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Orhan F, Senturk M, Genisel M. A new carbonic anhydrase identified in the Gram-negative bacterium (Chromohalobacter sp.) and the interaction of anions with the enzyme. Comp Biochem Physiol C Toxicol Pharmacol 2022; 254:109290. [PMID: 35114393 DOI: 10.1016/j.cbpc.2022.109290] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/16/2021] [Revised: 01/20/2022] [Accepted: 01/26/2022] [Indexed: 11/19/2022]
Abstract
In this study, the characterization and inhibition characteristic of α-class carbonic anhydrase from Chromohalobacter (ChCA) was documented for the first time. The carbonic anhydrase enzyme had 47.77% yield and 54.45-fold purity. The specific activity of the enzyme was determined as 318.52 U/mg proteins. Alternative substrate (4-nitrophenyl trifluoroacetate, 4-nitrophenyl phosphate, 4-nitrophenyl sulphate and 4-nitrophenyl acetate) were tested for the enzyme. KM and Vmax values for 4-nitrophenyl acetate were 4.57 mM and 4.29 EU/mL and for 4-nitrophenyl trifluoroacetate were 2.39 mM and 2.41 EU/mL. The anions, Cl-, NO2-, NO3-, Br-, ClO3-, ClO4-, I-, CO32- and SO42-, inhibited the ChCA hydratase activity. Among nine anions, the strongest inhibitor activities were obtained with micro molar concentrations of NO2-, NO3-, Br-, I-, CO32- (KI values of 160-255 μM). Other four anions tested (Cl-, ClO3-, ClO4- and SO42-) showed moderate inhibitory activities (KI values of 680-813.5 μM). The results obtained demonstrate that the anions we tested inhibit the Chromohalobacter CA (ChCA) enzyme as in other α-CAs in mammals; however, the susceptibility of ChCA resulted from anions differed significantly from that of other organism CAs.
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Affiliation(s)
- Furkan Orhan
- Agri Ibrahim Cecen University, Art and Science Faculty, Molecular Biology Department, 4100 Agri, Turkey; Agri Ibrahim Cecen University, Central Research and Application Laboratory, 4100 Agri, Turkey.
| | - Murat Senturk
- Agri Ibrahim Cecen University, Pharmacy Faculty, Department of Biochemistry, 4100 Agri, Turkey
| | - Mucip Genisel
- Agri Ibrahim Cecen University, Central Research and Application Laboratory, 4100 Agri, Turkey; Agri Ibrahim Cecen University, Pharmacy Faculty, Department of Pharmaceutical Botany, 04100 Agri, Turkey
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Study of glycation process of human carbonic anhydrase II as well as investigation concerning inhibitory influence of 3-beta-hydroxybutyrate on it. Int J Biol Macromol 2020; 149:443-449. [PMID: 31978481 DOI: 10.1016/j.ijbiomac.2020.01.192] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2019] [Revised: 01/12/2020] [Accepted: 01/20/2020] [Indexed: 12/16/2022]
Abstract
Glycation is a non-enzymatic reaction between carbonyl groups in sugar and free amino groups in proteins. This reaction leads to changes in structure and functions of proteins in which the advanced glycation end products (AGEs) are the final outcome and cause many complications in diabetic patients. We herein examined the effect of fasting on the glycation process of human Carbonic anhydrase II under physiological conditions (37 °C and pH 7.4) employing various techniques, including Ultraviolet-visible spectroscopy, fluorescence spectroscopy and CD Spectroscopy. We found an increased 3-beta-hydroxybutyrate upon fasting. We studied various samples of control carbonic anhydrase (without glucose and 3-beta-hydroxybutyrate), carbonic anhydrase with glucose, carbonic anhydrase treated with 3-beta-hydroxybutyrate (BHB) and carbonic anhydrase along with glucose and 3-beta-hydroxybutyrate. The samples were incubated for 35 days under physiological conditions. Our results indicated that 3-beta-hydroxybutyrate inhibited the glycation process, decreased glucose binding to the protein, prevented the formation of AGEs, and modified the enzyme activity. Our findings would open new windows toward the enzymatic procedure which would have profound implication in understanding the diabetes mechanisms.
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Jo BH, Im SK, Cha HJ. Halotolerant carbonic anhydrase with unusual N-terminal extension from marine Hydrogenovibrio marinus as novel biocatalyst for carbon sequestration under high-salt environments. J CO2 UTIL 2018. [DOI: 10.1016/j.jcou.2018.05.030] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Yılmaz S, Akbaba Y, Özgeriş B, Köse LP, Göksu S, Gülçin İ, Alwasel SH, Supuran CT. Synthesis and inhibitory properties of some carbamates on carbonic anhydrase and acetylcholine esterase. J Enzyme Inhib Med Chem 2016; 31:1484-91. [PMID: 26985691 DOI: 10.3109/14756366.2016.1149477] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
A series of carbamate derivatives were synthesized and their carbonic anhydrase I and II isoenzymes and acetylcholinesterase enzyme (AChE) inhibitory effects were investigated. All carbamates were synthesized from the corresponding carboxylic acids via the Curtius reactions of the acids with diphenyl phosphoryl azide followed by addition of benzyl alcohol. The carbamates were determined to be very good inhibitors against for AChE and hCA I, and II isoenzymes. AChE inhibition was determined in the range 0.209-0.291 nM. On the other hand, tacrine, which is used in the treatment of Alzheimer's disease possessed lower inhibition effect (Ki: 0.398 nM). Also, hCA I and II isoenzymes were effectively inhibited by the carbamates, with inhibition constants (Ki) in the range of 4.49-5.61 nM for hCA I, and 4.94-7.66 nM for hCA II, respectively. Acetazolamide, which was clinically used carbonic anhydrase (CA) inhibitor demonstrated Ki values of 281.33 nM for hCA I and 9.07 nM for hCA II. The results clearly showed that AChE and both CA isoenzymes were effectively inhibited by carbamates at the low nanomolar levels.
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Affiliation(s)
- Süleyman Yılmaz
- a Department of Chemistry , Faculty of Science, Atatürk University , Erzurum , Turkey
| | - Yusuf Akbaba
- a Department of Chemistry , Faculty of Science, Atatürk University , Erzurum , Turkey .,b Department of Basic Science , Faculty of Science, Erzurum Technical University , Erzurum , Turkey
| | - Bünyamin Özgeriş
- a Department of Chemistry , Faculty of Science, Atatürk University , Erzurum , Turkey .,b Department of Basic Science , Faculty of Science, Erzurum Technical University , Erzurum , Turkey
| | - Leyla Polat Köse
- a Department of Chemistry , Faculty of Science, Atatürk University , Erzurum , Turkey
| | - Süleyman Göksu
- a Department of Chemistry , Faculty of Science, Atatürk University , Erzurum , Turkey
| | - İlhami Gülçin
- a Department of Chemistry , Faculty of Science, Atatürk University , Erzurum , Turkey .,c Department of Zoology , College of Science, King Saud University , Riyadh , Saudi Arabia
| | - Saleh H Alwasel
- c Department of Zoology , College of Science, King Saud University , Riyadh , Saudi Arabia
| | - Claudiu T Supuran
- d Dipartimento di Chimica Ugo Schiff, Universita Degli Studi di Firenze , Sesto Fiorentino , Firenze , Italy , and.,e Neurofarba Department, Section of Pharmaceutical and Nutriceutical Sciences, Universita Degli Studi di Firenze , Sesto Fiorentino , Florence , Italy
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Mahon BP, Bhatt A, Vullo D, Supuran CT, McKenna R. Exploration of anionic inhibition of the α-carbonic anhydrase from Thiomicrospira crunogena XCL-2 gammaproteobacterium: A potential bio-catalytic agent for industrial CO2 removal. Chem Eng Sci 2015. [DOI: 10.1016/j.ces.2015.07.030] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Orhan F, Şentürk M, Supuran CT. Interaction of anions with a newly characterized alpha carbonic anhydrase from Halomonas sp. J Enzyme Inhib Med Chem 2015; 31:1119-23. [DOI: 10.3109/14756366.2015.1100177] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Affiliation(s)
- Furkan Orhan
- Central Research and Application Laboratory,
- Vocational School,
| | - Murat Şentürk
- Central Research and Application Laboratory,
- Art and Science Faculty, Chemistry Department, Ağri İbrahim Çeçen University, Ağri, Turkey, and
| | - Claudiu T. Supuran
- Laboratorio Di Chimica Bioinorganica, Polo Scientifico, Università Degli Studi Di Firenze, Florence, Italy
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