICBA; Universidad Autónoma del Estado de Morelos; Av. Universidad 1001 62209 Cuernavaca Morelos Mexico
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Kramer G, Mohd A, Schwager SLU, Masuyer G, Acharya KR, Sturrock ED, Bachmann BO. Interkingdom pharmacology of Angiotensin-I converting enzyme inhibitor phosphonates produced by actinomycetes. ACS Med Chem Lett 2014; 5:346-51. [PMID: 24900839 PMCID: PMC4027624 DOI: 10.1021/ml4004588] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2013] [Accepted: 02/04/2014] [Indexed: 11/30/2022] Open
Abstract
The K-26 family of bacterial secondary metabolites are N-modified tripeptides terminated by an unusual phosphonate analog of tyrosine. These natural products, produced via three different actinomycetales, are potent inhibitors of human angiotensin-I converting enzyme (ACE). Herein we investigate the interkingdom pharmacology of the K-26 family by synthesizing these metabolites and assessing their potency as inhibitors of both the N-terminal and C-terminal domains of human ACE. In most cases, selectivity for the C-terminal domain of ACE is displayed. Co-crystallization of K-26 in both domains of human ACE reveals the structural basis of the potent inhibition and has shown an unusual binding motif that may guide future design of domain-selective inhibitors. Finally, the activity of K-26 is assayed against a cohort of microbially produced ACE relatives. In contrast to the synthetic ACE inhibitor captopril, which demonstrates broad interkingdom inhibition of ACE-like enzymes, K-26 selectively targets the eukaryotic family.
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Affiliation(s)
- Glenna
J. Kramer
- Vanderbilt
University Department of Chemistry, 7300 Stevenson Center, Nashville, Tennessee 37204, United States
| | - Akif Mohd
- University
of Bath, Department of Biology & Biochemistry, Bath BA2 7AY, United Kingdom
| | - Sylva L. U. Schwager
- University
of Cape Town, The Division of Medical Biochemistry,
Institute of Infectious Disease and Molecular Medicine, Observatory 7925, South Africa
| | - Geoffrey Masuyer
- University
of Bath, Department of Biology & Biochemistry, Bath BA2 7AY, United Kingdom
| | - K. Ravi Acharya
- University
of Bath, Department of Biology & Biochemistry, Bath BA2 7AY, United Kingdom
| | - Edward D. Sturrock
- University
of Cape Town, The Division of Medical Biochemistry,
Institute of Infectious Disease and Molecular Medicine, Observatory 7925, South Africa
| | - Brian O. Bachmann
- Vanderbilt
University Department of Chemistry, 7300 Stevenson Center, Nashville, Tennessee 37204, United States
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Synthesis and biological evaluation of potential threonine synthase inhibitors: Rhizocticin A and Plumbemycin A. Bioorg Med Chem 2013; 21:4958-67. [DOI: 10.1016/j.bmc.2013.06.064] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2013] [Revised: 06/17/2013] [Accepted: 06/26/2013] [Indexed: 11/23/2022]
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11
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Revisiting the biosynthesis of dehydrophos reveals a tRNA-dependent pathway. Proc Natl Acad Sci U S A 2013; 110:10952-7. [PMID: 23776232 DOI: 10.1073/pnas.1303568110] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023] Open
Abstract
Bioactive natural products containing a C-P bond act as mimics of phosphate esters and carboxylic acids, thereby competing with these compounds for active sites of enzymes. Dehydrophos (DHP), a broad-spectrum antibiotic, is a phosphonotripeptide produced by Streptomyces luridus, in which glycine and leucine are linked to an aminophosphonate analog of dehydroalanine, ΔAla(P). This unique feature, in combination with the monomethylation of the phosphonic acid, renders DHP a Trojan horse type antibiotic because peptidase-mediated hydrolysis will release methyl acetylphosphonate, a potent inhibitor of pyruvate dehydrogenase. Bioinformatic analysis of the biosynthetic gene cluster suggested that ΔAla(P) would be generated from Ser(P), the phosphonate analog of Ser, by phosphorylation and subsequent elimination, and that ΔAla(P) would be condensed with Leu-tRNA(Leu). DhpH was anticipated to carry out this elimination/ligation cascade. DhpH is a multidomain protein, in which a pyridoxal phosphate binding domain is fused to an N-acetyltransferase domain related to the general control nonderepressible-5 (GCN5) family. In this work, the activity of DhpH was reconstituted in vitro. The enzyme was able to catalyze the β-elimination reaction of pSer(P) to generate ΔAla(P), but it was unable to condense ΔAla(P) with Leu. Instead, ΔAla(P) is hydrolyzed to acetyl phosphonate, which is converted to Ala(P) by a second pyridoxal phosphate-dependent enzyme, DhpD. Ala(P) is the substrate for the condensation with Leu-tRNA(Leu) catalyzed by the C-terminal domain of DhpH. DhpJ, a 2-oxoglutarate/Fe(II)-dependent enzyme, introduces the vinyl functionality into Leu-Ala(P) acting as a desaturase, and addition of Gly by DhpK in a Gly-tRNA(Gly)-dependent manner completes the in vitro biosynthesis of dehydrophos.
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12
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Mucha A, Kafarski P, Berlicki Ł. Remarkable potential of the α-aminophosphonate/phosphinate structural motif in medicinal chemistry. J Med Chem 2011; 54:5955-80. [PMID: 21780776 DOI: 10.1021/jm200587f] [Citation(s) in RCA: 476] [Impact Index Per Article: 36.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Artur Mucha
- Department of Bioorganic Chemistry, Faculty of Chemistry, Wrocław University of Technology, Wybrzeże Wyspiańskiego 27, 50-370 Wrocław, Poland
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Kantevari S, Addla D, Bagul PK, Sridhar B, Banerjee SK. Synthesis and evaluation of novel 2-butyl-4-chloro-1-methylimidazole embedded chalcones and pyrazoles as angiotensin converting enzyme (ACE) inhibitors. Bioorg Med Chem 2011; 19:4772-81. [DOI: 10.1016/j.bmc.2011.06.085] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2011] [Revised: 06/27/2011] [Accepted: 06/28/2011] [Indexed: 11/16/2022]
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Kuemin M, van der Donk WA. Structure-activity relationships of the phosphonate antibiotic dehydrophos. Chem Commun (Camb) 2010; 46:7694-6. [PMID: 20871915 DOI: 10.1039/c0cc02958k] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Synthetic derivatives of the phosphonate antibiotic dehydrophos were tested for antimicrobial activity. Both the phosphonate monomethyl ester and the vinyl phosphonate moiety proved to be important for bacteriocidal activity of the natural product.
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Affiliation(s)
- Michael Kuemin
- Department of Chemistry and Howard Hughes Medical Institute, University of Illinois at Urbana-Champaign, 600 S. Mathews Ave., Urbana, IL 61801, USA
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Akif M, Ntai I, Sturrock ED, Isaac RE, Bachmann BO, Acharya KR. Crystal structure of a phosphonotripeptide K-26 in complex with angiotensin converting enzyme homologue (AnCE) from Drosophila melanogaster. Biochem Biophys Res Commun 2010; 398:532-6. [DOI: 10.1016/j.bbrc.2010.06.113] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2010] [Accepted: 06/27/2010] [Indexed: 10/19/2022]
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Matveeva ED, Podrugina TA, Prisyazhnoi MV, Bachurin SO, Zefirov NS. Synthesis of a “memory tripeptide” (Arg—Glu—Arg, RER) and the Kabachnik—Fields reaction with di- and tripeptides as a method for the synthesis of phosphorus-containing peptide analogs. Russ Chem Bull 2010. [DOI: 10.1007/s11172-010-0063-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Discovery of novel phosphonate derivatives as hepatitis C virus NS3 protease inhibitors. Bioorg Med Chem Lett 2009; 19:3453-7. [DOI: 10.1016/j.bmcl.2009.05.023] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2009] [Revised: 05/04/2009] [Accepted: 05/06/2009] [Indexed: 11/20/2022]
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18
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Biological Activity of Aminophosphonic Acids and Their Short Peptides. TOPICS IN HETEROCYCLIC CHEMISTRY 2009. [DOI: 10.1007/7081_2008_14] [Citation(s) in RCA: 85] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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