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Zhang S, Chen Y, Zhu J, Lu Q, Cryle MJ, Zhang Y, Yan F. Structural diversity, biosynthesis, and biological functions of lipopeptides from Streptomyces. Nat Prod Rep 2023; 40:557-594. [PMID: 36484454 DOI: 10.1039/d2np00044j] [Citation(s) in RCA: 16] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Covering: up to 2022Streptomyces are ubiquitous in terrestrial and marine environments, where they display a fascinating metabolic diversity. As a result, these bacteria are a prolific source of active natural products. One important class of these natural products is the nonribosomal lipopeptides, which have diverse biological activities and play important roles in the lifestyle of Streptomyces. The importance of this class is highlighted by the use of related antibiotics in the clinic, such as daptomycin (tradename Cubicin). By virtue of recent advances spanning chemistry and biology, significant progress has been made in biosynthetic studies on the lipopeptide antibiotics produced by Streptomyces. This review will serve as a comprehensive guide for researchers working in this multidisciplinary field, providing a summary of recent progress regarding the investigation of lipopeptides from Streptomyces. In particular, we highlight the structures, properties, biosynthetic mechanisms, chemical and chemoenzymatic synthesis, and biological functions of lipopeptides. In addition, the application of genome mining techniques to Streptomyces that have led to the discovery of many novel lipopeptides is discussed, further demonstrating the potential of lipopeptides from Streptomyces for future development in modern medicine.
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Affiliation(s)
- Songya Zhang
- CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Yunliang Chen
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong 266237, China.
- The Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 1000050, China.
| | - Jing Zhu
- CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Qiujie Lu
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong 266237, China.
| | - Max J Cryle
- Department of Biochemistry and Molecular Biology, Monash Biomedicine Discovery Institute, Monash University, Clayton, Victoria, 3800 Australia
- EMBL Australia, Monash University, Clayton, Victoria, 3800 Australia
- ARC Centre of Excellence for Innovations in Peptide and Protein Science, Monash University, Clayton, Victoria, 3800 Australia
| | - Youming Zhang
- CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong 266237, China.
| | - Fu Yan
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong 266237, China.
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Zhou Y, Liang XW. Recent applications of solid-phase strategy in total synthesis of antibiotics. RSC Adv 2021; 11:37942-37951. [PMID: 35498098 PMCID: PMC9043915 DOI: 10.1039/d1ra07503a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2021] [Accepted: 11/11/2021] [Indexed: 12/30/2022] Open
Abstract
Antibiotics produced by soil microorganisms have been widespread and have cured the most prevalent diseases since 1940s. However, recent bacterial resistance to existing antibacterial drugs is causing a public health crisis. The structure–activity relationship of antibiotics needs to be established to search for existing antibiotics-based next-generation drug candidates that can conquer the challenge of bacterial resistance preparedness, which relies on the development of highly efficient total synthesis strategies. The solid-phase strategy has become important to circumvent tedious intermediate isolation and purification procedures with simple filtrations. This review will give a brief overview of recent applications of solid-phase strategy in the total synthesis of antibiotics. The recent applications of solid-phase strategy in total synthesis of antibiotics were summarized, and the structure–activity relationship could be established to conquer the challenge of bacterial resistance preparedness.![]()
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Affiliation(s)
- Yuxin Zhou
- Jinling High School 169 Zhongshan Road Nanjing Jiangsu 210005 China
| | - Xiao-Wei Liang
- Hunan Key Laboratory of Skin Cancer and Psoriasis, Xiangya Hospital, Central South University Changsha 410008 China .,National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Central South University Changsha 410013 China
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Vázquez A, Bonilla-Reyes E, Sánchez-Carrillo A. Synthesis of l-Kynurenine and Homo-l-Kynurenine via an Aza-Fries Rearrangement. SYNTHESIS-STUTTGART 2020. [DOI: 10.1055/s-0040-1707223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
l-Kynurenine, a non-proteinogenic amino acid, is the primary metabolite of tryptophan via the kynurenine pathway. Kynurenine is involved in a variety of biological processes occurring in the human body, notably in the central nervous system. Thus, the study of this molecule offers multiple opportunities for drug discovery; however, an essential prelude for biological studies is to secure the supply of kynurenine and analogues thereof. A simple synthetic procedure for the efficient preparation of enantiomerically pure l-kynurenine from l-aspartic acid and its implementation to prepare homo-l-kynurenine from l-glutamic acid is presented. The approach relies on a photochemical aza-Fries rearrangement of the corresponding acyl-aniline as the fundamental transformation.
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Affiliation(s)
- Alfredo Vázquez
- Departamento de Química Orgánica, Facultad de Química, Universidad Nacional Autónoma de México
| | - Edgar Bonilla-Reyes
- Departamento de Química Orgánica, Facultad de Química, Universidad Nacional Autónoma de México
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Lu X, Bai Y, Li Y, Shi Y, Li L, Wu Y, Zhong F. Assembly of C3a-Peroxylated Pyrroloindolines via Interrupted Witkop Oxidation. Org Lett 2018; 20:7937-7941. [DOI: 10.1021/acs.orglett.8b03509] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Xunbo Lu
- Hubei Key Laboratory of Bioinorganic Chemistry & Materia Medica, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Road, Wuhan 430074, China
| | - Yulong Bai
- Hubei Key Laboratory of Bioinorganic Chemistry & Materia Medica, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Road, Wuhan 430074, China
| | - Yan Li
- Hubei Key Laboratory of Bioinorganic Chemistry & Materia Medica, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Road, Wuhan 430074, China
| | - Yufeng Shi
- Hubei Key Laboratory of Bioinorganic Chemistry & Materia Medica, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Road, Wuhan 430074, China
| | - Longjie Li
- Hubei Key Laboratory of Bioinorganic Chemistry & Materia Medica, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Road, Wuhan 430074, China
| | - Yuzhou Wu
- Hubei Key Laboratory of Bioinorganic Chemistry & Materia Medica, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Road, Wuhan 430074, China
| | - Fangrui Zhong
- Hubei Key Laboratory of Bioinorganic Chemistry & Materia Medica, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Road, Wuhan 430074, China
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Nian SY, Wang GP, Jiang ZL, Xiao Y, Huang MH, Zhou YH, Tan XD. Synthesis and biological evaluation of novel SIPI-7623 derivatives as farnesoid X receptor (FXR) antagonists. Mol Divers 2018; 23:19-33. [PMID: 29974364 DOI: 10.1007/s11030-018-9843-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2017] [Accepted: 06/13/2018] [Indexed: 12/13/2022]
Abstract
Most of reported steroidal FXR antagonists are restricted due to low potency. We described the design and synthesis of novel nonsteroidal scaffold SIPI-7623 derivatives as FXR antagonists. The most potent compound A-11 (IC50 = 7.8 ± 1.1 μM) showed better activity compared to SIPI-7623 (IC50 = 40.8 ± 1.7 μM) and guggulsterone (IC50 = 45.9 ± 1.1 μM). Docking of A-11 in FXR's ligand-binding domain was also studied.
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Affiliation(s)
- Si-Yun Nian
- Department of Clinical Pharmacy, Taizhou Hospital of Zhejiang Province, Xi Men Street No. 150, Linhai, 317000, Zhejiang Province, China.,Shanghai Institute of Pharmaceutical Industry, China State Institute of Pharmaceutical Industry, Shanghai, 201203, China.,Aurisco Pharmaceutical (Yangzhou) Co., Ltd., Yangzhou, 225100, China
| | - Guo-Ping Wang
- Shanghai Institute of Pharmaceutical Industry, China State Institute of Pharmaceutical Industry, Shanghai, 201203, China.,Aurisco Pharmaceutical (Yangzhou) Co., Ltd., Yangzhou, 225100, China
| | - Zheng-Li Jiang
- Department of Clinical Pharmacy, Taizhou Hospital of Zhejiang Province, Xi Men Street No. 150, Linhai, 317000, Zhejiang Province, China
| | - Ying Xiao
- Shanghai Institute of Pharmaceutical Industry, China State Institute of Pharmaceutical Industry, Shanghai, 201203, China
| | - Mo-Han Huang
- College of Pharmacy, Guilin Medical University, Guilin, 541004, China
| | - Yi-Huan Zhou
- College of Pharmacy, Guilin Medical University, Guilin, 541004, China
| | - Xiang-Duan Tan
- College of Pharmacy, Guilin Medical University, Guilin, 541004, China.
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Klare HFT, Goldberg AFG, Duquette DC, Stoltz BM. Oxidative Fragmentations and Skeletal Rearrangements of Oxindole Derivatives. Org Lett 2017; 19:988-991. [DOI: 10.1021/acs.orglett.6b03789] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Hendrik F. T. Klare
- The Warren and Katharine
Schlinger Laboratory for Chemistry and Chemical Engineering, Division
of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Alexander F. G. Goldberg
- The Warren and Katharine
Schlinger Laboratory for Chemistry and Chemical Engineering, Division
of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Douglas C. Duquette
- The Warren and Katharine
Schlinger Laboratory for Chemistry and Chemical Engineering, Division
of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Brian M. Stoltz
- The Warren and Katharine
Schlinger Laboratory for Chemistry and Chemical Engineering, Division
of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
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7
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Lam HY, Gaarden RI, Li X. A Journey to the Total Synthesis of Daptomycin. CHEM REC 2014; 14:1086-99. [PMID: 25205345 DOI: 10.1002/tcr.201402049] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2014] [Indexed: 01/14/2023]
Affiliation(s)
- Hiu Yung Lam
- Department of Chemistry; The University of Hong Kong; Hong Kong SAR P. R. China
| | | | - Xuechen Li
- Department of Chemistry; The University of Hong Kong; Hong Kong SAR P. R. China
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Lam HY, Zhang Y, Liu H, Xu J, Wong CTT, Xu C, Li X. Total Synthesis of Daptomycin by Cyclization via a Chemoselective Serine Ligation. J Am Chem Soc 2013; 135:6272-9. [DOI: 10.1021/ja4012468] [Citation(s) in RCA: 106] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Hiu Yung Lam
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, People’s
Republic of China
| | - Yinfeng Zhang
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, People’s
Republic of China
| | - Han Liu
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, People’s
Republic of China
| | - Jianchao Xu
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, People’s
Republic of China
| | - Clarence T. T. Wong
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, People’s
Republic of China
| | - Ci Xu
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, People’s
Republic of China
| | - Xuechen Li
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, People’s
Republic of China
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Kleijn LH, Müskens FM, Oppedijk SF, de Bruin G, Martin NI. A concise preparation of the non-proteinogenic amino acid l-kynurenine. Tetrahedron Lett 2012. [DOI: 10.1016/j.tetlet.2012.09.055] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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