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OGAWA S, KUNO S, TOYOKUNI T. Design and synthesis of biologically active carbaglycosylamines: From glycosidase inhibitors to pharmacological chaperones. PROCEEDINGS OF THE JAPAN ACADEMY. SERIES B, PHYSICAL AND BIOLOGICAL SCIENCES 2022; 98:336-360. [PMID: 35908956 PMCID: PMC9363598 DOI: 10.2183/pjab.98.018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/24/2022] [Accepted: 06/02/2022] [Indexed: 06/15/2023]
Abstract
For over 50 years, our group has been involved in synthetic studies on biologically active cyclitols including carbasugars. Among a variety of compounds synthesized, this review focuses on carbaglycosylamine glycosidase inhibitors, highlighting the following: (1) the naturally occurring N-linked carbaoligosaccharide α-amylase inhibitor acarbose and related compounds; (2) the novel synthetic β-glycosidase inhibitors, 1'-epi-acarviosin and its 6-hydroxy analogue as well as β-valienaminylceramide and its 4'-epimer; (3) the discovery of the β-glycosidase inhibitors with chaperone activity, N-octyl-β-valienamine (NOV) and its 4-epimer (NOEV); and (4) the recent development of the potential pharmacological chaperone N-alkyl-conduramine F-4 derivatives.
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Affiliation(s)
- Seiichiro OGAWA
- Department of Biosciences and Informatics, Faculty of Science and Technology, Keio University, Yokohama, Kanagawa, Japan
| | | | - Tatsushi TOYOKUNI
- Department of Biosciences and Informatics, Faculty of Science and Technology, Keio University, Yokohama, Kanagawa, Japan
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Široký M, Gonda J, Martinková M, Jacková D, Vilková M, Bindzár V, Kuchár J, Šesták S. Synthesis and mannosidase inhibitory profile of a small library of aminocyclitols from shikimic acid-derived scaffolds. Carbohydr Res 2020; 493:108027. [DOI: 10.1016/j.carres.2020.108027] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2020] [Revised: 04/28/2020] [Accepted: 04/28/2020] [Indexed: 12/18/2022]
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Zhu XL, Wang L, Luo YQ, He YG, Li FL, Sun MM, Liu SL, Shi XX. Efficient and Highly Stereoselective Syntheses of (+)- proto-Quercitol and (-)- gala-Quercitol Starting from the Naturally Abundant (-)-Shikimic Acid. ACS OMEGA 2020; 5:1813-1821. [PMID: 32039317 PMCID: PMC7003206 DOI: 10.1021/acsomega.9b02986] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2019] [Accepted: 12/05/2019] [Indexed: 05/03/2023]
Abstract
Efficient and highly stereoselective syntheses of (+)-proto-quercitol and (-)-gala-quercitol starting from the naturally abundant (-)-shikimic acid were described in this article. (-)-Shikimic acid was first converted to the key intermediate by eight steps in 53% yield. It was then converted to (+)-proto-quercitol by three steps in 78% yield and was also converted to (-)-gala-quercitol by five steps in 63% yield. In summary, (+)-proto-quercitol and (-)-gala-quercitol were synthesized from (-)-shikimic acid by 11 and 13 steps in 41 and 33% overall yields, respectively.
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Affiliation(s)
- Xing-Liang Zhu
- Shanghai
Key Laboratory of Chemical Biology and Department of Pharmaceutical
Engineering, School of Pharmacy, East China
University of Science and Technology, 130 Mei-Long Road, Shanghai 200237, P. R. China
| | - Lei Wang
- Shanghai
Key Laboratory of Chemical Biology and Department of Pharmaceutical
Engineering, School of Pharmacy, East China
University of Science and Technology, 130 Mei-Long Road, Shanghai 200237, P. R. China
| | - Yong-Qiang Luo
- Shanghai
Key Laboratory of Chemical Biology and Department of Pharmaceutical
Engineering, School of Pharmacy, East China
University of Science and Technology, 130 Mei-Long Road, Shanghai 200237, P. R. China
| | - Yun-Gang He
- Shanghai
Key Laboratory of Chemical Biology and Department of Pharmaceutical
Engineering, School of Pharmacy, East China
University of Science and Technology, 130 Mei-Long Road, Shanghai 200237, P. R. China
| | - Feng-Lei Li
- Shanghai
Key Laboratory of Chemical Biology and Department of Pharmaceutical
Engineering, School of Pharmacy, East China
University of Science and Technology, 130 Mei-Long Road, Shanghai 200237, P. R. China
| | - Mian-Mian Sun
- Shanghai
Key Laboratory of Chemical Biology and Department of Pharmaceutical
Engineering, School of Pharmacy, East China
University of Science and Technology, 130 Mei-Long Road, Shanghai 200237, P. R. China
| | - Shi-Ling Liu
- Shanghai
Qingping Pharmaceutical Co. Ltd., 397 Zhaojiang Road, Baihe Town, Qingpu District, Shanghai 201710, P. R.
China
- E-mail: (S.-L.L.)
| | - Xiao-Xin Shi
- Shanghai
Key Laboratory of Chemical Biology and Department of Pharmaceutical
Engineering, School of Pharmacy, East China
University of Science and Technology, 130 Mei-Long Road, Shanghai 200237, P. R. China
- E-mail: (X.-X.S.)
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Li FL, Yu JP, Ding W, Sun MM, He YG, Zhu XL, Liu SL, Shi XX. Novel stereoselective syntheses of N-octyl-β-valienamine (NOV) and N-octyl-4- epi-β-valienamine (NOEV) from (-)-shikimic acid. RSC Adv 2019; 9:42077-42084. [PMID: 35542836 PMCID: PMC9076550 DOI: 10.1039/c9ra09235h] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2019] [Accepted: 12/04/2019] [Indexed: 02/04/2023] Open
Abstract
N-Octyl-β-valienamine (NOV) 1 and N-octyl-4-epi-β-valienamine (NOEV) 2 are potent chemical chaperone drug candidates for the therapy of lysosomal storage disorders. Novel stereoselective syntheses of NOV 1 and NOEV 2 starting from naturally abundant (−)-shikimic acid are described in this article. The common key intermediate compound 5 was first synthesized from readily available (−)-shikimic acid via 9 steps in 50% yield. Compound 5 was then converted to NOV 1via 5 steps in 61% yield, and it was also converted to NOEV 2via 8 steps in 38% yield. In summary, NOV 1 was synthesized via 14 steps in 31% overall yield; and NOEV 2 was synthesized via 17 steps in 19% overall yield. Novel stereoselective syntheses of N-octyl-β-valienamine (NOV) 1 and N-octyl-4-epi-β-valienamine (NOEV) 2 starting from naturally abundant (−)-shikimic acid are described in this article.![]()
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Affiliation(s)
- Feng-Lei Li
- Engineering Research Center of Pharmaceutical Process Chemistry of the Ministry of Education, East China University of Science and Technology 130 Mei-Long Road Shanghai 200237 P. R. China
| | - Jiang-Ping Yu
- Engineering Research Center of Pharmaceutical Process Chemistry of the Ministry of Education, East China University of Science and Technology 130 Mei-Long Road Shanghai 200237 P. R. China
| | - Wei Ding
- Engineering Research Center of Pharmaceutical Process Chemistry of the Ministry of Education, East China University of Science and Technology 130 Mei-Long Road Shanghai 200237 P. R. China
| | - Mian-Mian Sun
- Engineering Research Center of Pharmaceutical Process Chemistry of the Ministry of Education, East China University of Science and Technology 130 Mei-Long Road Shanghai 200237 P. R. China
| | - Yun-Gang He
- Engineering Research Center of Pharmaceutical Process Chemistry of the Ministry of Education, East China University of Science and Technology 130 Mei-Long Road Shanghai 200237 P. R. China
| | - Xing-Liang Zhu
- Engineering Research Center of Pharmaceutical Process Chemistry of the Ministry of Education, East China University of Science and Technology 130 Mei-Long Road Shanghai 200237 P. R. China
| | - Shi-Ling Liu
- Shanghai Qingping Pharmaceutical Co. Ltd. 397 Zhao-Jiang Road, Baihe Town, Qingpu District Shanghai 201710 P. R. China
| | - Xiao-Xin Shi
- Engineering Research Center of Pharmaceutical Process Chemistry of the Ministry of Education, East China University of Science and Technology 130 Mei-Long Road Shanghai 200237 P. R. China
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Itoh N. Biosynthesis and production of quercitols and their application in the production of pharmaceuticals: current status and prospects. Appl Microbiol Biotechnol 2018; 102:4641-4651. [PMID: 29663050 DOI: 10.1007/s00253-018-8972-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2018] [Revised: 03/23/2018] [Accepted: 03/24/2018] [Indexed: 10/17/2022]
Abstract
(-)-vibo-Quercitol is a deoxyinositol (1L-1,2,4/3,5-cyclohexanepentol) that occurs naturally in low concentrations in oak species, honeydew honey, and Gymnema sylvestre. The author's research group recently reported that (-)-vibo-quercitol and scyllo-quercitol (2-deoxy-myo-inositol, 1,3,5/2,4-cyclohexanepentol), a stereoisomer of (-)-vibo-quercitol, are stereoselectively synthesized from 2-deoxy-scyllo-inosose by the reductive reaction of a novel (-)-vibo-quercitol 1-dehydrogenase in Burkholderia terrae and of a known scyllo-inositol dehydrogenase in Bacillus subtilis, respectively. The author's research group therefore identified two enzymes capable of producing both stereoisomers of deoxyinositols, which are rare in nature. (-)-vibo-Quercitol and scyllo-quercitol are potential intermediates for pharmaceuticals. In this review, the author describes the biosynthesis and enzymatic production of quercitols and myo-inositol stereoisomers and their application in the production of potential pharmaceuticals.
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Affiliation(s)
- Nobuya Itoh
- Biotechnology Research Center and Department of Biotechnology, Toyama Prefectural University, 5180 Kurokawa, Imizu, Toyama, 939-0398, Japan.
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Identification and characterization of a novel (-)-vibo-quercitol 1-dehydrogenase from Burkholderia terrae suitable for production of (-)-vibo-quercitol from 2-deoxy-scyllo-inosose. Appl Microbiol Biotechnol 2017; 101:7545-7555. [PMID: 28905086 DOI: 10.1007/s00253-017-8483-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2017] [Revised: 07/17/2017] [Accepted: 08/09/2017] [Indexed: 10/18/2022]
Abstract
(-)-vibo-Quercitol is a deoxyinositol (1L-1,2,4/3,5-cyclohexanepentol) that naturally occurs in oak species, honeydew honey, wines aged in oak barrels, and Gymnema sylvestre and is a potential intermediate for pharmaceuticals. We found that (-)-vibo-quercitol is stereoselectively synthesized from 2-deoxy-scyllo-inosose by the reductive reaction of a novel (-)-vibo-quercitol 1-dehydrogenase found in the proteomes of Burkholderia, Pseudomonas, and Arthrobacter. Among them, Burkholderia terrae sp. AKC-020 (40-1) produced a (-)-vibo-quercitol 1-dehydrogenase appropriate for synthesizing (-)-vibo-quercitol with a high diastereomeric excess. The enzyme was strongly induced in Bu. terrae cells when quercitol or 2-deoxy-scyllo-inosose was used as carbon source in the culture medium. The enzyme is NAD(H)-dependent and shows highly specific activity for (-)-vibo-quercitol and myo-inositol among the substrates tested. The enzyme gene (qudh) was obtained by PCR using degenerate primers based on the N-terminal and internal amino acid sequences of the purified enzyme, followed by thermal asymmetric interlaced PCR. The qudh gene showed homology with inositol 2-dehydrogenase (sharing 49.5% amino acid identity with IdhA from Sinorhizobium meliloti 1021). We successfully produced several recombinant (-)-vibo-quercitol 1-dehydrogenases and related enzymes identified by genome database mining using an Escherichia coli expression system. This revealed that scyllo-inositol dehydrogenase (IolX) in Bacillus subtilis can catalyze the reduction of 2-deoxy-scyllo-inosose to yield scyllo-quercitol, a stereoisomer of (-)-vibo-quercitol. Thus, we successfully identified two enzymes to produce both stereoisomers of deoxyinositols that are rare in nature.
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Abstract
The first synthesis of carbasugars, compounds in which the ring oxygen of a monosaccharide had been replaced by a methylene moiety, was described in 1966 by Professor G. E. McCasland’s group. Seven years later, the first true natural carbasugar (5a-carba-R-D-galactopyranose) was isolated from a fermentation broth of Streptomyces sp. MA-4145. In the following decades, the chemistry and biology of carbasugars have been extensively studied. Most of these compounds show interesting biological properties, especially enzymatic inhibitory activities, and, in consequence, an important number of analogues have also been prepared in the search for improved biological activities. The aim of this review is to give coverage on the progress made in two important aspects of these compounds: the elucidation of their biosynthesis and the consideration of their biological properties, including the extensively studied carbapyranoses as well as the much less studied carbafuranoses.
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Kuno S, Ogawa S. From Quercitols to Biologically Active Valienamine and Conduramine Derivatives: Development of Pharmacological Chaperones. TRENDS GLYCOSCI GLYC 2016. [DOI: 10.4052/tigg.1435.1e] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Shinichi Kuno
- Central Research Laboratories, Hokko Chemical Industry, Co., Ltd
| | - Seiichiro Ogawa
- Department of Biosciences and Informatics, Faculty of Science and Technology, Keio University
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Kuno S, Ogawa S. From Quercitols to Biologically Active Valienamine and Conduramine Derivatives: Development of Pharmacological Chaperones. TRENDS GLYCOSCI GLYC 2016. [DOI: 10.4052/tigg.1435.1j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Affiliation(s)
- Shinichi Kuno
- Central Research Laboratories, Hokko Chemical Industry, Co., Ltd
| | - Seiichiro Ogawa
- Department of Biosciences and Informatics, Faculty of Science and Technology, Keio University
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Worawalai W, Wacharasindhu S, Phuwapraisirisan P. Amine-linked diquercitols as new α-glucosidase inhibitors. Bioorg Med Chem Lett 2014; 24:5530-3. [DOI: 10.1016/j.bmcl.2014.09.064] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2014] [Revised: 09/08/2014] [Accepted: 09/24/2014] [Indexed: 10/24/2022]
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Kuno S, Takahashi A, Ogawa S. Concise syntheses of potent chaperone drug candidates, N-octyl-4-epi-β-valinenamine (NOEV) and its 6-deoxy derivative, from (+)-proto-quercitol. Carbohydr Res 2012; 368:8-15. [PMID: 23314299 DOI: 10.1016/j.carres.2012.12.010] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2012] [Revised: 12/07/2012] [Accepted: 12/08/2012] [Indexed: 10/27/2022]
Abstract
Described are the efficient syntheses of β-galactose-type unsaturated carbasugar amine, N-octyl-4-epi-β-valienamine (1a, NOEV) and 6-deoxy NOEV (12), starting from (+)-proto-quercitol (2), which is readily provided by the bioconversion of myo-inositol. NOEV is a potent chemical chaperone drug candidate for G(M1)-gangliosidosis. An intermediate alkadiene benzoate was prepared from 2 in five steps, with the key step being a Wittig reaction with an enol ester. The 6-deoxy derivative 12 was conveniently synthesized from the versatile intermediate dibromo compound 6, which was also an intermediate in the synthesis of NOEV. Enzyme inhibition assays demonstrated that 12 possessed stronger inhibitory activity than the parent 1a, suggesting that the C-6 position of the 4-epi-β-valienamine-type inhibitor could have hydrophobic interactions at the β-galactosidase active site residues.
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Affiliation(s)
- Shinichi Kuno
- Central Research Laboratories, Hokko Chemical Industry, Co., Ltd, Toda, Atsugi 243-0023, Japan.
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12
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Worawalai W, Wacharasindhu S, Phuwapraisirisan P. Synthesis of new N-substituted aminoquercitols from naturally available (+)-proto-quercitol and their α-glucosidase inhibitory activity. MEDCHEMCOMM 2012. [DOI: 10.1039/c2md20227a] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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